version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 486 35.00 0 512255..512374 - 39 71278886 - CPS_0510 - hypothetical protein 487 35.07 0 512644..513333 - 229 71279668 - CPS_0511 - hypothetical protein 488 37.16 0 513572..514093 - 173 71282130 - CPS_0512 - putative lipoprotein 489 37.13 0 514677..515177 + 166 71277770 - CPS_0513 - hypothetical protein 490 33.80 -1 515198..515413 + 71 71280987 - CPS_0514 - hypothetical protein 491 35.06 0 515361..515534 - 57 71281827 - CPS_0515 - hypothetical protein 492 37.01 0 515464..516198 - 244 71279362 - CPS_0516 - short chain dehydrogenase/reductase family oxidoreductase 493 36.50 0 516188..516598 - 136 71281373 - CPS_0517 - hypothetical protein 494 35.51 0 516631..517089 - 152 71280597 - CPS_0518 - hypothetical protein 495 38.51 0 517420..517593 + 57 71281118 - CPS_0519 - hypothetical protein 496 38.31 0 517662..518525 - 287 71282030 - CPS_0520 - hypothetical protein 497 38.29 0 518656..519522 - 288 71282591 - CPS_0521 - hypothetical protein 498 27.59 -2 519766..520026 + 86 71277828 - CPS_0522 - hypothetical protein 499 38.07 0 520083..520694 + 203 71278352 - CPS_0523 - hydrolase, HAD-family protein 500 38.00 0 520948..521718 + 256 71279210 - CPS_0524 - hypothetical protein 501 37.36 0 521663..522481 + 272 71279799 - CPS_0525 - hypothetical protein 502 36.42 0 522537..524189 + 550 71280426 - CPS_0526 - FAD-binding protein 503 41.82 +1 524311..525111 - 266 71282188 - CPS_0527 - hypothetical protein 504 35.88 0 525408..528161 - 917 71278736 - CPS_0528 - TPR domain-containing protein 505 38.38 0 528547..528645 + 32 71278053 - CPS_0529 - hypothetical protein 506 35.65 0 529113..529328 - 71 71280166 - CPS_0530 - hypothetical protein 507 36.66 0 529237..530109 - 290 71279446 - CPS_0531 - LysR family transcriptional regulator 508 39.32 0 530204..530704 + 166 71279647 - CPS_0532 - glyoxalase family protein 509 36.72 0 531016..531546 - 176 71279122 - CPS_0533 - hypothetical protein 510 35.39 0 531556..531798 - 80 71281284 - CPS_0534 - hypothetical protein 511 38.39 0 532046..534064 + 672 71282373 - CPS_0535 - amidohydrolase family protein 512 38.44 0 534162..535865 - 567 71280071 - CPS_0536 - RNA pseudouridine synthase family protein 513 39.03 0 536253..537218 - 321 71278710 - CPS_0537 - siroheme synthase, N-terminal component 514 39.23 0 537356..537847 - 163 71277832 - CPS_0538 - ribonuclease activity regulator protein RraA 515 37.44 0 537998..538192 + 64 71282197 - CPS_0539 - hypothetical protein 516 42.63 +1 538174..539055 + 293 71282574 prmA CPS_0540 - ribosomal protein L11 methyltransferase 517 35.18 0 539224..541065 - 613 71282021 - CPS_0541 - GGDEF domain-containing protein 518 36.86 0 541142..541396 - 84 71281149 - CPS_0542 - hypothetical protein 519 40.75 0 541451..542272 - 273 71279805 - CPS_0543 - putative methylase 520 38.61 0 542440..543045 - 201 71281772 - CPS_0544 - hypothetical protein 521 35.48 0 543040..543132 + 30 71280019 - CPS_0545 - hypothetical protein 522 35.37 0 543186..544955 - 589 71280714 - CPS_0546 - GGDEF domain-containing protein 523 31.84 -1 544966..545232 - 88 71279645 - CPS_0547 - hypothetical protein 524 34.22 -1 545636..546196 - 186 71277959 - CPS_0548 - acetyltransferase 525 38.84 0 546351..547676 - 441 71278600 - CPS_0549 - hypothetical protein 526 42.28 +1 547968..548984 + 338 71281750 - CPS_0550 - NifR3/Smm1 family protein 527 38.54 0 549047..549334 + 95 71282098 fis CPS_0551 - DNA-binding protein Fis 528 40.20 0 549482..551083 + 533 71282549 purH CPS_0552 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 529 23.96 -2 551225..551320 + 31 71279503 - CPS_0553 - hypothetical protein 530 40.40 0 551595..552443 + 282 71277860 - CPS_0554 - hypothetical protein 531 42.59 +1 552484..553779 + 431 71279844 purD CPS_0555 - phosphoribosylamine--glycine ligase 532 37.25 0 556447..556650 + 67 71282018 - CPS_0558 - hypothetical protein 533 37.04 0 559657..559818 - 53 71280307 - CPS_0560 - hypothetical protein 534 37.25 0 562288..562491 + 67 71278120 - CPS_0564 - hypothetical protein 535 35.24 0 565515..565619 - 34 71278718 - CPS_0566 - hypothetical protein 536 45.16 +2 566052..566144 + 30 71280337 - CPS_0568 - hypothetical protein 537 39.33 0 566530..568614 - 694 71282302 - CPS_0569 - hypothetical protein 538 40.51 0 568730..569746 - 338 71281019 - CPS_0570 - putative lipoprotein 539 38.44 0 570057..570878 + 273 71278238 - CPS_0571 - enoyl-CoA hydratase 540 38.44 0 571278..572549 + 423 71279598 - CPS_0572 - RND family efflux transporter MFP subunit 541 41.73 +1 572646..573407 + 253 71281764 - CPS_0573 - ABC transporter, ATP-binding protein 542 39.18 0 573400..574698 + 432 71278837 - CPS_0574 - putative ABC transporter, permease protein 543 36.95 0 574720..575934 + 404 71282218 - CPS_0575 - putative ABC transporter, permease protein 544 40.52 0 576233..577540 + 435 71280249 - CPS_0576 - sigma-54 dependent DNA-binding response regulator 545 36.48 0 577551..578852 + 433 71280198 - CPS_0577 - sensor histidine kinase 546 38.74 0 579384..580511 + 375 71280804 - CPS_0578 - polysaccharide biosynthesis/export protein 547 39.78 0 580511..580975 + 154 71279552 - CPS_0579 - phosphotyrosine protein phosphatase 548 37.59 0 581041..583320 + 759 71281329 - CPS_0580 - tyrosine-protein kinase 549 32.54 -1 583458..583583 + 41 71277839 - CPS_0581 - hypothetical protein 550 29.40 -2 583573..584793 + 406 71279625 - CPS_0582 - polysaccharide biosynthesis protein 551 36.52 0 584777..586312 + 511 71278583 - CPS_0583 - hypothetical protein 552 36.94 0 586577..586687 + 36 71277900 - CPS_0584 - hypothetical protein 553 30.12 -2 586684..587835 + 383 71280593 - CPS_0585 - hypothetical protein 554 30.88 -2 588046..589188 + 380 71282361 - CPS_0586 - glycosyl transferase, group 1 family protein 555 30.79 -2 589530..590984 + 484 71279958 - CPS_0587 - hypothetical protein 556 36.86 0 590986..592119 + 377 71282194 - CPS_0588 - glycosyl transferase, group 1 family protein 557 36.23 0 592116..593081 + 321 71281833 - CPS_0589 - sugar epimerase family protein 558 34.92 0 593142..593708 + 188 71281303 - CPS_0590 - putative polysaccharide biosynthesis glycosyltransferase 559 36.85 0 593724..594890 + 388 71280758 ugd CPS_0591 - UDP-glucose 6-dehydrogenase 560 38.11 0 595062..596066 + 334 71279518 - CPS_0592 - capsular polysaccharide biosynthesis protein 561 38.29 0 596131..597018 + 295 71278999 galU1 CPS_0593 - UTP-glucose-1-phosphate uridylyltransferase 562 39.88 0 597300..599240 + 646 71278441 - CPS_0594 - polysaccharide biosynthesis protein 563 38.10 0 599413..599895 - 160 71280267 - CPS_0595 - hypothetical protein 564 37.31 0 599965..600567 - 200 71281203 - CPS_0596 - putative lipoprotein 565 39.66 0 600735..601208 - 157 71279784 - CPS_0597 - putative lipoprotein 566 39.53 0 601284..602735 - 483 71280512 - CPS_0598 - putative lipoprotein 567 36.01 0 602899..603234 + 111 71278860 - CPS_0599 - plastocyanin/azurin family copper binding protein 568 39.37 0 603497..603943 + 148 71279106 norC CPS_0600 - nitric-oxide reductase, C subunit 569 37.64 0 603947..605338 + 463 71282466 norB CPS_0601 - nitric-oxide reductase, B subunit 570 46.85 +2 605424..605534 - 36 71278081 - CPS_0602 - hypothetical protein 571 40.15 0 605760..607271 + 503 71281621 - CPS_0603 - serine carboxypeptidase 572 36.46 0 607691..608842 + 383 71281826 - CPS_0604 - hypothetical protein 573 37.30 0 608853..611096 + 747 71280301 - CPS_0605 - hypothetical protein 574 38.61 0 611378..613195 + 605 71281137 typA CPS_0606 - GTP-binding protein TypA 575 39.89 0 613524..613706 + 60 71279332 - CPS_0607 - hypothetical protein 576 41.33 0 613761..613985 - 74 71278970 - CPS_0608 - hypothetical protein 577 35.53 0 614083..614994 + 303 71281439 rbn CPS_0609 - ribonuclease BN 578 39.50 0 614991..615428 + 145 71282133 dtd CPS_0610 - D-tyrosyl-tRNA deacylase 579 43.09 +1 615689..616057 + 122 71281768 rplN CPS_0611 - ribosomal protein L14 580 37.46 0 616070..616384 + 104 71282363 rplX CPS_0612 - ribosomal protein L24 581 41.03 0 616397..616942 + 181 71280744 rplE CPS_0613 - 50S ribosomal protein L5 582 41.50 0 616947..617252 + 101 71281347 rpsN CPS_0614 - 30S ribosomal protein S14 583 40.00 0 617272..617661 + 129 71281939 rpsH CPS_0615 - ribosomal protein S8 584 40.07 0 617672..618205 + 177 71282308 rplF CPS_0616 - ribosomal protein L6 585 44.63 +1 618215..618568 + 117 71280095 rplR CPS_0617 - ribosomal protein L18 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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