version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3673 39.93 0 3954815..3956224 - 469 71280239 cysS CPS_3792 - cysteinyl-tRNA synthetase 3674 37.60 0 3956390..3956881 + 163 71280918 ppiB CPS_3793 - peptidyl-prolyl cis-trans isomerase B 3675 38.15 0 3956897..3957643 + 248 71281565 lpxH CPS_3794 - UDP-2,3-diacylglucosamine hydrolase 3676 37.19 0 3957742..3958518 - 258 71282063 miaE CPS_3795 - tRNA-(MS[2]IO[6]A)-hydroxylase 3677 36.80 0 3958725..3958955 + 76 71278863 - CPS_3796 - hypothetical protein 3678 39.67 0 3959172..3959771 + 199 71278423 - CPS_3797 - hypothetical protein 3679 38.60 0 3959910..3961427 - 505 71281500 purF CPS_3798 - amidophosphoribosyltransferase 3680 38.10 0 3961598..3962080 - 160 71282382 cvpA CPS_3799 - colicin V production protein 3681 37.40 0 3962171..3962785 - 204 71280410 dedD CPS_3800 - dedD protein 3682 37.44 0 3962813..3964126 - 437 71281271 folC CPS_3801 - folC bifunctional protein 3683 39.74 0 3964186..3965043 - 285 71279494 accD CPS_3802 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 3684 39.62 0 3965207..3965986 - 259 71280165 truA CPS_3803 - tRNA pseudouridine synthase A 3685 39.01 0 3966344..3969832 - 1162 71279596 - CPS_3804 - hypothetical protein 3686 37.45 0 3970216..3971235 - 339 71279604 asd CPS_3805 - aspartate-semialdehyde dehydrogenase 3687 38.66 0 3971294..3972475 - 393 71279093 pdxB CPS_3806 - erythronate-4-phosphate dehydrogenase 3688 40.51 0 3972671..3973882 - 403 71281360 fabB CPS_3807 - 3-oxoacyl-(acyl-carrier-protein) synthase I 3689 38.07 0 3974140..3976188 + 682 71280536 - CPS_3808 - hypothetical protein 3690 35.50 0 3976348..3977178 + 276 71282224 - CPS_3809 - hypothetical protein 3691 34.34 -1 3977239..3977535 - 98 71278111 - CPS_3810 - hypothetical protein 3692 40.29 0 3977735..3978898 - 387 71280183 - CPS_3811 - putative inorganic polyphosphate/ATP-NAD kinase 3693 38.07 0 3978885..3979454 - 189 71279474 - CPS_3812 - hypothetical protein 3694 36.64 0 3979700..3980032 - 110 71280847 - CPS_3813 - putative monovalent cation/H+ antiporter subunit G 3695 37.04 0 3980043..3980312 - 89 71279289 - CPS_3814 - putative monovalent cation/H+ antiporter subunit F 3696 40.41 0 3980306..3980842 - 178 71280419 - CPS_3815 - putative monovalent cation/H+ antiporter subunit E 3697 41.96 +1 3980842..3982359 - 505 71281109 - CPS_3816 - putative monovalent cation/H+ antiporter subunit D 3698 38.44 0 3982356..3982727 - 123 71278728 - CPS_3817 - putative monovalent cation/H+ antiporter subunit C 3699 39.99 0 3982727..3985519 - 930 71278639 - CPS_3818 - putative monovalent cation/H+ antiporter subunit A 3700 35.68 0 3985801..3986268 + 155 71277905 - CPS_3819 - AsnC family transcriptional regulator 3701 42.22 +1 3986369..3987505 - 378 71282171 dnaJ CPS_3820 - chaperone protein DnaJ 3702 40.17 0 3987727..3989643 - 638 71280911 dnaK2 CPS_3821 - chaperone protein DnaK 3703 34.14 -1 3989861..3990355 - 164 71279960 - CPS_3822 - putative thioredoxin 3704 38.57 0 3990524..3991153 - 209 71280635 grpE CPS_3823 - co-chaperone GrpE 3705 39.91 0 3991311..3992192 + 293 71278421 ppnK CPS_3824 - inorganic polyphosphate/ATP-NAD kinase 3706 38.49 0 3992341..3994026 + 561 71279572 recN CPS_3825 - DNA repair protein RecN 3707 36.32 0 3994220..3994654 + 144 71282587 - CPS_3826 - SmpA/OmlA family protein 3708 39.14 0 3994760..3995155 - 131 71278235 - CPS_3827 - hypothetical protein 3709 35.37 0 3995158..3995598 - 146 71280494 - CPS_3828 - aromatic rich family protein 3710 36.40 0 3996097..3996585 + 162 71281025 smpB CPS_3829 - SsrA-binding protein 3711 35.91 0 3997447..3998571 - 374 71279731 - CPS_3831 - hypothetical protein 3712 40.80 0 3998825..3999025 - 66 71281275 - CPS_3832 - hypothetical protein 3713 39.65 0 3999142..3999822 - 226 71279031 - CPS_3833 - hypothetical protein 3714 36.02 0 4000249..4000806 + 185 71278123 - CPS_3834 - putative hypoxanthine phosphoribosyltransferase 3715 33.33 -1 4000890..4000988 - 32 71278877 - CPS_3835 - hypothetical protein 3716 40.29 0 4001122..4001667 + 181 71282428 - CPS_3836 - hypothetical protein 3717 40.98 0 4001764..4003137 + 457 71281862 - CPS_3837 - quinol oxidase, subunit I 3718 40.74 0 4003130..4004128 + 332 71280808 - CPS_3838 - quinol oxidase, subunit II 3719 37.26 0 4004354..4006264 - 636 71279880 - CPS_3839 - methyl-accepting chemotaxis protein 3720 32.68 -1 4006328..4007095 - 255 71279184 - CPS_3840 - putative lipoprotein 3721 42.29 +1 4007524..4008651 - 375 71278482 gcvT2 CPS_3841 - glycine cleavage system T protein 3722 42.08 +1 4008712..4010094 - 460 71281204 - CPS_3842 - amino acid/cation symporter 3723 43.49 +1 4010426..4011055 - 209 71277752 - CPS_3843 - DNA-binding protein 3724 42.05 +1 4011509..4012804 + 431 71277781 glyA3 CPS_3844 - serine hydroxymethyltransferase 3725 40.05 0 4012856..4013242 + 128 71279650 gcvH2 CPS_3845 - glycine cleavage system H protein 3726 41.69 +1 4013294..4016164 + 956 71281560 gcvP2 CPS_3846 - glycine dehydrogenase 3727 37.46 0 4016256..4017320 + 354 71281946 - CPS_3847 - porin 3728 37.76 0 4017528..4018001 - 157 71281417 - CPS_3848 - peptidyl-prolyl cis-trans isomerase, FKBP-type 3729 35.94 0 4018216..4018560 + 114 71280586 - CPS_3849 - putative lipoprotein 3730 37.16 0 4018642..4019634 - 330 71279763 - CPS_3850 - hypothetical protein 3731 38.68 0 4019740..4020450 - 236 71281517 - CPS_3851 - hypothetical protein 3732 38.07 0 4020443..4021012 - 189 71278823 - CPS_3852 - sigma-70 family RNA polymerase sigma factor 3733 41.25 0 4021308..4022318 - 336 71280739 - CPS_3853 - alcohol dehydrogenase, zinc-containing 3734 38.71 0 4022748..4023974 - 408 71280354 - CPS_3854 - hypothetical protein 3735 34.34 -1 4024284..4024382 - 32 71281619 - CPS_3855 - hypothetical protein 3736 39.67 0 4024927..4025652 + 241 71278775 - CPS_3856 - hypothetical protein 3737 41.46 0 4025839..4025961 + 40 71280431 - CPS_3857 - hypothetical protein 3738 41.80 +1 4026225..4026602 - 125 71282330 - CPS_3858 - L-PSP family endoribonuclease 3739 32.35 -1 4026607..4026708 - 33 71281477 - CPS_3859 - hypothetical protein 3740 41.99 +1 4026757..4028316 - 519 71280398 - CPS_3860 - BCCT family transporter 3741 42.64 +1 4028459..4029457 - 332 71282567 - CPS_3861 - M19 family peptidase 3742 42.76 +1 4029472..4030914 - 480 71281462 - CPS_3862 - aldehyde dehydrogenase family protein 3743 39.94 0 4031005..4031928 + 307 71278659 - CPS_3863 - LysR family transcriptional regulator 3744 38.08 0 4032241..4033947 + 568 71278287 - CPS_3864 - methyl-accepting chemotaxis protein 3745 41.18 0 4034003..4034104 - 33 71280380 - CPS_3865 - hypothetical protein 3746 36.61 0 4034228..4034410 - 60 71281099 - CPS_3866 - hypothetical protein 3747 43.33 +1 4034936..4036645 + 569 71278911 - CPS_3867 - hypothetical protein 3748 39.67 0 4036667..4037392 + 241 71282172 - CPS_3868 - hypothetical protein 3749 43.69 +1 4037731..4038522 + 263 71282023 - CPS_3869 - formate dehydrogenase family accessory protein FdhD 3750 42.16 +1 4038536..4040845 + 769 71281164 - CPS_3870 - oxidoreductase, alpha/molybdopterin subunit 3751 38.53 0 4041230..4043596 - 788 71278361 - CPS_3871 - putative sensor histidine kinase 3752 41.18 0 4043798..4045786 + 662 71282581 tkt CPS_3872 - transketolase 3753 40.10 0 4045898..4046917 + 339 71278354 epd CPS_3873 - D-erythrose 4-phosphate dehydrogenase 3754 40.48 0 4046986..4048161 + 391 71280637 pgk CPS_3874 - phosphoglycerate kinase 3755 26.13 -2 4048204..4048314 + 36 71281918 - CPS_3875 - hypothetical protein 3756 40.75 0 4048601..4049665 + 354 71282271 fba CPS_3876 - fructose-1,6-bisphosphate aldolase 3757 36.27 0 4049805..4050689 + 294 71278311 - CPS_3877 - hypothetical protein 3758 36.27 0 4050719..4051297 - 192 71278884 - CPS_3878 - hypothetical protein 3759 34.75 0 4051481..4052188 - 235 71282592 - CPS_3879 - putative ABC transporter, periplasmic substrate-binding protein 3760 18.75 -2 4052208..4052303 - 31 71278417 - CPS_3880 - hypothetical protein 3761 43.59 +1 4052480..4052596 - 38 71277804 - CPS_3881 - hypothetical protein 3762 32.60 -1 4052726..4055176 + 816 71279842 - CPS_3882 - leucine-rich repeat-containing protein 3763 40.36 0 4055352..4057031 + 559 71279997 - CPS_3883 - putative ABC transporter ATP-binding protein 3764 32.23 -1 4057228..4057590 + 120 71278427 - CPS_3884 - hypothetical protein 3765 38.35 0 4057681..4058178 + 165 71277769 - CPS_3885 - ACT domain-containing protein 3766 40.53 0 4058349..4060292 - 647 71279869 - CPS_3886 - ATP-dependent helicase 3767 39.08 0 4060348..4060695 - 115 71279147 - CPS_3887 - hypothetical protein 3768 39.58 0 4061049..4061096 + 15 71280161 hisL CPS_3888 - His operon leader peptide 3769 40.31 0 4061309..4062211 + 300 71279395 hisG CPS_3889 - ATP phosphoribosyltransferase 3770 41.84 +1 4062401..4063705 + 434 71281089 hisD2 CPS_3890 - histidinol dehydrogenase 3771 38.30 0 4063762..4064868 + 368 71280715 hisC CPS_3891 - histidinol-phosphate aminotransferase 3772 39.41 0 4064924..4066009 + 361 71282446 hisB CPS_3892 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0