version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 519 40.75 0 541451..542272 - 273 71279805 - CPS_0543 - putative methylase 520 38.61 0 542440..543045 - 201 71281772 - CPS_0544 - hypothetical protein 521 35.48 0 543040..543132 + 30 71280019 - CPS_0545 - hypothetical protein 522 35.37 0 543186..544955 - 589 71280714 - CPS_0546 - GGDEF domain-containing protein 523 31.84 -1 544966..545232 - 88 71279645 - CPS_0547 - hypothetical protein 524 34.22 -1 545636..546196 - 186 71277959 - CPS_0548 - acetyltransferase 525 38.84 0 546351..547676 - 441 71278600 - CPS_0549 - hypothetical protein 526 42.28 +1 547968..548984 + 338 71281750 - CPS_0550 - NifR3/Smm1 family protein 527 38.54 0 549047..549334 + 95 71282098 fis CPS_0551 - DNA-binding protein Fis 528 40.20 0 549482..551083 + 533 71282549 purH CPS_0552 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 529 23.96 -2 551225..551320 + 31 71279503 - CPS_0553 - hypothetical protein 530 40.40 0 551595..552443 + 282 71277860 - CPS_0554 - hypothetical protein 531 42.59 +1 552484..553779 + 431 71279844 purD CPS_0555 - phosphoribosylamine--glycine ligase 532 37.25 0 556447..556650 + 67 71282018 - CPS_0558 - hypothetical protein 533 37.04 0 559657..559818 - 53 71280307 - CPS_0560 - hypothetical protein 534 37.25 0 562288..562491 + 67 71278120 - CPS_0564 - hypothetical protein 535 35.24 0 565515..565619 - 34 71278718 - CPS_0566 - hypothetical protein 536 45.16 +2 566052..566144 + 30 71280337 - CPS_0568 - hypothetical protein 537 39.33 0 566530..568614 - 694 71282302 - CPS_0569 - hypothetical protein 538 40.51 0 568730..569746 - 338 71281019 - CPS_0570 - putative lipoprotein 539 38.44 0 570057..570878 + 273 71278238 - CPS_0571 - enoyl-CoA hydratase 540 38.44 0 571278..572549 + 423 71279598 - CPS_0572 - RND family efflux transporter MFP subunit 541 41.73 +1 572646..573407 + 253 71281764 - CPS_0573 - ABC transporter, ATP-binding protein 542 39.18 0 573400..574698 + 432 71278837 - CPS_0574 - putative ABC transporter, permease protein 543 36.95 0 574720..575934 + 404 71282218 - CPS_0575 - putative ABC transporter, permease protein 544 40.52 0 576233..577540 + 435 71280249 - CPS_0576 - sigma-54 dependent DNA-binding response regulator 545 36.48 0 577551..578852 + 433 71280198 - CPS_0577 - sensor histidine kinase 546 38.74 0 579384..580511 + 375 71280804 - CPS_0578 - polysaccharide biosynthesis/export protein 547 39.78 0 580511..580975 + 154 71279552 - CPS_0579 - phosphotyrosine protein phosphatase 548 37.59 0 581041..583320 + 759 71281329 - CPS_0580 - tyrosine-protein kinase 549 32.54 -1 583458..583583 + 41 71277839 - CPS_0581 - hypothetical protein 550 29.40 -2 583573..584793 + 406 71279625 - CPS_0582 - polysaccharide biosynthesis protein 551 36.52 0 584777..586312 + 511 71278583 - CPS_0583 - hypothetical protein 552 36.94 0 586577..586687 + 36 71277900 - CPS_0584 - hypothetical protein 553 30.12 -2 586684..587835 + 383 71280593 - CPS_0585 - hypothetical protein 554 30.88 -2 588046..589188 + 380 71282361 - CPS_0586 - glycosyl transferase, group 1 family protein 555 30.79 -2 589530..590984 + 484 71279958 - CPS_0587 - hypothetical protein 556 36.86 0 590986..592119 + 377 71282194 - CPS_0588 - glycosyl transferase, group 1 family protein 557 36.23 0 592116..593081 + 321 71281833 - CPS_0589 - sugar epimerase family protein 558 34.92 0 593142..593708 + 188 71281303 - CPS_0590 - putative polysaccharide biosynthesis glycosyltransferase 559 36.85 0 593724..594890 + 388 71280758 ugd CPS_0591 - UDP-glucose 6-dehydrogenase 560 38.11 0 595062..596066 + 334 71279518 - CPS_0592 - capsular polysaccharide biosynthesis protein 561 38.29 0 596131..597018 + 295 71278999 galU1 CPS_0593 - UTP-glucose-1-phosphate uridylyltransferase 562 39.88 0 597300..599240 + 646 71278441 - CPS_0594 - polysaccharide biosynthesis protein 563 38.10 0 599413..599895 - 160 71280267 - CPS_0595 - hypothetical protein 564 37.31 0 599965..600567 - 200 71281203 - CPS_0596 - putative lipoprotein 565 39.66 0 600735..601208 - 157 71279784 - CPS_0597 - putative lipoprotein 566 39.53 0 601284..602735 - 483 71280512 - CPS_0598 - putative lipoprotein 567 36.01 0 602899..603234 + 111 71278860 - CPS_0599 - plastocyanin/azurin family copper binding protein 568 39.37 0 603497..603943 + 148 71279106 norC CPS_0600 - nitric-oxide reductase, C subunit 569 37.64 0 603947..605338 + 463 71282466 norB CPS_0601 - nitric-oxide reductase, B subunit 570 46.85 +2 605424..605534 - 36 71278081 - CPS_0602 - hypothetical protein 571 40.15 0 605760..607271 + 503 71281621 - CPS_0603 - serine carboxypeptidase 572 36.46 0 607691..608842 + 383 71281826 - CPS_0604 - hypothetical protein 573 37.30 0 608853..611096 + 747 71280301 - CPS_0605 - hypothetical protein 574 38.61 0 611378..613195 + 605 71281137 typA CPS_0606 - GTP-binding protein TypA 575 39.89 0 613524..613706 + 60 71279332 - CPS_0607 - hypothetical protein 576 41.33 0 613761..613985 - 74 71278970 - CPS_0608 - hypothetical protein 577 35.53 0 614083..614994 + 303 71281439 rbn CPS_0609 - ribonuclease BN 578 39.50 0 614991..615428 + 145 71282133 dtd CPS_0610 - D-tyrosyl-tRNA deacylase 579 43.09 +1 615689..616057 + 122 71281768 rplN CPS_0611 - ribosomal protein L14 580 37.46 0 616070..616384 + 104 71282363 rplX CPS_0612 - ribosomal protein L24 581 41.03 0 616397..616942 + 181 71280744 rplE CPS_0613 - 50S ribosomal protein L5 582 41.50 0 616947..617252 + 101 71281347 rpsN CPS_0614 - 30S ribosomal protein S14 583 40.00 0 617272..617661 + 129 71281939 rpsH CPS_0615 - ribosomal protein S8 584 40.07 0 617672..618205 + 177 71282308 rplF CPS_0616 - ribosomal protein L6 585 44.63 +1 618215..618568 + 117 71280095 rplR CPS_0617 - ribosomal protein L18 586 44.31 +1 618578..619087 + 169 71278175 rpsE CPS_0618 - ribosomal protein S5 587 36.56 0 619088..619273 + 61 71279415 rpmD CPS_0619 - ribosomal protein L30 588 41.38 0 619276..619710 + 144 71279982 rplO CPS_0620 - ribosomal protein L15 589 42.53 +1 619717..621054 + 445 71280980 secY CPS_0621 - preprotein translocase, SecY subunit 590 36.84 0 621085..621198 + 37 71280904 rpmJ CPS_0622 - ribosomal protein L36 591 44.82 +1 621350..621706 + 118 71278025 rpsM CPS_0623 - 30S ribosomal protein S13 592 46.67 +2 621720..622109 + 129 71278557 rpsK CPS_0624 - 30S ribosomal protein S11 593 40.58 0 622142..622762 + 206 71277977 rpsD CPS_0625 - ribosomal protein S4 594 42.53 +1 622788..623777 + 329 71279611 rpoA CPS_0626 - DNA-directed RNA polymerase subunit alpha 595 43.21 +1 623821..624225 + 134 71278989 rplQ CPS_0627 - 50S ribosomal protein L17 596 40.11 0 624421..625320 + 299 71281158 prkB CPS_0628 - phosphoribulokinase 597 35.30 0 625655..627535 - 626 71280694 - CPS_0629 - GGDEF domain-containing protein 598 35.97 0 627757..628515 - 252 71281634 speD CPS_0630 - S-adenosylmethionine decarboxylase 599 43.70 +1 628528..628932 - 134 71281754 - CPS_0631 - OsmC family protein 600 36.23 0 629147..629491 - 114 71281157 - CPS_0632 - hypothetical protein 601 38.87 0 629665..630855 - 396 71281846 astE CPS_0633 - succinylglutamate desuccinylase 602 41.18 0 630856..632334 - 492 71282088 astD CPS_0634 - succinylglutamic semialdehyde dehydrogenase 603 38.25 0 632460..633476 - 338 71278021 astA CPS_0635 - arginine N-succinyltransferase 604 39.27 0 633570..634781 - 403 71278920 argD CPS_0636 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 605 36.50 0 635450..636490 - 346 71279470 - CPS_0637 - hypothetical protein 606 36.17 0 636703..637302 - 199 71278635 pabA CPS_0638 - anthranilate synthase component II 607 38.40 0 637472..638674 - 400 71279917 - CPS_0639 - hypothetical protein 608 39.91 0 639049..639276 + 75 71279696 - CPS_0640 - putative glutaredoxin 609 38.64 0 639577..639915 + 112 71280408 - CPS_0641 - nitrogen regulatory protein P-II 610 40.83 0 639928..641208 + 426 71280768 - CPS_0642 - putative ammonium transporter 611 38.37 0 641366..642238 - 290 71281270 ppiA1 CPS_0643 - peptidyl-prolyl cis-trans isomerase A 612 42.17 +1 642533..642928 + 131 71282232 - CPS_0644 - hypothetical protein 613 38.83 0 643090..643944 + 284 71277947 - CPS_0645 - hypothetical protein 614 36.11 0 644004..644111 + 35 71278589 - CPS_0646 - hypothetical protein 615 40.99 0 644205..644426 + 73 71278986 feoA CPS_0647 - ferrous iron transport protein A 616 39.29 0 644477..646660 + 727 71277903 feoB CPS_0648 - ferrous iron transport protein B 617 40.80 0 647258..648301 + 347 71278146 pfkA CPS_0649 - 6-phosphofructokinase 618 38.10 0 648387..649877 - 496 71280445 - CPS_0650 - sensor histidine kinase 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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