version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3718 40.74 0 4003130..4004128 + 332 71280808 - CPS_3838 - quinol oxidase, subunit II 3719 37.26 0 4004354..4006264 - 636 71279880 - CPS_3839 - methyl-accepting chemotaxis protein 3720 32.68 -1 4006328..4007095 - 255 71279184 - CPS_3840 - putative lipoprotein 3721 42.29 +1 4007524..4008651 - 375 71278482 gcvT2 CPS_3841 - glycine cleavage system T protein 3722 42.08 +1 4008712..4010094 - 460 71281204 - CPS_3842 - amino acid/cation symporter 3723 43.49 +1 4010426..4011055 - 209 71277752 - CPS_3843 - DNA-binding protein 3724 42.05 +1 4011509..4012804 + 431 71277781 glyA3 CPS_3844 - serine hydroxymethyltransferase 3725 40.05 0 4012856..4013242 + 128 71279650 gcvH2 CPS_3845 - glycine cleavage system H protein 3726 41.69 +1 4013294..4016164 + 956 71281560 gcvP2 CPS_3846 - glycine dehydrogenase 3727 37.46 0 4016256..4017320 + 354 71281946 - CPS_3847 - porin 3728 37.76 0 4017528..4018001 - 157 71281417 - CPS_3848 - peptidyl-prolyl cis-trans isomerase, FKBP-type 3729 35.94 0 4018216..4018560 + 114 71280586 - CPS_3849 - putative lipoprotein 3730 37.16 0 4018642..4019634 - 330 71279763 - CPS_3850 - hypothetical protein 3731 38.68 0 4019740..4020450 - 236 71281517 - CPS_3851 - hypothetical protein 3732 38.07 0 4020443..4021012 - 189 71278823 - CPS_3852 - sigma-70 family RNA polymerase sigma factor 3733 41.25 0 4021308..4022318 - 336 71280739 - CPS_3853 - alcohol dehydrogenase, zinc-containing 3734 38.71 0 4022748..4023974 - 408 71280354 - CPS_3854 - hypothetical protein 3735 34.34 -1 4024284..4024382 - 32 71281619 - CPS_3855 - hypothetical protein 3736 39.67 0 4024927..4025652 + 241 71278775 - CPS_3856 - hypothetical protein 3737 41.46 0 4025839..4025961 + 40 71280431 - CPS_3857 - hypothetical protein 3738 41.80 +1 4026225..4026602 - 125 71282330 - CPS_3858 - L-PSP family endoribonuclease 3739 32.35 -1 4026607..4026708 - 33 71281477 - CPS_3859 - hypothetical protein 3740 41.99 +1 4026757..4028316 - 519 71280398 - CPS_3860 - BCCT family transporter 3741 42.64 +1 4028459..4029457 - 332 71282567 - CPS_3861 - M19 family peptidase 3742 42.76 +1 4029472..4030914 - 480 71281462 - CPS_3862 - aldehyde dehydrogenase family protein 3743 39.94 0 4031005..4031928 + 307 71278659 - CPS_3863 - LysR family transcriptional regulator 3744 38.08 0 4032241..4033947 + 568 71278287 - CPS_3864 - methyl-accepting chemotaxis protein 3745 41.18 0 4034003..4034104 - 33 71280380 - CPS_3865 - hypothetical protein 3746 36.61 0 4034228..4034410 - 60 71281099 - CPS_3866 - hypothetical protein 3747 43.33 +1 4034936..4036645 + 569 71278911 - CPS_3867 - hypothetical protein 3748 39.67 0 4036667..4037392 + 241 71282172 - CPS_3868 - hypothetical protein 3749 43.69 +1 4037731..4038522 + 263 71282023 - CPS_3869 - formate dehydrogenase family accessory protein FdhD 3750 42.16 +1 4038536..4040845 + 769 71281164 - CPS_3870 - oxidoreductase, alpha/molybdopterin subunit 3751 38.53 0 4041230..4043596 - 788 71278361 - CPS_3871 - putative sensor histidine kinase 3752 41.18 0 4043798..4045786 + 662 71282581 tkt CPS_3872 - transketolase 3753 40.10 0 4045898..4046917 + 339 71278354 epd CPS_3873 - D-erythrose 4-phosphate dehydrogenase 3754 40.48 0 4046986..4048161 + 391 71280637 pgk CPS_3874 - phosphoglycerate kinase 3755 26.13 -2 4048204..4048314 + 36 71281918 - CPS_3875 - hypothetical protein 3756 40.75 0 4048601..4049665 + 354 71282271 fba CPS_3876 - fructose-1,6-bisphosphate aldolase 3757 36.27 0 4049805..4050689 + 294 71278311 - CPS_3877 - hypothetical protein 3758 36.27 0 4050719..4051297 - 192 71278884 - CPS_3878 - hypothetical protein 3759 34.75 0 4051481..4052188 - 235 71282592 - CPS_3879 - putative ABC transporter, periplasmic substrate-binding protein 3760 18.75 -2 4052208..4052303 - 31 71278417 - CPS_3880 - hypothetical protein 3761 43.59 +1 4052480..4052596 - 38 71277804 - CPS_3881 - hypothetical protein 3762 32.60 -1 4052726..4055176 + 816 71279842 - CPS_3882 - leucine-rich repeat-containing protein 3763 40.36 0 4055352..4057031 + 559 71279997 - CPS_3883 - putative ABC transporter ATP-binding protein 3764 32.23 -1 4057228..4057590 + 120 71278427 - CPS_3884 - hypothetical protein 3765 38.35 0 4057681..4058178 + 165 71277769 - CPS_3885 - ACT domain-containing protein 3766 40.53 0 4058349..4060292 - 647 71279869 - CPS_3886 - ATP-dependent helicase 3767 39.08 0 4060348..4060695 - 115 71279147 - CPS_3887 - hypothetical protein 3768 39.58 0 4061049..4061096 + 15 71280161 hisL CPS_3888 - His operon leader peptide 3769 40.31 0 4061309..4062211 + 300 71279395 hisG CPS_3889 - ATP phosphoribosyltransferase 3770 41.84 +1 4062401..4063705 + 434 71281089 hisD2 CPS_3890 - histidinol dehydrogenase 3771 38.30 0 4063762..4064868 + 368 71280715 hisC CPS_3891 - histidinol-phosphate aminotransferase 3772 39.41 0 4064924..4066009 + 361 71282446 hisB CPS_3892 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 3773 38.35 0 4066021..4066698 + 225 71281927 hisH CPS_3893 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3774 39.95 0 4066695..4067480 + 261 71277867 hisA CPS_3894 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 3775 39.25 0 4067480..4068256 + 258 71281800 hisF CPS_3895 - imidazole glycerol phosphate synthase subunit HisF 3776 40.10 0 4068250..4068870 + 206 71280385 hisI CPS_3896 - phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase 3777 38.27 0 4068998..4069888 + 296 71278612 - CPS_3897 - hypothetical protein 3778 34.34 -1 4070024..4070320 + 98 71279247 - CPS_3898 - hypothetical protein 3779 38.12 0 4070342..4070821 + 159 71279772 - CPS_3899 - acetyltransferase 3780 41.40 0 4070889..4071533 - 214 71279627 - CPS_3900 - adenylate kinase 3781 37.82 0 4071788..4073749 - 653 71282161 htpG CPS_3901 - heat shock protein 90 3782 30.83 -2 4074878..4074997 - 39 71278925 - CPS_3903 - hypothetical protein 3783 34.87 0 4078046..4078306 - 86 71280028 - CPS_3905 - hypothetical protein 3784 24.76 -2 4080941..4081045 - 34 71280711 - CPS_3908 - hypothetical protein 3785 41.13 0 4081078..4084206 + 1042 71282552 - CPS_3909 - serine protease 3786 34.30 -1 4084900..4085418 - 172 71281839 - CPS_3910 - hypothetical protein 3787 30.00 -2 4085427..4085546 - 39 71278413 - CPS_3911 - hypothetical protein 3788 33.95 -1 4085820..4086305 + 161 71279825 - CPS_3912 - hypothetical protein 3789 40.02 0 4086397..4088982 - 861 71281252 clpB CPS_3913 - ATP-dependent chaperone protein ClpB 3790 38.53 0 4089118..4090002 - 294 71281218 - CPS_3914 - hypothetical protein 3791 41.03 0 4089983..4090957 - 324 71280552 rluD CPS_3915 - 23S rRNA pseudouridine synthase D 3792 38.74 0 4091132..4091890 + 252 71282332 - CPS_3916 - putative lipoprotein 3793 36.87 0 4092177..4092515 - 112 71278680 - CPS_3917 - nitrogen regulatory protein P-II 3794 39.48 0 4092666..4093511 + 281 71280832 nadE CPS_3918 - NAD synthetase 3795 37.16 0 4093604..4094230 + 208 71280575 - CPS_3919 - putative type IV pilus biogenesis protein 3796 39.24 0 4094394..4094630 - 78 71282393 - CPS_3920 - RNA-binding protein 3797 32.46 -1 4094772..4095116 + 114 71281774 - CPS_3921 - putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase 3798 32.15 -1 4095241..4096335 - 364 71278036 - CPS_3922 - GGDEF domain-containing protein 3799 35.79 0 4096525..4097418 - 297 71279665 - CPS_3923 - sensory box protein 3800 35.42 0 4097525..4100785 - 1086 71277969 - CPS_3924 - sensory box protein 3801 37.88 0 4101646..4103670 + 674 71280779 - CPS_3925 - methyl-accepting chemotaxis protein 3802 40.94 0 4103873..4106962 - 1029 71281350 - CPS_3926 - AcrB/AcrD/AcrF family protein 3803 40.97 0 4106962..4108140 - 392 71280404 - CPS_3927 - RND family efflux transporter MFP subunit 3804 37.22 0 4108608..4109456 + 282 71280600 - CPS_3928 - hypothetical protein 3805 39.20 0 4109806..4111323 + 505 71279028 - CPS_3929 - methyl-accepting chemotaxis protein 3806 40.00 0 4111342..4111896 + 184 71281076 - CPS_3930 - cytochrome b561 family protein 3807 39.67 0 4111893..4114037 - 714 71278854 - CPS_3931 - hypothetical protein 3808 43.24 +1 4114363..4115946 + 527 71278323 - CPS_3932 - alkaline phosphatase family protein 3809 42.63 +1 4115971..4117821 + 616 71282312 - CPS_3933 - alkaline phosphatase family protein 3810 37.18 0 4117969..4118721 + 250 71277884 - CPS_3934 - hypothetical protein 3811 41.40 0 4118826..4120337 - 503 71277951 - CPS_3935 - GntR family transcriptional regulator 3812 37.98 0 4120443..4121066 + 207 71279707 - CPS_3936 - acetyltransferase 3813 39.31 0 4121053..4121721 + 222 71281478 - CPS_3937 - hypothetical protein 3814 36.34 0 4121831..4123027 - 398 71282570 - CPS_3938 - hypothetical protein 3815 40.49 0 4123394..4125070 - 558 71282028 - CPS_3939 - pyridoxamine 5'-phosphate oxidase / oxidoreductase, NAD-dependent 3816 40.66 0 4125241..4125786 - 181 71281156 - CPS_3940 - alkylhydroperoxidase 3817 40.11 0 4126067..4126966 + 299 71278424 - CPS_3941 - LysR family transcriptional regulator 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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