version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 643 39.17 0 677701..679344 - 547 71277795 - CPS_0675 - AMP-binding protein 644 41.03 0 679408..679524 + 38 71278167 - CPS_0676 - hypothetical protein 645 40.23 0 679566..680174 + 202 71280848 - CPS_0677 - acetyltransferase 646 38.14 0 680243..680845 - 200 71282208 - CPS_0678 - hypothetical protein 647 35.73 0 680845..681969 - 374 71280320 - CPS_0679 - hypothetical protein 648 39.25 0 682125..683426 - 433 71278723 - CPS_0680 - sensor histidine kinase 649 39.95 0 683429..684169 - 246 71281676 - CPS_0681 - DNA-binding response regulator 650 37.56 0 684485..684910 - 141 71278207 - CPS_0682 - hypothetical protein 651 37.20 0 684900..685856 - 318 71278802 - CPS_0683 - hypothetical protein 652 40.50 0 685986..688091 - 701 71280846 - CPS_0684 - putative TonB-dependent receptor 653 36.50 0 688425..689435 + 336 71280891 - CPS_0685 - hypothetical protein 654 35.44 0 689448..690731 + 427 71279179 - CPS_0686 - GGDEF/HAMP domain-containing protein 655 37.20 0 690931..691680 + 249 71280315 - CPS_0687 - hypothetical protein 656 39.64 0 692301..694061 + 586 71278747 - CPS_0688 - thiamine pyrophosphate binding domain-containing protein 657 40.00 0 694269..694748 + 159 71278033 - CPS_0689 - hypothetical protein 658 37.22 0 694954..695571 + 205 71278116 - CPS_0690 - hypothetical protein 659 28.65 -2 695576..695746 + 56 71279101 - CPS_0691 - hypothetical protein 660 38.62 0 695813..698008 - 731 71280342 - CPS_0692 - hypothetical protein 661 38.02 0 698442..699806 + 454 71280209 - CPS_0693 - hypothetical protein 662 39.88 0 700137..701282 + 381 71281563 - CPS_0694 - putative lipoprotein 663 41.99 +1 701374..702990 + 538 71278215 - CPS_0695 - putative lipoprotein 664 33.33 -1 703397..703516 + 39 71280154 - CPS_0696 - hypothetical protein 665 39.13 0 703624..704106 + 160 71279285 - CPS_0697 - arginine repressor 666 41.67 +1 704221..705480 - 419 71281339 - CPS_0698 - long-chain fatty acid transport protein 667 41.95 +1 705774..706214 + 146 71282372 - CPS_0699 - hypothetical protein 668 41.22 0 706221..706499 + 92 71281821 - CPS_0700 - hypothetical protein 669 37.76 0 706509..707819 + 436 71277934 - CPS_0701 - hypothetical protein 670 37.31 0 707870..708523 + 217 71278460 - CPS_0702 - fumarylacetoacetate hydrolase family protein 671 40.85 0 708616..709014 + 132 71278995 - CPS_0703 - hypothetical protein 672 39.05 0 709084..709923 - 279 71279675 - CPS_0704 - hypothetical protein 673 31.58 -1 710126..710296 - 56 71281976 - CPS_0705 - hypothetical protein 674 41.69 +1 710302..711582 - 426 71278279 - CPS_0706 - putative ampG protein 675 41.09 0 711599..711727 - 42 71280401 - CPS_0707 - hypothetical protein 676 36.67 0 711700..712029 - 109 71280948 - CPS_0708 - hypothetical protein 677 37.59 0 712267..712854 - 195 71280914 ppiA2 CPS_0709 - peptidyl-prolyl cis-trans isomerase A 678 36.32 0 712904..713473 - 189 71281611 - CPS_0710 - putative lipoprotein 679 37.23 0 713487..714665 - 392 71282296 - CPS_0711 - ribosomal RNA small subunit methyltransferase D 680 40.63 0 714804..715118 + 104 71280098 bolA CPS_0712 - bolA protein 681 38.04 0 715255..716445 + 396 71280300 - CPS_0713 - trans-2-enoyl-CoA reductase 682 33.07 -1 716671..717051 - 126 71280830 - CPS_0714 - hypothetical protein 683 36.56 0 717135..717227 - 30 71281668 - CPS_0715 - hypothetical protein 684 37.48 0 717447..718049 - 200 71282239 - CPS_0716 - hypothetical protein 685 44.44 +1 718725..719669 + 314 71281530 - CPS_0717 - transcription termination factor Rho 686 38.65 0 720124..720330 + 68 71278873 - CPS_0718 - cold shock DNA-binding domain-containing protein 687 43.41 +1 720872..722101 + 409 71279935 - CPS_0719 - putative spore maturation protein A/B 688 37.27 0 722390..723049 - 219 71281079 - CPS_0720 - hemolysin III 689 33.33 -1 723183..723401 - 72 71280921 - CPS_0721 - EF hand domain-containing protein 690 39.99 0 723827..725269 + 480 71281380 - CPS_0722 - alpha/beta fold family hydrolase 691 39.68 0 725332..726087 + 251 71282460 natA CPS_0723 - ATP-binding transport protein NatA 692 39.04 0 726084..727274 + 396 71279262 natB CPS_0724 - protein NatB 693 40.70 0 727671..728213 + 180 71281281 - CPS_0725 - sigma-70 family RNA polymerase sigma factor 694 37.39 0 728210..728875 + 221 71279558 - CPS_0726 - hypothetical protein 695 37.40 0 729194..729439 - 81 71279858 - CPS_0727 - hypothetical protein 696 41.19 0 729351..730610 + 419 71278068 glyA1 CPS_0728 - serine hydroxymethyltransferase 697 38.96 0 730921..731418 + 165 71281647 - CPS_0729 - transcriptional regulator NrdR 698 41.03 0 731492..732661 + 389 71282342 ribD CPS_0730 - riboflavin biosynthesis protein RibD 699 40.20 0 732709..733407 + 232 71280235 ribE1 CPS_0731 - riboflavin synthase subunit alpha 700 39.82 0 733549..734658 + 369 71280915 ribB CPS_0732 - 3,4-dihydroxy-2-butanone-4-phosphate synthase 701 38.44 0 734820..735995 + 391 71280551 - CPS_0733 - hypothetical protein 702 37.43 0 736051..736758 + 235 71279893 - CPS_0734 - hypothetical protein 703 35.28 0 736745..737515 + 256 71280157 - CPS_0735 - hypothetical protein 704 36.04 0 737483..737593 - 36 71278223 - CPS_0736 - hypothetical protein 705 39.52 0 737654..737863 - 69 71278479 - CPS_0737 - cold shock DNA-binding domain-containing protein 706 39.73 0 738338..741259 - 973 71281480 valS CPS_0738 - valyl-tRNA synthetase 707 40.72 0 741391..741864 - 157 71280374 holC CPS_0739 - DNA polymerase III, chi subunit 708 41.57 +1 741959..743464 - 501 71279435 pepA CPS_0740 - leucyl aminopeptidase 709 38.56 0 743693..744859 + 388 71279918 - CPS_0741 - putative permease 710 36.30 0 744859..744993 + 44 71279374 - CPS_0742 - hypothetical protein 711 39.70 0 744993..746060 + 355 71277954 - CPS_0743 - putative permease 712 37.92 0 746189..746689 - 166 71279643 - CPS_0744 - hypothetical protein 713 38.10 0 746998..750081 - 1027 71281409 - CPS_0745 - AcrB/AcrD/AcrF family protein 714 39.60 0 750096..751196 - 366 71280721 - CPS_0746 - AcrA/E family efflux transporter MFP subunit 715 38.00 0 751338..751958 + 206 71280732 - CPS_0747 - TetR family transcriptional regulator 716 37.99 0 752366..752644 + 92 71282523 ppiC1 CPS_0749 - peptidyl-prolyl cis-trans isomerase C 717 36.05 0 753084..753377 + 97 71281822 - CPS_0750 - hypothetical protein 718 41.94 +1 753796..756165 - 789 71278628 - CPS_0751 - cold-active alkaline serine protease 719 32.13 -1 756376..756624 + 82 71278632 - CPS_0752 - hypothetical protein 720 41.97 +1 756621..758450 + 609 71280567 - CPS_0753 - alkaline serine protease 721 40.14 0 758752..760455 + 567 71279357 - CPS_0754 - alkaline serine protease 722 35.48 0 760546..763707 + 1053 71278198 - CPS_0755 - GGDEF domain-containing protein 723 37.42 0 763721..766702 - 993 71278484 - CPS_0756 - sensory box sensor histidine kinase/DNA-binding response regulator 724 34.46 -1 767101..767277 - 58 71281786 - CPS_0757 - hypothetical protein 725 40.22 0 767326..768399 - 357 71282508 - CPS_0758 - hypothetical protein 726 43.79 +1 768667..769020 - 117 71281287 - CPS_0759 - methylmalonate-semialdehyde dehydrogenase, interruption 727 44.61 +1 769215..769808 + 197 71278284 - CPS_0760 - hypothetical protein 728 41.21 0 770682..775289 + 1535 71281776 - CPS_0761 - putative glutamate synthase, ferredoxin-dependent 729 43.73 +1 775310..776800 + 496 71280317 gltD CPS_0762 - glutamate synthase subunit beta 730 36.61 0 777129..779114 + 661 71280933 - CPS_0763 - methyl-accepting chemotaxis protein 731 36.99 0 779733..781535 + 600 71279455 - CPS_0764 - hypothetical protein 732 34.88 0 781568..783835 + 755 71280192 - CPS_0765 - hypothetical protein 733 38.49 0 783835..784707 + 290 71278055 - CPS_0766 - hypothetical protein 734 33.23 -1 785114..786040 + 308 71278793 - CPS_0767 - auxin efflux carrier family protein 735 44.44 +1 786206..787240 + 344 71279082 selD CPS_0768 - selenide, water dikinase 736 41.11 0 787237..788355 + 372 71281259 - CPS_0769 - tRNA 2-selenouridine synthase 737 38.10 0 788473..789375 - 300 71277790 - CPS_0770 - LysR family transcriptional regulator 738 38.59 0 789454..790404 + 316 71281996 - CPS_0771 - isochorismatase family protein 739 32.20 -1 790503..790679 + 58 71280769 - CPS_0772 - hypothetical protein 740 36.21 0 790579..791169 + 196 71279190 - CPS_0773 - hypothetical protein 741 38.98 0 791518..792774 + 418 71278458 - CPS_0774 - RND family efflux transporter MFP subunit 742 38.80 0 792878..793609 + 243 71279130 - CPS_0775 - ABC transporter, ATP-binding protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0