version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3608 41.09 0 3882213..3883205 - 330 71280425 bglA CPS_3723 - beta-glucanase 3609 22.92 -2 3883656..3883751 - 31 71282278 - CPS_3724 - hypothetical protein 3610 46.64 +2 3884551..3886368 + 605 71281446 - CPS_3725 - glycosy hydrolase family protein 3611 44.91 +1 3886445..3887308 + 287 71278419 - CPS_3726 - glycosy hydrolase family protein 3612 43.69 +1 3887551..3888390 + 279 71278190 - CPS_3727 - short chain dehydrogenase/reductase family oxidoreductase 3613 34.97 0 3888505..3888933 + 142 71280153 - CPS_3728 - glyoxalase family protein 3614 36.15 0 3889051..3889830 + 259 71279407 - CPS_3729 - polysaccharide deacetylase family protein 3615 32.61 -1 3890067..3890204 + 45 71282359 - CPS_3730 - hypothetical protein 3616 39.81 0 3890220..3890327 - 35 71281787 - CPS_3731 - hypothetical protein 3617 40.32 0 3890497..3891828 - 443 71281357 - CPS_3732 - sugar:cation symporter family protein 3618 33.97 -1 3891889..3892044 + 51 71280527 - CPS_3733 - hypothetical protein 3619 35.28 0 3892101..3893591 - 496 71279868 - CPS_3734 - putative tryptophan halogenase 3620 37.20 0 3893605..3894612 - 335 71279171 - CPS_3735 - PASS1 domain-containing protein 3621 31.01 -2 3894622..3895353 - 243 71277816 - CPS_3736 - hypothetical protein 3622 39.70 0 3895482..3898466 - 994 71278388 - CPS_3737 - TonB-dependent receptor 3623 38.03 0 3899199..3900602 - 467 71280702 - CPS_3738 - hypothetical protein 3624 39.45 0 3901095..3903317 + 740 71282603 bglX CPS_3739 - periplasmic beta-glucosidase 3625 38.11 0 3903342..3905141 + 599 71279892 - CPS_3740 - putative endoglucanase A 3626 30.90 -2 3905308..3905595 + 95 71277972 - CPS_3741 - hypothetical protein 3627 33.33 -1 3905626..3905736 + 36 71280541 - CPS_3742 - hypothetical protein 3628 42.20 +1 3905897..3906223 - 108 71281215 - CPS_3743 - hypothetical protein 3629 39.20 0 3906377..3908524 - 715 71281938 dnaX CPS_3744 - DNA polymerase III, gamma/tau subunit 3630 39.74 0 3908554..3909099 - 181 71282423 apt CPS_3745 - adenine phosphoribosyltransferase 3631 33.91 -1 3909079..3909252 + 57 71277764 - CPS_3746 - hypothetical protein 3632 33.59 -1 3909216..3909611 - 131 71278862 - CPS_3747 - response regulator 3633 36.04 0 3909747..3909857 - 36 71277871 - CPS_3748 - hypothetical protein 3634 35.53 0 3909766..3910449 - 227 71278386 - CPS_3749 - hypothetical protein 3635 36.67 0 3910734..3911123 + 129 71280152 - CPS_3750 - hypothetical protein 3636 35.19 0 3911282..3912577 - 431 71280828 - CPS_3751 - TPR domain-containing protein 3637 44.12 +1 3912583..3913194 - 203 71280326 - CPS_3752 - putative TonB protein 3638 38.56 0 3913198..3913599 - 133 71281627 exbD2 CPS_3753 - biopolymer transport exbD protein 3639 43.43 +1 3913612..3914136 - 174 71280088 exbB2 CPS_3754 - biopolymer transport exbB protein 3640 36.74 0 3914136..3915485 - 449 71279554 - CPS_3755 - MotA/TolQ/ExbB proton channel family protein 3641 40.26 0 3915485..3916264 - 259 71280849 - CPS_3756 - hypothetical protein 3642 40.36 0 3916811..3919585 - 924 71280336 - CPS_3757 - TonB-dependent receptor 3643 36.11 0 3920249..3920932 + 227 71281792 - CPS_3758 - putative primosomal replication protein N'' 3644 31.11 -1 3921041..3921310 + 89 71282350 - CPS_3759 - hypothetical protein 3645 39.26 0 3921786..3924689 - 967 71280407 - CPS_3760 - TonB-dependent receptor 3646 36.88 0 3925905..3926891 - 328 71279651 - CPS_3761 - hypothetical protein 3647 38.34 0 3927032..3927670 - 212 71278129 maiA CPS_3762 - maleylacetoacetate isomerase 3648 40.20 0 3927831..3928820 - 329 71278661 - CPS_3763 - fumarylacetoacetate hydrolase family protein 3649 40.04 0 3929016..3930566 - 516 71282402 tyrR CPS_3764 - sigma-54 dependent transcriptional regulator TyrR 3650 37.57 0 3930744..3931097 - 117 71278566 phhB CPS_3765 - pterin-4-alpha-carbinolamine dehydratase 3651 37.56 0 3931455..3932258 - 267 71279120 phhA CPS_3766 - phenylalanine 4-monooxygenase 3652 28.21 -2 3932260..3932376 - 38 71279058 - CPS_3767 - hypothetical protein 3653 37.77 0 3932493..3933620 - 375 71279595 - CPS_3768 - hypothetical protein 3654 38.21 0 3933617..3935092 - 491 71281403 - CPS_3769 - hypothetical protein 3655 41.50 0 3935537..3935989 - 150 71281935 pspC CPS_3770 - phage shock protein C 3656 39.47 0 3935986..3936213 - 75 71278133 pspB CPS_3771 - phage shock protein B 3657 36.94 0 3936276..3936941 - 221 71278522 pspA1 CPS_3772 - phage shock protein A 3658 27.60 -2 3936959..3937150 + 63 71279044 - CPS_3773 - hypothetical protein 3659 38.78 0 3937178..3938296 + 372 71279704 pspF CPS_3774 - sigma-54 depedent transcriptional activator PspF 3660 37.58 0 3938286..3939956 + 556 71280649 sapA CPS_3775 - peptide ABC transporter, periplasmic peptide-binding protein 3661 38.10 0 3939958..3940986 + 342 71280876 sapB CPS_3776 - peptide ABC transporter, permease protein 3662 40.31 0 3941024..3941869 + 281 71280339 sapC CPS_3777 - peptide ABC transporter, permease protein 3663 41.12 0 3941964..3942977 + 337 71280123 sapD CPS_3778 - peptide ABC transporter, ATP-binding protein 3664 38.35 0 3942979..3943755 + 258 71278730 sapF CPS_3779 - peptide ABC transporter, ATP-binding protein 3665 37.82 0 3943939..3945855 - 638 71278179 ppiD CPS_3780 - peptidyl-prolyl cis-trans isomerase D 3666 42.86 +1 3946071..3946343 - 90 71281140 hupB3 CPS_3781 - HU family DNA-binding protein 3667 33.33 -1 3946559..3946720 + 53 71280560 - CPS_3782 - hypothetical protein 3668 39.00 0 3946638..3948986 - 782 71280534 lon CPS_3783 - ATP-dependent protease La 3669 38.35 0 3949230..3950504 - 424 71281243 clpX CPS_3784 - ATP-dependent protease ATP-binding subunit 3670 36.80 0 3950580..3951242 - 220 71281884 clpP CPS_3785 - ATP-dependent Clp protease, proteolytic subunit ClpP 3671 37.16 0 3951354..3952661 - 435 71277800 tig CPS_3786 - trigger factor 3672 39.30 0 3953842..3954696 + 284 71278486 folD2 CPS_3791 - FolD bifunctional protein 3673 39.93 0 3954815..3956224 - 469 71280239 cysS CPS_3792 - cysteinyl-tRNA synthetase 3674 37.60 0 3956390..3956881 + 163 71280918 ppiB CPS_3793 - peptidyl-prolyl cis-trans isomerase B 3675 38.15 0 3956897..3957643 + 248 71281565 lpxH CPS_3794 - UDP-2,3-diacylglucosamine hydrolase 3676 37.19 0 3957742..3958518 - 258 71282063 miaE CPS_3795 - tRNA-(MS[2]IO[6]A)-hydroxylase 3677 36.80 0 3958725..3958955 + 76 71278863 - CPS_3796 - hypothetical protein 3678 39.67 0 3959172..3959771 + 199 71278423 - CPS_3797 - hypothetical protein 3679 38.60 0 3959910..3961427 - 505 71281500 purF CPS_3798 - amidophosphoribosyltransferase 3680 38.10 0 3961598..3962080 - 160 71282382 cvpA CPS_3799 - colicin V production protein 3681 37.40 0 3962171..3962785 - 204 71280410 dedD CPS_3800 - dedD protein 3682 37.44 0 3962813..3964126 - 437 71281271 folC CPS_3801 - folC bifunctional protein 3683 39.74 0 3964186..3965043 - 285 71279494 accD CPS_3802 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 3684 39.62 0 3965207..3965986 - 259 71280165 truA CPS_3803 - tRNA pseudouridine synthase A 3685 39.01 0 3966344..3969832 - 1162 71279596 - CPS_3804 - hypothetical protein 3686 37.45 0 3970216..3971235 - 339 71279604 asd CPS_3805 - aspartate-semialdehyde dehydrogenase 3687 38.66 0 3971294..3972475 - 393 71279093 pdxB CPS_3806 - erythronate-4-phosphate dehydrogenase 3688 40.51 0 3972671..3973882 - 403 71281360 fabB CPS_3807 - 3-oxoacyl-(acyl-carrier-protein) synthase I 3689 38.07 0 3974140..3976188 + 682 71280536 - CPS_3808 - hypothetical protein 3690 35.50 0 3976348..3977178 + 276 71282224 - CPS_3809 - hypothetical protein 3691 34.34 -1 3977239..3977535 - 98 71278111 - CPS_3810 - hypothetical protein 3692 40.29 0 3977735..3978898 - 387 71280183 - CPS_3811 - putative inorganic polyphosphate/ATP-NAD kinase 3693 38.07 0 3978885..3979454 - 189 71279474 - CPS_3812 - hypothetical protein 3694 36.64 0 3979700..3980032 - 110 71280847 - CPS_3813 - putative monovalent cation/H+ antiporter subunit G 3695 37.04 0 3980043..3980312 - 89 71279289 - CPS_3814 - putative monovalent cation/H+ antiporter subunit F 3696 40.41 0 3980306..3980842 - 178 71280419 - CPS_3815 - putative monovalent cation/H+ antiporter subunit E 3697 41.96 +1 3980842..3982359 - 505 71281109 - CPS_3816 - putative monovalent cation/H+ antiporter subunit D 3698 38.44 0 3982356..3982727 - 123 71278728 - CPS_3817 - putative monovalent cation/H+ antiporter subunit C 3699 39.99 0 3982727..3985519 - 930 71278639 - CPS_3818 - putative monovalent cation/H+ antiporter subunit A 3700 35.68 0 3985801..3986268 + 155 71277905 - CPS_3819 - AsnC family transcriptional regulator 3701 42.22 +1 3986369..3987505 - 378 71282171 dnaJ CPS_3820 - chaperone protein DnaJ 3702 40.17 0 3987727..3989643 - 638 71280911 dnaK2 CPS_3821 - chaperone protein DnaK 3703 34.14 -1 3989861..3990355 - 164 71279960 - CPS_3822 - putative thioredoxin 3704 38.57 0 3990524..3991153 - 209 71280635 grpE CPS_3823 - co-chaperone GrpE 3705 39.91 0 3991311..3992192 + 293 71278421 ppnK CPS_3824 - inorganic polyphosphate/ATP-NAD kinase 3706 38.49 0 3992341..3994026 + 561 71279572 recN CPS_3825 - DNA repair protein RecN 3707 36.32 0 3994220..3994654 + 144 71282587 - CPS_3826 - SmpA/OmlA family protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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