version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4187 42.26 +1 4545637..4546263 - 208 71281701 upp CPS_4319 - uracil phosphoribosyltransferase 4188 35.68 0 4546449..4547384 - 311 71278739 - CPS_4320 - spermine/spermidine synthase family protein 4189 36.65 0 4547377..4548039 - 220 71280691 - CPS_4321 - hypothetical protein 4190 37.17 0 4548372..4549283 - 303 71282071 - CPS_4322 - putative zinc transporter ZitB 4191 39.13 0 4549388..4549663 + 91 71281557 - CPS_4323 - hypothetical protein 4192 39.85 0 4549785..4550996 - 403 71278693 - CPS_4324 - HlyD family type I secretion membrane fusion protein 4193 40.97 0 4550986..4553289 - 767 71278640 - CPS_4325 - ABC transporter, ATP-binding/permease protein 4194 41.24 0 4553279..4554682 - 467 71280164 - CPS_4326 - outer membrane efflux protein 4195 40.70 0 4554765..4557464 - 899 71280872 - CPS_4327 - TPR domain-containing protein 4196 47.16 +2 4557775..4564356 - 2193 71281925 - CPS_4328 - cadherin domain-containing protein 4197 34.87 0 4564356..4565069 - 237 71281570 - CPS_4329 - hypothetical protein 4198 35.71 0 4564634..4564843 - 69 71279215 - CPS_4330 - hypothetical protein 4199 28.83 -2 4565452..4565562 + 36 71279989 - CPS_4331 - hypothetical protein 4200 38.03 0 4565982..4566599 - 205 71279418 - CPS_4333 - hypothetical protein 4201 40.36 0 4566708..4568558 - 616 71282406 rpoD CPS_4334 - RNA polymerase sigma-70 factor 4202 41.24 0 4568776..4570533 - 585 71281870 dnaG CPS_4335 - DNA primase 4203 38.89 0 4570722..4571171 - 149 71278537 - CPS_4336 - GatB/YqeY domain-containing protein 4204 43.06 +1 4571223..4571438 - 71 71277960 rpsU CPS_4337 - 30S ribosomal protein S21 4205 43.81 +1 4572004..4573053 + 349 71278237 gcp CPS_4338 - O-sialoglycoprotein endopeptidase 4206 37.90 0 4573311..4573901 - 196 71279002 - CPS_4339 - putative glycerol-3-phosphate acyltransferase PlsY 4207 42.47 +1 4574057..4574428 + 123 71279339 folB CPS_4340 - dihydroneopterin aldolase 4208 39.16 0 4574428..4574925 + 165 71281323 folK3 CPS_4341 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 4209 40.17 0 4574987..4575805 + 272 71282006 uppP CPS_4342 - undecaprenyl pyrophosphate phosphatase 4210 37.72 0 4575901..4576743 + 280 71282532 - CPS_4343 - thioredoxin domain-containing protein 4211 37.28 0 4576857..4577972 - 371 71280370 - CPS_4344 - AFG1 family ATPase 4212 40.35 0 4578392..4578847 + 151 71281054 - CPS_4345 - hypothetical protein 4213 40.14 0 4578975..4580354 + 459 71279733 degP CPS_4346 - serine protease DegP 4214 38.75 0 4580492..4581562 + 356 71280084 degS CPS_4347 - serine protease DegS 4215 34.26 -1 4581706..4582350 - 214 71278306 dsbA CPS_4348 - thiol:disulfide interchange protein DsbA 4216 39.41 0 4582434..4583420 - 328 71281593 - CPS_4349 - serine/threonine protein kinase 4217 38.73 0 4583420..4584883 - 487 71281936 - CPS_4350 - iron-sulfur cluster-binding protein 4218 34.49 -1 4585070..4585414 + 114 71282183 - CPS_4351 - hypothetical protein 4219 41.00 0 4585462..4586856 - 464 71280438 - CPS_4352 - N-formimino-L-glutamate deiminase 4220 37.01 0 4586946..4587734 - 262 71281071 - CPS_4353 - N-formylglutamate deformylase 4221 34.31 -1 4587778..4587879 + 33 71280043 - CPS_4354 - hypothetical protein 4222 38.13 0 4588030..4588758 + 242 71278241 - CPS_4355 - peroxiredoxin/glutaredoxin family protein 4223 33.33 -1 4588907..4589158 + 83 71278965 - CPS_4356 - hypothetical protein 4224 40.53 0 4589287..4590147 + 286 71281483 purU4 CPS_4357 - formyltetrahydrofolate deformylase 4225 40.30 0 4590333..4590863 + 176 71282153 - CPS_4358 - glyoxalase family protein 4226 36.37 0 4591260..4592213 + 317 71280424 - CPS_4359 - LysR family substrate binding transcriptional regulator 4227 40.24 0 4592247..4592666 + 139 71278545 - CPS_4360 - hypothetical protein 4228 42.21 +1 4592913..4594331 - 472 71279636 dnaB CPS_4361 - replicative DNA helicase 4229 36.65 0 4594500..4595465 - 321 71279110 - CPS_4362 - hypothetical protein 4230 36.61 0 4595552..4596100 - 182 71279072 - CPS_4363 - hypothetical protein 4231 39.91 0 4596120..4596773 - 217 71281354 - CPS_4364 - ECF subfamily RNA polymerase sigma factor 4232 37.56 0 4597037..4597249 - 70 71280807 rpmE CPS_4365 - 50S ribosomal protein L31 4233 40.80 0 4597556..4599766 + 736 71277994 priA CPS_4366 - primosomal protein N' 4234 35.94 0 4599852..4600427 + 191 71281859 - CPS_4367 - putative cell division protein FtsN 4235 33.33 -1 4600496..4600609 - 37 71277936 - CPS_4368 - hypothetical protein 4236 41.62 +1 4600735..4601253 + 172 71279586 hslV CPS_4369 - ATP-dependent protease peptidase subunit 4237 39.41 0 4601329..4602660 + 443 71278515 hslU CPS_4370 - ATP-dependent protease ATP-binding subunit 4238 34.66 0 4602822..4603199 + 125 71277939 - CPS_4371 - hypothetical protein 4239 37.47 0 4603331..4605190 - 619 71282390 - CPS_4372 - methyl-accepting chemotaxis protein 4240 35.66 0 4605529..4607547 - 672 71281741 - CPS_4373 - GGDEF/EAL domain-containing protein 4241 41.16 0 4607758..4608255 + 165 71279667 - CPS_4374 - ribonuclease activity regulator protein RraA 4242 35.44 0 4608303..4609916 - 537 71278978 - CPS_4375 - GGDEF/EAL domain-containing protein 4243 33.33 -1 4610016..4610552 - 178 71278601 - CPS_4376 - hypothetical protein 4244 34.62 0 4610552..4612495 - 647 71277950 - CPS_4377 - hypothetical protein 4245 36.91 0 4612999..4614786 - 595 71281767 - CPS_4378 - hypothetical protein 4246 39.74 0 4614869..4615414 - 181 71282475 orn CPS_4379 - oligoribonuclease 4247 39.75 0 4615530..4616588 + 352 71280707 rsgA CPS_4380 - ribosome-associated GTPase 4248 40.38 0 4616599..4617492 + 297 71279706 psd CPS_4381 - phosphatidylserine decarboxylase 4249 39.11 0 4617639..4618019 + 126 71280698 - CPS_4382 - putative transcriptional regulator 4250 38.37 0 4618038..4620140 + 700 71278399 - CPS_4383 - TonB domain/peptidase M56 domain-containing protein 4251 37.01 0 4620237..4621241 + 334 71279258 pldB CPS_4384 - lysophospholipase L2 4252 38.41 0 4621276..4622181 - 301 71279891 - CPS_4385 - cation efflux family protein 4253 41.08 0 4622460..4622924 + 154 71277929 - CPS_4386 - RNA methyltransferase 4254 41.99 +1 4623059..4624063 - 334 71278796 gpsA CPS_4387 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 4255 38.15 0 4624112..4624609 - 165 71281405 secB CPS_4388 - preprotein translocase, SecB subunit 4256 34.10 -1 4624648..4624908 - 86 71281919 - CPS_4389 - glutaredoxin 4257 37.32 0 4624964..4625389 - 141 71279073 - CPS_4390 - rhodanese domain-containing protein 4258 42.61 +1 4625601..4627163 + 520 71279623 gpmA CPS_4391 - phosphoglyceromutase 4259 36.57 0 4627236..4628471 + 411 71278378 - CPS_4392 - M23/27 family peptidase 4260 35.51 0 4628591..4629370 + 259 71278442 - CPS_4393 - hypothetical protein 4261 39.08 0 4629427..4630191 - 254 71282538 - CPS_4394 - serine protease 4262 39.53 0 4630623..4631138 + 171 71278090 - CPS_4395 - decarboxylase domain-containing protein 4263 38.06 0 4631227..4632051 + 274 71281696 - CPS_4396 - hypothetical protein 4264 39.07 0 4632086..4633759 + 557 71282246 - CPS_4397 - FAD-binding protein 4265 35.09 0 4633870..4634721 - 283 71280355 - CPS_4398 - hypothetical protein 4266 37.44 0 4634838..4635689 - 283 71280842 - CPS_4399 - hypothetical protein 4267 41.06 0 4635763..4636176 - 137 71280077 - CPS_4400 - peptidyl-tRNA hydrolase domain-containing protein 4268 41.32 0 4636231..4636518 + 95 71277958 - CPS_4401 - endo/excinuclease amino terminal domain-containing protein 4269 37.15 0 4636630..4637337 + 235 71281742 - CPS_4402 - hypothetical protein 4270 33.90 -1 4637344..4637874 - 176 71282451 - CPS_4403 - hypothetical protein 4271 39.70 0 4638011..4638889 + 292 71282124 lig CPS_4404 - DNA ligase 4272 38.44 0 4638928..4639827 - 299 71280403 - CPS_4405 - hypothetical protein 4273 37.33 0 4639922..4641346 - 474 71280001 - CPS_4406 - sodium-dependent symporter family protein 4274 36.65 0 4641687..4642529 - 280 71278271 - CPS_4407 - hypothetical protein 4275 34.59 0 4642621..4643097 - 158 71278092 - CPS_4408 - proline-responsive regulatory protein 4276 30.67 -2 4643079..4643228 + 49 71278778 - CPS_4409 - hypothetical protein 4277 39.73 0 4643263..4647090 - 1275 71281601 putA CPS_4410 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 4278 36.38 0 4647336..4649831 - 831 71282285 - CPS_4411 - GAF domain/GGDEF domain/EAL domain-containing protein 4279 33.00 -1 4650029..4650331 - 100 71279656 - CPS_4412 - putative lipoprotein 4280 38.31 0 4650482..4651204 - 240 71280205 - CPS_4413 - putative ribosomal small subunit pseudouridine synthase A 4281 35.20 0 4651226..4651654 - 142 71278607 - CPS_4414 - hypothetical protein 4282 38.66 0 4652069..4653307 + 412 71277837 - CPS_4415 - RND family efflux transporter MFP subunit 4283 40.14 0 4653428..4654162 + 244 71281623 - CPS_4416 - ABC transporter, ATP-binding protein 4284 38.75 0 4654159..4656651 + 830 71282275 - CPS_4417 - putative ABC transporter, permease protein 4285 39.32 0 4656851..4658203 + 450 71278122 - CPS_4418 - sigma-54 dependent DNA-binding response regulator 4286 38.04 0 4658232..4659527 + 431 71278663 - CPS_4419 - sensor histidine kinase 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0