version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4057 41.67 +1 4410069..4410356 + 95 71280225 - CPS_4188 - hypothetical protein 4058 37.73 0 4410417..4412123 + 568 71278896 - CPS_4189 - spermidine synthase 4059 36.96 0 4412293..4412706 + 137 71281882 - CPS_4190 - hypothetical protein 4060 38.84 0 4412758..4413447 + 229 71281423 - CPS_4191 - PspA/IM30 family protein 4061 35.83 0 4413583..4414224 + 213 71279390 - CPS_4192 - hypothetical protein 4062 40.12 0 4414237..4414575 + 112 71280351 - CPS_4193 - hypothetical protein 4063 38.76 0 4414694..4414951 + 85 71280671 - CPS_4194 - putative major outer membrane lipoprotein 4064 37.61 0 4415061..4415972 - 303 71282503 - CPS_4195 - LysM domain-containing protein 4065 35.01 0 4415978..4417585 - 535 71281790 - CPS_4196 - putative adenylate cyclase 4066 36.63 0 4417888..4418493 + 201 71277992 - CPS_4197 - hypothetical protein 4067 34.01 -1 4418941..4419825 - 294 71282201 - CPS_4198 - putative alpha-1,2-fucosyltransferase 4068 38.58 0 4420011..4421135 + 374 71279076 gmd CPS_4199 - GDP-mannose 4,6-dehydratase 4069 35.99 0 4421149..4422090 + 313 71281547 - CPS_4200 - NAD-dependent epimerase/dehydratase family protein 4070 36.40 0 4422083..4423255 + 390 71280985 - CPS_4201 - polysaccharide biosynthesis protein 4071 36.80 0 4423389..4424483 + 364 71277966 - CPS_4202 - glycosyl transferase, group 1 family protein 4072 36.30 0 4425230..4426576 + 448 71282234 - CPS_4204 - hypothetical protein 4073 35.35 0 4426608..4427003 + 131 71279534 tagD CPS_4205 - glycerol-3-phosphate cytidyltransferase 4074 35.44 0 4427022..4428065 + 347 71280089 - CPS_4206 - CDP-glycerol:Poly(glycerophosphate) glycerophosphotransferase family protein 4075 45.83 +2 4428233..4428304 + 23 71280306 leuL CPS_4207 - putative Leu operon leader peptide 4076 39.72 0 4428459..4430039 + 526 71280884 leuA CPS_4208 - 2-isopropylmalate synthase 4077 42.52 +1 4430113..4431201 + 362 71281049 leuB CPS_4209 - 3-isopropylmalate dehydrogenase 4078 42.51 +1 4431203..4432618 + 471 71281595 leuC CPS_4210 - isopropylmalate isomerase large subunit 4079 37.35 0 4432648..4433244 + 198 71278144 leuD CPS_4211 - 3-isopropylmalate dehydratase, small subunit 4080 37.94 0 4433359..4435050 - 563 71280580 - CPS_4212 - putative general secretion pathway protein A 4081 39.20 0 4435217..4437382 + 721 71279226 - CPS_4213 - putative ferric aerobactin receptor 4082 35.61 0 4437389..4437520 + 43 71278619 - CPS_4214 - hypothetical protein 4083 41.11 0 4437501..4438838 + 445 71282596 cca CPS_4215 - tRNA nucleotidyltransferase 4084 40.28 0 4439081..4439656 + 191 71281904 - CPS_4216 - hypothetical protein 4085 40.28 0 4439697..4440272 - 191 71281254 - CPS_4217 - 2OG-Fe(II) oxygenase family oxidoreductase 4086 39.13 0 4440364..4440777 - 137 71280569 - CPS_4218 - hypothetical protein 4087 40.67 0 4441249..4443060 - 603 71278993 nirTB CPS_4219 - denitrification system component NirT/cytochrome c552 4088 40.09 0 4443352..4444980 - 542 71279389 nirS CPS_4220 - nitrite reductase 4089 33.86 -1 4445380..4445946 + 188 71282489 - CPS_4221 - hemerythrin family protein 4090 40.59 0 4446298..4446669 + 123 71280331 nirC CPS_4222 - c-type cytochrome c55x 4091 41.22 0 4446791..4448032 + 413 71279697 - CPS_4223 - nirF protein 4092 40.75 0 4448035..4449153 + 372 71280163 - CPS_4224 - putative heme biosynthesis protein 4093 40.35 0 4449146..4449658 + 170 71278672 - CPS_4225 - putative heme biosynthesis protein 4094 38.04 0 4449748..4450299 + 183 71279515 - CPS_4226 - putative heme biosythesis protein 4095 39.25 0 4450668..4451900 + 410 71282516 - CPS_4227 - putative heme biosynthesis protein 4096 40.05 0 4452038..4452916 + 292 71281489 cobA2 CPS_4228 - uroporphyrin-III C-methyltransferase 4097 40.82 0 4453209..4454837 + 542 71278461 nirN CPS_4229 - heme-binding protein NirN 4098 37.51 0 4455106..4455966 + 286 71282622 - CPS_4230 - hypothetical protein 4099 33.93 -1 4456002..4457006 - 334 71280155 - CPS_4231 - TPR domain-containing protein 4100 41.67 +1 4457434..4457889 + 151 71279462 - CPS_4232 - hypothetical protein 4101 37.96 0 4457928..4458791 + 287 71280895 - CPS_4233 - UbiA prenyltransferase family protein 4102 37.99 0 4458885..4460711 - 608 71279974 - CPS_4234 - hypothetical protein 4103 43.26 +1 4460867..4461742 - 291 71279547 - CPS_4235 - membrane protein 4104 36.96 0 4462164..4462742 + 192 71279092 - CPS_4236 - hemerythrin family protein 4105 38.78 0 4462873..4464945 - 690 71281299 - CPS_4237 - RecQ domain-containing protein 4106 40.24 0 4464949..4466454 - 501 71280566 - CPS_4238 - hypothetical protein 4107 36.94 0 4466455..4467174 - 239 71282449 - CPS_4239 - hypothetical protein 4108 39.66 0 4467378..4467725 - 115 71281779 - CPS_4240 - L-PSP family endoribonuclease 4109 39.16 0 4468063..4469640 - 525 71279202 guaA CPS_4241 - bifunctional GMP synthase/glutamine amidotransferase protein 4110 41.00 0 4469992..4471464 - 490 71278503 guaB CPS_4242 - inositol-5-monophosphate dehydrogenase 4111 22.22 -2 4471504..4471638 + 44 71280729 - CPS_4243 - hypothetical protein 4112 37.90 0 4471685..4473019 + 444 71281697 xseA CPS_4244 - exodeoxyribonuclease VII large subunit 4113 34.73 0 4473133..4474566 + 477 71280812 - CPS_4245 - GGDEF domain-containing protein 4114 38.37 0 4474558..4475232 - 224 71281324 - CPS_4246 - hypothetical protein 4115 39.95 0 4475330..4476826 - 498 71279565 engA CPS_4247 - GTP-binding protein EngA 4116 40.58 0 4477079..4477216 + 45 71281293 - CPS_4248 - hypothetical protein 4117 39.44 0 4477310..4478554 - 414 71279719 - CPS_4249 - outer membrane protein assembly complex subunit YfgL 4118 39.14 0 4478606..4479277 - 223 71279045 - CPS_4250 - hypothetical protein 4119 40.12 0 4479301..4480581 - 426 71281687 hisS CPS_4251 - histidyl-tRNA synthetase 4120 39.88 0 4480764..4481894 - 376 71278491 ispG CPS_4252 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4121 39.17 0 4481962..4482954 - 330 71280611 - CPS_4253 - hypothetical protein 4122 38.22 0 4482947..4484521 - 524 71278988 - CPS_4254 - lysM domain-containing protein 4123 38.67 0 4484597..4485757 - 386 71278436 - CPS_4255 - hypothetical protein 4124 40.05 0 4486025..4486456 - 143 71277786 ndk CPS_4256 - nucleoside diphosphate kinase 4125 33.78 -1 4486493..4486714 - 73 71281963 - CPS_4257 - hypothetical protein 4126 40.04 0 4487165..4488580 + 471 71278828 - CPS_4258 - hypothetical protein 4127 40.59 0 4488598..4490223 + 541 71281260 - CPS_4259 - AMP-binding protein 4128 36.92 0 4490690..4492699 + 669 71280706 - CPS_4260 - sensor histidine kinase/response regulator 4129 39.03 0 4492724..4493425 + 233 71279900 - CPS_4261 - DNA-binding response regulator 4130 40.91 0 4493556..4495244 - 562 71279383 sfcA CPS_4262 - malate dehydrogenase 4131 42.03 +1 4495507..4495713 - 68 71282568 - CPS_4263 - hypothetical protein 4132 40.09 0 4496079..4496537 + 152 71279037 - CPS_4264 - AsnC family transcriptional regulator 4133 34.53 -1 4496677..4497597 - 306 71279560 - CPS_4265 - hypothetical protein 4134 35.27 0 4497792..4498049 + 85 71277918 - CPS_4266 - hypothetical protein 4135 39.09 0 4498201..4500441 - 746 71278446 dcp CPS_4267 - peptidyl-dipeptidase Dcp 4136 38.21 0 4501006..4501374 - 122 71280754 - CPS_4268 - hypothetical protein 4137 20.83 -2 4501508..4501627 - 39 71281269 - CPS_4269 - hypothetical protein 4138 36.65 0 4501728..4503263 + 511 71280602 - CPS_4270 - sensor histidine kinase 4139 32.50 -1 4503260..4503859 + 199 71281120 - CPS_4271 - hypothetical protein 4140 39.08 0 4503875..4505248 + 457 71277923 - CPS_4272 - sigma-54 dependent response regulator 4141 39.13 0 4505300..4505437 + 45 71278368 - CPS_4273 - hypothetical protein 4142 41.67 +1 4505475..4505618 - 47 71282033 - CPS_4274 - hypothetical protein 4143 36.36 0 4505631..4507214 - 527 71282588 - CPS_4275 - TPR domain/sulfotransferase domain-containing protein 4144 41.55 +1 4507618..4510014 - 798 71281321 - CPS_4276 - TonB-dependent receptor 4145 36.68 0 4510583..4511509 - 308 71281836 - CPS_4277 - hypothetical protein 4146 41.01 0 4511583..4512272 - 229 71279218 - CPS_4278 - putative carboxylesterase 4147 38.98 0 4512368..4513306 - 312 71282151 - CPS_4279 - LysR family transcriptional regulator 4148 29.63 -2 4513284..4513391 - 35 71281388 - CPS_4280 - hypothetical protein 4149 38.10 0 4513537..4513851 + 104 71280687 trx3 CPS_4281 - thioredoxin 4150 35.56 0 4513864..4513953 - 29 71279096 - CPS_4282 - hypothetical protein 4151 40.88 0 4514040..4515245 + 401 71280853 - CPS_4283 - hypothetical protein 4152 38.16 0 4515389..4516342 + 317 71278159 - CPS_4284 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 4153 37.00 0 4516447..4517019 + 190 71278696 - CPS_4285 - acetyltransferase 4154 37.95 0 4517069..4517371 - 100 71281714 - CPS_4286 - hypothetical protein 4155 38.74 0 4517431..4517541 - 36 71282253 - CPS_4287 - hypothetical protein 4156 40.41 0 4517517..4518194 - 225 71278897 ung CPS_4288 - uracil-DNA glycosylase 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0