version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 547 39.78 0 580511..580975 + 154 71279552 - CPS_0579 - phosphotyrosine protein phosphatase 548 37.59 0 581041..583320 + 759 71281329 - CPS_0580 - tyrosine-protein kinase 549 32.54 -1 583458..583583 + 41 71277839 - CPS_0581 - hypothetical protein 550 29.40 -2 583573..584793 + 406 71279625 - CPS_0582 - polysaccharide biosynthesis protein 551 36.52 0 584777..586312 + 511 71278583 - CPS_0583 - hypothetical protein 552 36.94 0 586577..586687 + 36 71277900 - CPS_0584 - hypothetical protein 553 30.12 -2 586684..587835 + 383 71280593 - CPS_0585 - hypothetical protein 554 30.88 -2 588046..589188 + 380 71282361 - CPS_0586 - glycosyl transferase, group 1 family protein 555 30.79 -2 589530..590984 + 484 71279958 - CPS_0587 - hypothetical protein 556 36.86 0 590986..592119 + 377 71282194 - CPS_0588 - glycosyl transferase, group 1 family protein 557 36.23 0 592116..593081 + 321 71281833 - CPS_0589 - sugar epimerase family protein 558 34.92 0 593142..593708 + 188 71281303 - CPS_0590 - putative polysaccharide biosynthesis glycosyltransferase 559 36.85 0 593724..594890 + 388 71280758 ugd CPS_0591 - UDP-glucose 6-dehydrogenase 560 38.11 0 595062..596066 + 334 71279518 - CPS_0592 - capsular polysaccharide biosynthesis protein 561 38.29 0 596131..597018 + 295 71278999 galU1 CPS_0593 - UTP-glucose-1-phosphate uridylyltransferase 562 39.88 0 597300..599240 + 646 71278441 - CPS_0594 - polysaccharide biosynthesis protein 563 38.10 0 599413..599895 - 160 71280267 - CPS_0595 - hypothetical protein 564 37.31 0 599965..600567 - 200 71281203 - CPS_0596 - putative lipoprotein 565 39.66 0 600735..601208 - 157 71279784 - CPS_0597 - putative lipoprotein 566 39.53 0 601284..602735 - 483 71280512 - CPS_0598 - putative lipoprotein 567 36.01 0 602899..603234 + 111 71278860 - CPS_0599 - plastocyanin/azurin family copper binding protein 568 39.37 0 603497..603943 + 148 71279106 norC CPS_0600 - nitric-oxide reductase, C subunit 569 37.64 0 603947..605338 + 463 71282466 norB CPS_0601 - nitric-oxide reductase, B subunit 570 46.85 +2 605424..605534 - 36 71278081 - CPS_0602 - hypothetical protein 571 40.15 0 605760..607271 + 503 71281621 - CPS_0603 - serine carboxypeptidase 572 36.46 0 607691..608842 + 383 71281826 - CPS_0604 - hypothetical protein 573 37.30 0 608853..611096 + 747 71280301 - CPS_0605 - hypothetical protein 574 38.61 0 611378..613195 + 605 71281137 typA CPS_0606 - GTP-binding protein TypA 575 39.89 0 613524..613706 + 60 71279332 - CPS_0607 - hypothetical protein 576 41.33 0 613761..613985 - 74 71278970 - CPS_0608 - hypothetical protein 577 35.53 0 614083..614994 + 303 71281439 rbn CPS_0609 - ribonuclease BN 578 39.50 0 614991..615428 + 145 71282133 dtd CPS_0610 - D-tyrosyl-tRNA deacylase 579 43.09 +1 615689..616057 + 122 71281768 rplN CPS_0611 - ribosomal protein L14 580 37.46 0 616070..616384 + 104 71282363 rplX CPS_0612 - ribosomal protein L24 581 41.03 0 616397..616942 + 181 71280744 rplE CPS_0613 - 50S ribosomal protein L5 582 41.50 0 616947..617252 + 101 71281347 rpsN CPS_0614 - 30S ribosomal protein S14 583 40.00 0 617272..617661 + 129 71281939 rpsH CPS_0615 - ribosomal protein S8 584 40.07 0 617672..618205 + 177 71282308 rplF CPS_0616 - ribosomal protein L6 585 44.63 +1 618215..618568 + 117 71280095 rplR CPS_0617 - ribosomal protein L18 586 44.31 +1 618578..619087 + 169 71278175 rpsE CPS_0618 - ribosomal protein S5 587 36.56 0 619088..619273 + 61 71279415 rpmD CPS_0619 - ribosomal protein L30 588 41.38 0 619276..619710 + 144 71279982 rplO CPS_0620 - ribosomal protein L15 589 42.53 +1 619717..621054 + 445 71280980 secY CPS_0621 - preprotein translocase, SecY subunit 590 36.84 0 621085..621198 + 37 71280904 rpmJ CPS_0622 - ribosomal protein L36 591 44.82 +1 621350..621706 + 118 71278025 rpsM CPS_0623 - 30S ribosomal protein S13 592 46.67 +2 621720..622109 + 129 71278557 rpsK CPS_0624 - 30S ribosomal protein S11 593 40.58 0 622142..622762 + 206 71277977 rpsD CPS_0625 - ribosomal protein S4 594 42.53 +1 622788..623777 + 329 71279611 rpoA CPS_0626 - DNA-directed RNA polymerase subunit alpha 595 43.21 +1 623821..624225 + 134 71278989 rplQ CPS_0627 - 50S ribosomal protein L17 596 40.11 0 624421..625320 + 299 71281158 prkB CPS_0628 - phosphoribulokinase 597 35.30 0 625655..627535 - 626 71280694 - CPS_0629 - GGDEF domain-containing protein 598 35.97 0 627757..628515 - 252 71281634 speD CPS_0630 - S-adenosylmethionine decarboxylase 599 43.70 +1 628528..628932 - 134 71281754 - CPS_0631 - OsmC family protein 600 36.23 0 629147..629491 - 114 71281157 - CPS_0632 - hypothetical protein 601 38.87 0 629665..630855 - 396 71281846 astE CPS_0633 - succinylglutamate desuccinylase 602 41.18 0 630856..632334 - 492 71282088 astD CPS_0634 - succinylglutamic semialdehyde dehydrogenase 603 38.25 0 632460..633476 - 338 71278021 astA CPS_0635 - arginine N-succinyltransferase 604 39.27 0 633570..634781 - 403 71278920 argD CPS_0636 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 605 36.50 0 635450..636490 - 346 71279470 - CPS_0637 - hypothetical protein 606 36.17 0 636703..637302 - 199 71278635 pabA CPS_0638 - anthranilate synthase component II 607 38.40 0 637472..638674 - 400 71279917 - CPS_0639 - hypothetical protein 608 39.91 0 639049..639276 + 75 71279696 - CPS_0640 - putative glutaredoxin 609 38.64 0 639577..639915 + 112 71280408 - CPS_0641 - nitrogen regulatory protein P-II 610 40.83 0 639928..641208 + 426 71280768 - CPS_0642 - putative ammonium transporter 611 38.37 0 641366..642238 - 290 71281270 ppiA1 CPS_0643 - peptidyl-prolyl cis-trans isomerase A 612 42.17 +1 642533..642928 + 131 71282232 - CPS_0644 - hypothetical protein 613 38.83 0 643090..643944 + 284 71277947 - CPS_0645 - hypothetical protein 614 36.11 0 644004..644111 + 35 71278589 - CPS_0646 - hypothetical protein 615 40.99 0 644205..644426 + 73 71278986 feoA CPS_0647 - ferrous iron transport protein A 616 39.29 0 644477..646660 + 727 71277903 feoB CPS_0648 - ferrous iron transport protein B 617 40.80 0 647258..648301 + 347 71278146 pfkA CPS_0649 - 6-phosphofructokinase 618 38.10 0 648387..649877 - 496 71280445 - CPS_0650 - sensor histidine kinase 619 36.91 0 649884..650666 - 260 71282358 - CPS_0651 - DNA-binding response regulator 620 42.21 +1 650711..651442 - 243 71278704 - CPS_0652 - hypothetical protein 621 42.64 +1 651452..652171 - 239 71279151 - CPS_0653 - hypothetical protein 622 36.74 0 652520..653371 - 283 71280544 - CPS_0654 - putative lipoprotein 623 36.28 0 653522..654607 - 361 71282025 - CPS_0655 - hypothetical protein 624 40.02 0 654948..656054 - 368 71282206 - CPS_0656 - enoyl-CoA hydratase/isomerase family protein 625 39.64 0 656054..656830 - 258 71277850 - CPS_0657 - enoyl-CoA hydratase 626 42.50 +1 656886..658052 - 388 71279027 - CPS_0658 - acyl-CoA dehydrogenase 627 40.32 0 658291..659163 + 290 71278818 - CPS_0659 - AraC family transcriptional regulator 628 40.75 0 659322..660899 - 525 71279364 - CPS_0660 - sulfatase family protein 629 42.61 +1 660899..662461 - 520 71278812 - CPS_0661 - AMP-binding enzyme family protein 630 38.82 0 662686..663705 - 339 71278276 - CPS_0662 - AraC family transcriptional regulator 631 41.50 0 663968..664408 + 146 71281524 - CPS_0663 - hypothetical protein 632 42.75 +1 664446..664859 + 137 71280973 - CPS_0664 - MaoC domain-containing protein 633 42.15 +1 664915..665742 + 275 71280473 - CPS_0665 - putative 3-oxoacyl-(acyl-carrier-protein) reductase 634 42.03 +1 665753..666913 + 386 71279398 - CPS_0666 - acyl-CoA dehydrogenase 635 40.34 0 667020..669401 + 793 71279021 - CPS_0667 - putative TonB-dependent receptor 636 41.99 +1 669469..670635 + 388 71279469 - CPS_0668 - CAIB/BAIF family protein 637 45.73 +2 670653..671822 + 389 71278797 - CPS_0669 - lipid-transfer protein 638 40.81 0 672068..673672 + 534 71282351 - CPS_0670 - GMC family oxidoreductase 639 38.32 0 673669..674169 + 166 71281633 - CPS_0671 - hypothetical protein 640 28.28 -2 674232..674330 + 32 71279859 - CPS_0672 - hypothetical protein 641 38.02 0 674360..675085 + 241 71279155 - CPS_0673 - enoyl-CoA hydratase/isomerase family protein 642 39.92 0 675188..677554 - 788 71278443 - CPS_0674 - sensory box protein 643 39.17 0 677701..679344 - 547 71277795 - CPS_0675 - AMP-binding protein 644 41.03 0 679408..679524 + 38 71278167 - CPS_0676 - hypothetical protein 645 40.23 0 679566..680174 + 202 71280848 - CPS_0677 - acetyltransferase 646 38.14 0 680243..680845 - 200 71282208 - CPS_0678 - hypothetical protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.