version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 781 37.71 0 830975..831454 - 159 71280788 - CPS_0814 - hypothetical protein 782 40.10 0 831656..832483 + 275 71278512 - CPS_0815 - AraC family transcriptional regulator 783 39.66 0 832573..833442 - 289 71277995 - CPS_0816 - LysR family transcriptional regulator 784 40.50 0 833593..834723 + 376 71279579 - CPS_0817 - alcohol dehydrogenase, class III 785 35.29 0 834656..834910 - 84 71279052 - CPS_0818 - hypothetical protein 786 42.25 +1 834833..835684 + 283 71279566 - CPS_0819 - putative esterase 787 35.73 0 835988..836989 + 333 71281361 - CPS_0820 - GGDEF domain-containing protein 788 42.95 +1 837156..837800 - 214 71280526 - CPS_0821 - hypothetical protein 789 33.33 -1 837863..838009 - 48 71282270 - CPS_0822 - hypothetical protein 790 35.07 0 838190..838534 + 114 71278039 - CPS_0823 - transcriptional regulator 791 39.45 0 838732..839499 + 255 71279837 - CPS_0824 - short chain dehydrogenase/reductase family oxidoreductase 792 34.09 -1 839471..839602 + 43 71278762 - CPS_0825 - hypothetical protein 793 42.18 +1 839604..841073 - 489 71278086 - CPS_0826 - dihydrolipoamide dehydrogenase 794 35.93 0 841106..841375 - 89 71280173 - CPS_0827 - putative glutaredoxin 795 37.76 0 841607..842578 - 323 71279493 - CPS_0828 - alpha/beta fold family hydrolase 796 36.21 0 842614..842856 - 80 71280925 - CPS_0829 - glutaredoxin 797 40.38 0 843111..843323 + 70 71280412 - CPS_0830 - hypothetical protein 798 43.32 +1 843350..844240 + 296 71282316 - CPS_0831 - LysR family transcriptional regulator 799 41.38 0 844312..845268 - 318 71278676 - CPS_0832 - hypothetical protein 800 33.51 -1 845730..846281 + 183 71279115 - CPS_0833 - hypothetical protein 801 38.11 0 846426..848372 + 648 71282506 - CPS_0834 - hypothetical protein 802 41.12 0 848775..849827 + 350 71281650 - CPS_0835 - hypothetical protein 803 28.95 -2 849896..850009 + 37 71281280 - CPS_0836 - hypothetical protein 804 38.84 0 849906..850958 + 350 71280765 - CPS_0837 - hypothetical protein 805 41.04 0 851096..853432 - 778 71281320 - CPS_0838 - aminotransferase, class V 806 38.44 0 853812..854672 + 286 71277967 - CPS_0839 - sodium/bile acid symporter family protein 807 37.97 0 854677..855669 - 330 71279736 - CPS_0840 - AraC family transcriptional regulator 808 39.26 0 855958..857712 + 584 71281770 atsA CPS_0841 - arylsulfatase 809 41.59 +1 857865..859814 + 649 71278610 - CPS_0842 - putative surface protein 810 29.44 -2 859906..860085 - 59 71281351 - CPS_0843 - hypothetical protein 811 38.60 0 860021..861103 + 360 71280220 - CPS_0844 - putative lipoprotein 812 44.79 +1 861296..861583 + 95 71279972 - CPS_0845 - hypothetical protein 813 37.71 0 861645..862580 + 311 71279471 - CPS_0846 - hypothetical protein 814 37.02 0 862583..863368 + 261 71279174 - CPS_0847 - hypothetical protein 815 39.10 0 863474..864670 - 398 71278489 hmpA CPS_0848 - nitric oxide dioxygenase 816 39.39 0 864748..866034 - 428 71277812 - CPS_0849 - putative ATP synthase F0, A subunit 817 35.90 0 866036..866308 - 90 71280777 - CPS_0850 - hypothetical protein 818 42.55 +1 866544..868127 + 527 71282073 - CPS_0851 - anaerobic nitric oxide reductase transcription regulator 819 35.00 0 868124..868423 - 99 71281986 - CPS_0852 - hypothetical protein 820 39.04 0 868844..869737 - 297 71280250 - CPS_0853 - putative glycine cleavage operon activator 821 42.37 +1 870022..871338 - 438 71281641 - CPS_0854 - amidohydrolase family protein 822 35.04 0 871431..871547 + 38 71279176 - CPS_0855 - hypothetical protein 823 37.89 0 871874..873607 - 577 71279865 - CPS_0856 - M16 family metallopeptidase 824 39.49 0 873604..874740 - 378 71280570 pqqE CPS_0857 - pyrroloquinoline quinone biosynthesis protein PqqE 825 35.53 0 874733..875005 - 90 71281262 pqqD CPS_0858 - pyrroloquinoline quinone biosynthesis protein PqqD 826 41.27 0 875002..875757 - 251 71282639 pqqC CPS_0859 - pyrroloquinoline quinone biosynthesis protein PqqC 827 41.98 +1 875726..875887 - 53 71279201 - CPS_0860 - hypothetical protein 828 41.07 0 876088..877005 - 305 71279293 pqqB CPS_0861 - pyrroloquinoline quinone biosynthesis protein PqqB 829 31.94 -1 877244..877315 - 23 71279223 pqqA CPS_0862 - coenzyme PQQ biosynthesis protein A 830 38.56 0 877425..878381 - 318 71278187 pip1 CPS_0863 - proline iminopeptidase 831 37.30 0 878843..879094 - 83 71281975 rpsQ CPS_0864 - ribosomal protein S17 832 38.54 0 879094..879285 - 63 71278351 rpmC CPS_0865 - ribosomal protein L29 833 43.48 +1 879285..879698 - 137 71280332 rplP CPS_0866 - 50S ribosomal protein L16 834 43.82 +1 879710..880405 - 231 71282222 rpsC CPS_0867 - ribosomal protein S3 835 40.84 0 880418..880750 - 110 71281105 rplV CPS_0868 - ribosomal protein L22 836 43.48 +1 880762..881037 - 91 71281186 rpsS CPS_0869 - 30S ribosomal protein S19 837 45.21 +2 881119..881943 - 274 71279504 rplB CPS_0870 - 50S ribosomal protein L2 838 39.60 0 881956..882258 - 100 71279906 rplW CPS_0871 - 50S ribosomal protein L23 839 42.24 +1 882255..882860 - 201 71278848 rplD CPS_0872 - 50S ribosomal protein L4 840 42.72 +1 882877..883515 - 212 71278595 rplC CPS_0873 - ribosomal protein L3 841 41.67 +1 883530..883841 - 103 71278063 rpsJ CPS_0874 - ribosomal protein S10 842 40.79 0 884821..886926 + 701 71279669 fusA1 CPS_0875 - elongation factor G 843 30.21 -2 887028..887123 + 31 71278825 - CPS_0876 - hypothetical protein 844 33.62 -1 887258..888289 - 343 71281466 - CPS_0877 - hypothetical protein 845 35.27 0 888744..888950 - 68 71281977 - CPS_0878 - hypothetical protein 846 34.81 0 889352..889486 + 44 71280032 - CPS_0879 - hypothetical protein 847 40.56 0 889476..889724 + 82 71278085 - CPS_0880 - hypothetical protein 848 39.18 0 890002..891369 - 455 71281719 - CPS_0881 - zona occludens toxin-like protein 849 32.35 -1 891459..891863 - 134 71282257 - CPS_0882 - hypothetical protein 850 35.10 0 891860..893221 - 453 71278957 - CPS_0883 - hypothetical protein 851 41.67 +1 893342..893569 - 75 71278203 - CPS_0884 - hypothetical protein 852 38.43 0 893585..893839 - 84 71280335 - CPS_0885 - hypothetical protein 853 38.26 0 893846..894190 - 114 71282101 - CPS_0886 - hypothetical protein 854 40.24 0 894216..895649 - 477 71279225 - CPS_0887 - putative phage replication initiation protein 855 37.75 0 895639..895842 - 67 71280960 - CPS_0888 - hypothetical protein 856 37.45 0 895845..896087 - 80 71281183 - CPS_0889 - putative transcriptional regulator 857 28.32 -2 896199..896597 + 132 71280409 - CPS_0890 - hypothetical protein 858 32.72 -1 896560..896721 - 53 71282165 - CPS_0891 - hypothetical protein 859 29.72 -2 896774..897244 + 156 71281502 - CPS_0892 - hypothetical protein 860 33.33 -1 897186..897296 + 36 71280591 - CPS_0893 - hypothetical protein 861 41.33 0 897465..898352 - 295 71281247 - CPS_0894 - ISCps3, transposase orfB 862 40.50 0 898283..898645 - 120 71281950 - CPS_0895 - ISCps3, transposase orfA 863 31.30 -1 898731..899123 - 130 71281435 - CPS_0896 - hypothetical protein 864 34.00 -1 899224..899676 - 150 71281929 - CPS_0897 - hypothetical protein 865 29.96 -2 899673..900353 - 226 71280695 - CPS_0898 - hypothetical protein 866 37.20 0 900319..900525 - 68 71279748 - CPS_0899 - hypothetical protein 867 33.73 -1 901027..902031 + 334 71281181 - CPS_0900 - phage integrase family site specific recombinase 868 38.45 0 902252..903013 - 253 71280640 - CPS_0901 - hypothetical protein 869 39.69 0 903070..903966 + 298 71279477 - CPS_0902 - acetyltransferase 870 40.96 0 903998..904495 + 165 71280186 - CPS_0903 - hypothetical protein 871 40.22 0 904523..905437 + 304 71282099 - CPS_0904 - hypothetical protein 872 32.26 -1 905508..905786 + 92 71280291 - CPS_0905 - hypothetical protein 873 40.73 0 905786..906718 + 310 71278711 - CPS_0906 - NifR3/Smm1 family protein 874 36.51 0 906787..906912 + 41 71281711 - CPS_0907 - hypothetical protein 875 40.32 0 907180..908724 - 514 71278652 hutH CPS_0908 - histidine ammonia-lyase 876 44.07 +1 908887..910581 - 564 71277962 hutU CPS_0909 - urocanate hydratase 877 36.72 0 910721..911458 - 245 71280178 hutC CPS_0910 - histidine utilization repressor 878 41.69 +1 911672..912928 + 418 71279387 hutI CPS_0911 - imidazolonepropionase 879 36.57 0 913485..914195 + 236 71281657 - CPS_0912 - hypothetical protein 880 37.04 0 914221..916569 + 782 71282335 - CPS_0913 - sensory box protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.