version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 576 41.33 0 613761..613985 - 74 71278970 - CPS_0608 - hypothetical protein 577 35.53 0 614083..614994 + 303 71281439 rbn CPS_0609 - ribonuclease BN 578 39.50 0 614991..615428 + 145 71282133 dtd CPS_0610 - D-tyrosyl-tRNA deacylase 579 43.09 +1 615689..616057 + 122 71281768 rplN CPS_0611 - ribosomal protein L14 580 37.46 0 616070..616384 + 104 71282363 rplX CPS_0612 - ribosomal protein L24 581 41.03 0 616397..616942 + 181 71280744 rplE CPS_0613 - 50S ribosomal protein L5 582 41.50 0 616947..617252 + 101 71281347 rpsN CPS_0614 - 30S ribosomal protein S14 583 40.00 0 617272..617661 + 129 71281939 rpsH CPS_0615 - ribosomal protein S8 584 40.07 0 617672..618205 + 177 71282308 rplF CPS_0616 - ribosomal protein L6 585 44.63 +1 618215..618568 + 117 71280095 rplR CPS_0617 - ribosomal protein L18 586 44.31 +1 618578..619087 + 169 71278175 rpsE CPS_0618 - ribosomal protein S5 587 36.56 0 619088..619273 + 61 71279415 rpmD CPS_0619 - ribosomal protein L30 588 41.38 0 619276..619710 + 144 71279982 rplO CPS_0620 - ribosomal protein L15 589 42.53 +1 619717..621054 + 445 71280980 secY CPS_0621 - preprotein translocase, SecY subunit 590 36.84 0 621085..621198 + 37 71280904 rpmJ CPS_0622 - ribosomal protein L36 591 44.82 +1 621350..621706 + 118 71278025 rpsM CPS_0623 - 30S ribosomal protein S13 592 46.67 +2 621720..622109 + 129 71278557 rpsK CPS_0624 - 30S ribosomal protein S11 593 40.58 0 622142..622762 + 206 71277977 rpsD CPS_0625 - ribosomal protein S4 594 42.53 +1 622788..623777 + 329 71279611 rpoA CPS_0626 - DNA-directed RNA polymerase subunit alpha 595 43.21 +1 623821..624225 + 134 71278989 rplQ CPS_0627 - 50S ribosomal protein L17 596 40.11 0 624421..625320 + 299 71281158 prkB CPS_0628 - phosphoribulokinase 597 35.30 0 625655..627535 - 626 71280694 - CPS_0629 - GGDEF domain-containing protein 598 35.97 0 627757..628515 - 252 71281634 speD CPS_0630 - S-adenosylmethionine decarboxylase 599 43.70 +1 628528..628932 - 134 71281754 - CPS_0631 - OsmC family protein 600 36.23 0 629147..629491 - 114 71281157 - CPS_0632 - hypothetical protein 601 38.87 0 629665..630855 - 396 71281846 astE CPS_0633 - succinylglutamate desuccinylase 602 41.18 0 630856..632334 - 492 71282088 astD CPS_0634 - succinylglutamic semialdehyde dehydrogenase 603 38.25 0 632460..633476 - 338 71278021 astA CPS_0635 - arginine N-succinyltransferase 604 39.27 0 633570..634781 - 403 71278920 argD CPS_0636 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 605 36.50 0 635450..636490 - 346 71279470 - CPS_0637 - hypothetical protein 606 36.17 0 636703..637302 - 199 71278635 pabA CPS_0638 - anthranilate synthase component II 607 38.40 0 637472..638674 - 400 71279917 - CPS_0639 - hypothetical protein 608 39.91 0 639049..639276 + 75 71279696 - CPS_0640 - putative glutaredoxin 609 38.64 0 639577..639915 + 112 71280408 - CPS_0641 - nitrogen regulatory protein P-II 610 40.83 0 639928..641208 + 426 71280768 - CPS_0642 - putative ammonium transporter 611 38.37 0 641366..642238 - 290 71281270 ppiA1 CPS_0643 - peptidyl-prolyl cis-trans isomerase A 612 42.17 +1 642533..642928 + 131 71282232 - CPS_0644 - hypothetical protein 613 38.83 0 643090..643944 + 284 71277947 - CPS_0645 - hypothetical protein 614 36.11 0 644004..644111 + 35 71278589 - CPS_0646 - hypothetical protein 615 40.99 0 644205..644426 + 73 71278986 feoA CPS_0647 - ferrous iron transport protein A 616 39.29 0 644477..646660 + 727 71277903 feoB CPS_0648 - ferrous iron transport protein B 617 40.80 0 647258..648301 + 347 71278146 pfkA CPS_0649 - 6-phosphofructokinase 618 38.10 0 648387..649877 - 496 71280445 - CPS_0650 - sensor histidine kinase 619 36.91 0 649884..650666 - 260 71282358 - CPS_0651 - DNA-binding response regulator 620 42.21 +1 650711..651442 - 243 71278704 - CPS_0652 - hypothetical protein 621 42.64 +1 651452..652171 - 239 71279151 - CPS_0653 - hypothetical protein 622 36.74 0 652520..653371 - 283 71280544 - CPS_0654 - putative lipoprotein 623 36.28 0 653522..654607 - 361 71282025 - CPS_0655 - hypothetical protein 624 40.02 0 654948..656054 - 368 71282206 - CPS_0656 - enoyl-CoA hydratase/isomerase family protein 625 39.64 0 656054..656830 - 258 71277850 - CPS_0657 - enoyl-CoA hydratase 626 42.50 +1 656886..658052 - 388 71279027 - CPS_0658 - acyl-CoA dehydrogenase 627 40.32 0 658291..659163 + 290 71278818 - CPS_0659 - AraC family transcriptional regulator 628 40.75 0 659322..660899 - 525 71279364 - CPS_0660 - sulfatase family protein 629 42.61 +1 660899..662461 - 520 71278812 - CPS_0661 - AMP-binding enzyme family protein 630 38.82 0 662686..663705 - 339 71278276 - CPS_0662 - AraC family transcriptional regulator 631 41.50 0 663968..664408 + 146 71281524 - CPS_0663 - hypothetical protein 632 42.75 +1 664446..664859 + 137 71280973 - CPS_0664 - MaoC domain-containing protein 633 42.15 +1 664915..665742 + 275 71280473 - CPS_0665 - putative 3-oxoacyl-(acyl-carrier-protein) reductase 634 42.03 +1 665753..666913 + 386 71279398 - CPS_0666 - acyl-CoA dehydrogenase 635 40.34 0 667020..669401 + 793 71279021 - CPS_0667 - putative TonB-dependent receptor 636 41.99 +1 669469..670635 + 388 71279469 - CPS_0668 - CAIB/BAIF family protein 637 45.73 +2 670653..671822 + 389 71278797 - CPS_0669 - lipid-transfer protein 638 40.81 0 672068..673672 + 534 71282351 - CPS_0670 - GMC family oxidoreductase 639 38.32 0 673669..674169 + 166 71281633 - CPS_0671 - hypothetical protein 640 28.28 -2 674232..674330 + 32 71279859 - CPS_0672 - hypothetical protein 641 38.02 0 674360..675085 + 241 71279155 - CPS_0673 - enoyl-CoA hydratase/isomerase family protein 642 39.92 0 675188..677554 - 788 71278443 - CPS_0674 - sensory box protein 643 39.17 0 677701..679344 - 547 71277795 - CPS_0675 - AMP-binding protein 644 41.03 0 679408..679524 + 38 71278167 - CPS_0676 - hypothetical protein 645 40.23 0 679566..680174 + 202 71280848 - CPS_0677 - acetyltransferase 646 38.14 0 680243..680845 - 200 71282208 - CPS_0678 - hypothetical protein 647 35.73 0 680845..681969 - 374 71280320 - CPS_0679 - hypothetical protein 648 39.25 0 682125..683426 - 433 71278723 - CPS_0680 - sensor histidine kinase 649 39.95 0 683429..684169 - 246 71281676 - CPS_0681 - DNA-binding response regulator 650 37.56 0 684485..684910 - 141 71278207 - CPS_0682 - hypothetical protein 651 37.20 0 684900..685856 - 318 71278802 - CPS_0683 - hypothetical protein 652 40.50 0 685986..688091 - 701 71280846 - CPS_0684 - putative TonB-dependent receptor 653 36.50 0 688425..689435 + 336 71280891 - CPS_0685 - hypothetical protein 654 35.44 0 689448..690731 + 427 71279179 - CPS_0686 - GGDEF/HAMP domain-containing protein 655 37.20 0 690931..691680 + 249 71280315 - CPS_0687 - hypothetical protein 656 39.64 0 692301..694061 + 586 71278747 - CPS_0688 - thiamine pyrophosphate binding domain-containing protein 657 40.00 0 694269..694748 + 159 71278033 - CPS_0689 - hypothetical protein 658 37.22 0 694954..695571 + 205 71278116 - CPS_0690 - hypothetical protein 659 28.65 -2 695576..695746 + 56 71279101 - CPS_0691 - hypothetical protein 660 38.62 0 695813..698008 - 731 71280342 - CPS_0692 - hypothetical protein 661 38.02 0 698442..699806 + 454 71280209 - CPS_0693 - hypothetical protein 662 39.88 0 700137..701282 + 381 71281563 - CPS_0694 - putative lipoprotein 663 41.99 +1 701374..702990 + 538 71278215 - CPS_0695 - putative lipoprotein 664 33.33 -1 703397..703516 + 39 71280154 - CPS_0696 - hypothetical protein 665 39.13 0 703624..704106 + 160 71279285 - CPS_0697 - arginine repressor 666 41.67 +1 704221..705480 - 419 71281339 - CPS_0698 - long-chain fatty acid transport protein 667 41.95 +1 705774..706214 + 146 71282372 - CPS_0699 - hypothetical protein 668 41.22 0 706221..706499 + 92 71281821 - CPS_0700 - hypothetical protein 669 37.76 0 706509..707819 + 436 71277934 - CPS_0701 - hypothetical protein 670 37.31 0 707870..708523 + 217 71278460 - CPS_0702 - fumarylacetoacetate hydrolase family protein 671 40.85 0 708616..709014 + 132 71278995 - CPS_0703 - hypothetical protein 672 39.05 0 709084..709923 - 279 71279675 - CPS_0704 - hypothetical protein 673 31.58 -1 710126..710296 - 56 71281976 - CPS_0705 - hypothetical protein 674 41.69 +1 710302..711582 - 426 71278279 - CPS_0706 - putative ampG protein 675 41.09 0 711599..711727 - 42 71280401 - CPS_0707 - hypothetical protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0