version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3795 37.16 0 4093604..4094230 + 208 71280575 - CPS_3919 - putative type IV pilus biogenesis protein 3796 39.24 0 4094394..4094630 - 78 71282393 - CPS_3920 - RNA-binding protein 3797 32.46 -1 4094772..4095116 + 114 71281774 - CPS_3921 - putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase 3798 32.15 -1 4095241..4096335 - 364 71278036 - CPS_3922 - GGDEF domain-containing protein 3799 35.79 0 4096525..4097418 - 297 71279665 - CPS_3923 - sensory box protein 3800 35.42 0 4097525..4100785 - 1086 71277969 - CPS_3924 - sensory box protein 3801 37.88 0 4101646..4103670 + 674 71280779 - CPS_3925 - methyl-accepting chemotaxis protein 3802 40.94 0 4103873..4106962 - 1029 71281350 - CPS_3926 - AcrB/AcrD/AcrF family protein 3803 40.97 0 4106962..4108140 - 392 71280404 - CPS_3927 - RND family efflux transporter MFP subunit 3804 37.22 0 4108608..4109456 + 282 71280600 - CPS_3928 - hypothetical protein 3805 39.20 0 4109806..4111323 + 505 71279028 - CPS_3929 - methyl-accepting chemotaxis protein 3806 40.00 0 4111342..4111896 + 184 71281076 - CPS_3930 - cytochrome b561 family protein 3807 39.67 0 4111893..4114037 - 714 71278854 - CPS_3931 - hypothetical protein 3808 43.24 +1 4114363..4115946 + 527 71278323 - CPS_3932 - alkaline phosphatase family protein 3809 42.63 +1 4115971..4117821 + 616 71282312 - CPS_3933 - alkaline phosphatase family protein 3810 37.18 0 4117969..4118721 + 250 71277884 - CPS_3934 - hypothetical protein 3811 41.40 0 4118826..4120337 - 503 71277951 - CPS_3935 - GntR family transcriptional regulator 3812 37.98 0 4120443..4121066 + 207 71279707 - CPS_3936 - acetyltransferase 3813 39.31 0 4121053..4121721 + 222 71281478 - CPS_3937 - hypothetical protein 3814 36.34 0 4121831..4123027 - 398 71282570 - CPS_3938 - hypothetical protein 3815 40.49 0 4123394..4125070 - 558 71282028 - CPS_3939 - pyridoxamine 5'-phosphate oxidase / oxidoreductase, NAD-dependent 3816 40.66 0 4125241..4125786 - 181 71281156 - CPS_3940 - alkylhydroperoxidase 3817 40.11 0 4126067..4126966 + 299 71278424 - CPS_3941 - LysR family transcriptional regulator 3818 29.09 -2 4127371..4127535 + 54 71278047 - CPS_3942 - hypothetical protein 3819 40.58 0 4128332..4128538 + 68 71281016 - CPS_3943 - hypothetical protein 3820 33.33 -1 4128798..4129142 - 114 71281556 - CPS_3944 - hypothetical protein 3821 36.40 0 4129245..4130156 + 303 71278689 - CPS_3945 - LysR family transcriptional regulator 3822 37.60 0 4130412..4130786 - 124 71279527 - CPS_3946 - hypothetical protein 3823 40.83 0 4130917..4131276 - 119 71278008 - CPS_3947 - hypothetical protein 3824 34.25 -1 4131688..4132122 - 144 71278409 - CPS_3948 - hypothetical protein 3825 33.33 -1 4132087..4132227 + 46 71281577 - CPS_3949 - hypothetical protein 3826 34.98 0 4132461..4134161 - 566 71282577 - CPS_3950 - response regulator/GGDEF domain-containing protein 3827 38.30 0 4134238..4134660 - 140 71280813 - CPS_3951 - response regulator 3828 36.02 0 4134704..4136488 - 594 71280278 - CPS_3952 - sensor histidine kinase 3829 39.18 0 4136781..4137926 - 381 71281624 tyrA CPS_3953 - bifunctional chorismate mutase/prephenate dehydrogenase 3830 42.23 +1 4138113..4139180 - 355 71282192 aroF CPS_3954 - phospho-2-dehydro-3-deoxyheptonate aldolase 3831 40.78 0 4139779..4141725 - 648 71280294 acs CPS_3955 - acetyl-CoA synthetase 3832 32.59 -1 4142080..4142214 + 44 71280945 - CPS_3956 - hypothetical protein 3833 39.11 0 4142226..4144838 - 870 71279516 - CPS_3957 - TonB-dependent receptor 3834 38.37 0 4145052..4146242 - 396 71280103 - CPS_3958 - putative regulatory protein 3835 37.99 0 4146285..4146842 - 185 71278716 - CPS_3959 - sigma-70 family RNA polymerase sigma factor 3836 39.43 0 4147119..4149449 - 776 71278168 nagZ1 CPS_3960 - beta-hexosaminidase 3837 40.39 0 4149641..4152148 - 835 71278302 - CPS_3961 - TonB-dependent receptor 3838 29.17 -2 4152356..4152475 - 39 71281468 - CPS_3962 - hypothetical protein 3839 35.85 0 4152507..4152824 - 105 71279348 - CPS_3963 - hypothetical protein 3840 41.27 0 4152998..4153954 - 318 71280323 pip2 CPS_3964 - proline iminopeptidase 3841 37.30 0 4154040..4154417 - 125 71279537 - CPS_3965 - hypothetical protein 3842 37.72 0 4154615..4155823 - 402 71281706 - CPS_3966 - kelch domain-containing protein 3843 38.38 0 4156045..4157154 - 369 71278645 - CPS_3967 - hypothetical protein 3844 42.35 +1 4157523..4159895 - 790 71281688 - CPS_3968 - penicillin-binding protein 3845 41.10 0 4159945..4164942 - 1665 71281864 - CPS_3969 - putative lipoprotein 3846 42.67 +1 4165038..4165262 - 74 71277975 - CPS_3970 - hypothetical protein 3847 39.27 0 4165451..4166815 - 454 71280795 - CPS_3971 - TPR domain-containing protein 3848 44.05 +1 4166889..4167560 - 223 71281356 - CPS_3972 - putative TonB protein 3849 39.66 0 4167581..4167991 - 136 71279634 exbD3 CPS_3973 - biopolymer transport exbD protein 3850 42.23 +1 4168068..4168595 - 175 71280778 exbB3 CPS_3974 - biopolymer transport exbB protein 3851 40.25 0 4168599..4169972 - 457 71278525 - CPS_3975 - MotA/TolQ/ExbB proton channel family protein 3852 40.27 0 4170089..4170910 - 273 71279098 - CPS_3976 - hypothetical protein 3853 39.20 0 4171460..4172431 - 323 71282259 - CPS_3977 - LysR family transcriptional regulator 3854 41.25 0 4172477..4173676 + 399 71281629 - CPS_3978 - oxidoreductase, FAD/FMN-binding 3855 39.52 0 4173857..4174066 + 69 71278768 - CPS_3979 - putative lipoprotein 3856 40.49 0 4174199..4175902 - 567 71278118 - CPS_3980 - sulfate permease family protein 3857 38.25 0 4175915..4178131 - 738 71279576 - CPS_3981 - sensor histidine kinase 3858 38.49 0 4178133..4178849 - 238 71278729 - CPS_3982 - DNA-binding response regulator 3859 35.35 0 4178875..4178973 - 32 71280654 - CPS_3983 - hypothetical protein 3860 40.02 0 4179138..4179974 + 278 71280451 - CPS_3984 - ompA family protein 3861 36.56 0 4180183..4180275 - 30 71281669 - CPS_3985 - hypothetical protein 3862 35.84 0 4180359..4181036 - 225 71281020 - CPS_3986 - hypothetical protein 3863 40.39 0 4181266..4182654 - 462 71281366 - CPS_3987 - Ser/Thr protein phosphatase family protein 3864 39.50 0 4182753..4185590 - 945 71277789 - CPS_3988 - TonB-dependent receptor 3865 37.14 0 4185624..4185728 + 34 71280203 - CPS_3989 - hypothetical protein 3866 37.71 0 4185982..4186917 + 311 71281653 - CPS_3990 - GGDEF domain-containing protein 3867 38.98 0 4186917..4187978 + 353 71279827 - CPS_3991 - AraC family transcriptional regulator 3868 40.28 0 4187999..4188631 - 210 71278996 - CPS_3992 - hypothetical protein 3869 42.17 +1 4188889..4191582 - 897 71278588 - CPS_3993 - TonB-dependent receptor 3870 42.63 +1 4191761..4194664 - 967 71278022 - CPS_3994 - putative lipoprotein 3871 40.66 0 4194924..4196261 - 445 71281748 amt CPS_3995 - ammonium transporter 3872 42.49 +1 4196515..4197453 + 312 71281546 hemF CPS_3996 - coproporphyrinogen III oxidase 3873 35.62 0 4197528..4197746 - 72 71278500 - CPS_3997 - hypothetical protein 3874 40.44 0 4197953..4198177 - 74 71279488 - CPS_3998 - phage integrase family site specific recombinase 3875 42.59 +1 4198174..4198281 - 35 71279043 - CPS_3999 - hypothetical protein 3876 44.81 +1 4198332..4198514 - 60 71281107 - CPS_4000 - hypothetical protein 3877 36.56 0 4198906..4199805 + 299 71280735 - CPS_4001 - hypothetical protein 3878 43.47 +1 4199891..4200748 + 285 71282181 - CPS_4002 - hypothetical protein 3879 39.50 0 4201041..4201964 - 307 71281789 - CPS_4003 - membrane protein 3880 39.09 0 4202066..4202656 + 196 71278787 - CPS_4004 - TetR family transcriptional regulator 3881 41.87 +1 4202738..4203475 + 245 71279973 - CPS_4005 - carboxymethylenebutenolidase family protein 3882 39.20 0 4203955..4205181 + 408 71281064 - CPS_4006 - hypothetical protein 3883 39.15 0 4205344..4205790 - 148 71280504 - CPS_4007 - MarR family transcriptional regulator 3884 42.64 +1 4205874..4206593 - 239 71282121 - CPS_4008 - hypothetical protein 3885 41.13 0 4206642..4207859 - 405 71282514 - CPS_4009 - putative transporter, BCCT family protein 3886 44.25 +1 4207978..4209663 - 561 71278669 betA2 CPS_4010 - choline dehydrogenase 3887 45.08 +2 4209714..4211177 - 487 71279384 betB2 CPS_4011 - betaine aldehyde dehydrogenase 3888 39.44 0 4211164..4211769 - 201 71279521 betI2 CPS_4012 - transcriptional regulator BetI 3889 43.61 +1 4212467..4213663 - 398 71278752 - CPS_4013 - hypothetical protein 3890 45.58 +2 4213827..4214618 - 263 71279473 - CPS_4014 - hypothetical protein 3891 45.66 +2 4214605..4215618 - 337 71279631 - CPS_4015 - putative electron transfer flavoprotein, alpha subunit 3892 43.96 +1 4215852..4217837 - 661 71280367 - CPS_4016 - iron-sulfur cluster-binding protein 3893 43.67 +1 4217957..4220017 - 686 71281654 - CPS_4017 - oxidoreductase, FAD/FMN-binding 3894 40.72 0 4220066..4220620 - 184 71278180 - CPS_4018 - hypothetical protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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