version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3251 38.28 0 3483494..3484504 - 336 71279975 - CPS_3357 - putative permease 3252 37.80 0 3484639..3485466 - 275 71280619 - CPS_3358 - ArsR family transcriptional regulator 3253 44.26 +1 3485804..3487231 - 475 71279133 - CPS_3359 - aldehyde dehydrogenase family protein 3254 41.05 0 3487287..3488945 - 552 71279850 - CPS_3360 - acetolactate synthase 3255 38.38 0 3489282..3489380 - 32 71282293 - CPS_3361 - hypothetical protein 3256 40.46 0 3489536..3490054 - 172 71277890 - CPS_3362 - putative lipoprotein 3257 41.20 0 3490065..3492173 - 702 71281348 - CPS_3363 - hypothetical protein 3258 36.93 0 3492433..3493266 + 277 71281897 - CPS_3364 - hypothetical protein 3259 32.52 -1 3493261..3493383 - 40 71282176 - CPS_3365 - hypothetical protein 3260 40.24 0 3493444..3493863 - 139 71280437 - CPS_3366 - hypothetical protein 3261 37.42 0 3494151..3495521 + 456 71281050 msrAB CPS_3367 - peptide methionine sulfoxide reductase MsrA/MsrB 3262 37.84 0 3495557..3495667 - 36 71279145 - CPS_3368 - hypothetical protein 3263 42.45 +1 3495881..3497515 - 544 71279375 - CPS_3369 - proton/peptide symporter family protein 3264 42.60 +1 3497800..3499212 + 470 71279985 - CPS_3370 - alpha-amylase 3265 39.44 0 3499285..3499710 - 141 71278285 - CPS_3371 - MaoC domain-containing protein 3266 39.62 0 3500060..3501889 + 609 71278804 - CPS_3372 - putative transporter 3267 35.33 0 3502304..3503206 + 300 71280821 - CPS_3373 - histone deacetylase family protein 3268 38.97 0 3503664..3506717 + 1017 71281314 - CPS_3374 - putative helicase 3269 43.86 +1 3507040..3508473 - 477 71279653 - CPS_3375 - ISCps6, transposase 3270 39.97 0 3509023..3510243 - 406 71277889 - CPS_3376 - putative lipoprotein 3271 41.20 0 3510366..3511865 - 499 71278538 - CPS_3377 - putative lipoprotein 3272 50.00 +2 3512399..3512518 - 39 71282223 - CPS_3378 - hypothetical protein 3273 37.87 0 3512607..3514967 + 786 71280467 - CPS_3379 - von Willebrand factor type A domain-containing protein 3274 42.11 +1 3514972..3515529 + 185 71279396 - CPS_3380 - putative sortase family protein 3275 35.28 0 3515954..3516262 + 102 71277798 - CPS_3381 - hypothetical protein 3276 32.31 -1 3516274..3516468 - 64 71278517 - CPS_3382 - hypothetical protein 3277 40.74 0 3516437..3517030 - 197 71281239 - CPS_3383 - TetR family transcriptional regulator 3278 40.05 0 3517251..3517667 + 138 71282624 - CPS_3384 - hypothetical protein 3279 38.76 0 3517586..3517714 - 42 71281930 - CPS_3385 - hypothetical protein 3280 39.61 0 3517830..3518291 + 153 71277880 - CPS_3386 - hypothetical protein 3281 39.95 0 3519136..3519543 + 135 71278564 - CPS_3388 - hypothetical protein 3282 34.26 -1 3519544..3519651 - 35 71280236 - CPS_3389 - hypothetical protein 3283 40.28 0 3519668..3520861 - 397 71282334 - CPS_3390 - aromatic amino acid aminotransferase 3284 40.09 0 3520996..3521898 - 300 71281537 - CPS_3391 - membrane protein 3285 28.21 -2 3521933..3522049 + 38 71279371 - CPS_3392 - hypothetical protein 3286 39.99 0 3522133..3523635 + 500 71281045 - CPS_3393 - putative aminotransferase 3287 38.62 0 3523632..3524387 - 251 71280506 - CPS_3394 - hypothetical protein 3288 38.64 0 3524455..3524925 - 156 71280238 - CPS_3395 - DoxD family protein 3289 36.83 0 3525019..3525333 - 104 71278810 - CPS_3396 - putative thioredoxin 3290 36.42 0 3525358..3525843 - 161 71279259 - CPS_3397 - hypothetical protein 3291 39.54 0 3525979..3526800 + 273 71277869 - CPS_3398 - AraC family transcriptional regulator 3292 39.06 0 3527240..3527623 + 127 71278384 - CPS_3399 - glyoxalase family protein 3293 40.09 0 3527842..3528522 + 226 71282000 - CPS_3400 - hypothetical protein 3294 42.57 +1 3528626..3529924 - 432 71280589 - CPS_3401 - DEAD-box ATP dependent DNA helicase 3295 37.28 0 3530089..3530493 - 134 71281135 - CPS_3402 - hypothetical protein 3296 28.26 -2 3530723..3530860 + 45 71280639 - CPS_3403 - hypothetical protein 3297 38.03 0 3530914..3534318 + 1134 71279360 - CPS_3404 - Snf2 family protein 3298 39.30 0 3534395..3535198 - 267 71282381 - CPS_3405 - hypothetical protein 3299 39.98 0 3535199..3536131 - 310 71280745 - CPS_3406 - hypothetical protein 3300 44.09 +1 3536121..3536594 - 157 71277815 - CPS_3407 - putative lipoprotein 3301 39.17 0 3537189..3538388 - 399 71279724 nhaP CPS_3408 - Na+/H+ antiporter NhaP 3302 36.41 0 3538606..3539157 - 183 71279177 - CPS_3409 - isochorismatase family protein 3303 39.96 0 3539318..3539815 - 165 71281086 - CPS_3410 - hypothetical protein 3304 40.37 0 3539952..3541202 - 416 71282487 - CPS_3411 - putative phenylacetate-coenzyme A ligase 3305 36.02 0 3541420..3542202 - 260 71281784 - CPS_3412 - putative branched chain amino acid ABC transporter, ATP-binding protein 3306 39.05 0 3542479..3543738 - 419 71281937 - CPS_3413 - putative branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein 3307 39.48 0 3544082..3545155 - 357 71281258 - CPS_3414 - putative branched-chain amino acid ABC transporter, permease protein 3308 38.93 0 3545239..3546132 - 297 71278067 - CPS_3415 - putative branched-chain amino acid ABC transporter, permease protein 3309 38.66 0 3546129..3548099 - 656 71282309 - CPS_3416 - putative branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding 3310 40.74 0 3548099..3548908 - 269 71278560 - CPS_3417 - putative branched-chain amino acid ABC transporter, ATP-binding protein 3311 40.06 0 3549112..3550167 - 351 71278035 - CPS_3418 - hypothetical protein 3312 38.40 0 3550442..3553996 + 1184 71279587 - CPS_3419 - sensory box sensor histidine kinase/response regulator 3313 37.94 0 3554199..3554849 - 216 71279078 - CPS_3420 - LuxR family DNA-binding response regulator 3314 36.71 0 3555074..3555991 - 305 71281636 - CPS_3421 - LysR family transcriptional regulator 3315 19.79 -2 3556049..3556144 + 31 71279162 - CPS_3422 - hypothetical protein 3316 40.12 0 3556153..3557655 + 500 71281878 mmsA3 CPS_3423 - methylmalonate-semialdehyde dehydrogenase 3317 41.19 0 3557828..3558718 + 296 71278004 mmsB CPS_3424 - 3-hydroxyisobutyrate dehydrogenase 3318 40.16 0 3559298..3561466 + 722 71278905 - CPS_3425 - tonB-dependent siderophore receptor 3319 41.22 0 3561591..3562262 + 223 71282250 - CPS_3426 - putative hydroxylase 3320 39.67 0 3562424..3564064 - 546 71282632 fadD2 CPS_3427 - long-chain-fatty-acid--CoA ligase 3321 39.83 0 3564333..3565748 - 471 71280577 - CPS_3428 - putative coniferyl aldehyde dehydrogenase 3322 39.09 0 3565748..3568111 - 787 71281228 - CPS_3429 - hypothetical protein 3323 40.20 0 3568116..3569309 - 397 71279156 - CPS_3430 - BNR repeat-containing protein 3324 34.60 0 3569450..3570475 - 341 71277946 - CPS_3431 - AraC family transcriptional regulator 3325 42.73 +1 3570635..3572497 + 620 71280254 - CPS_3432 - hypothetical protein 3326 39.28 0 3572528..3573889 + 453 71279380 - CPS_3433 - hypothetical protein 3327 40.25 0 3573998..3575617 + 539 71281302 - CPS_3434 - GMC family oxidoreductase 3328 36.23 0 3575633..3575908 + 91 71278727 - CPS_3435 - hypothetical protein 3329 45.66 +2 3576119..3577246 + 375 71281626 - CPS_3436 - C4-dicarboxylate transporter/malic acid transport protein 3330 34.95 0 3577333..3578136 - 267 71278437 - CPS_3437 - hypothetical protein 3331 33.74 -1 3578405..3578647 - 80 71281695 - CPS_3438 - putative lipoprotein 3332 39.37 0 3578981..3579361 + 126 71279419 - CPS_3439 - cytochrome c2 3333 37.30 0 3579596..3579721 + 41 71282419 - CPS_3440 - hypothetical protein 3334 36.60 0 3579657..3579962 + 101 71280452 - CPS_3441 - hypothetical protein 3335 39.78 0 3580032..3581132 - 366 71278017 - CPS_3442 - putative arsenical-resistance protein 3336 40.43 0 3581135..3581599 - 154 71278451 - CPS_3443 - LuxR family transcriptional regulator 3337 38.71 0 3581624..3582181 - 185 71279013 - CPS_3444 - cytochrome b561 family protein 3338 32.52 -1 3582217..3582339 - 40 71278270 - CPS_3445 - hypothetical protein 3339 40.00 0 3582600..3583004 - 134 71280755 secG CPS_3447 - preprotein translocase, SecG subunit 3340 39.69 0 3583007..3583777 - 256 71280883 tpiA CPS_3448 - triosephosphate isomerase 3341 40.81 0 3583974..3585311 - 445 71281940 glmM CPS_3449 - phosphoglucosamine mutase 3342 32.35 -1 3585320..3585421 - 33 71282585 - CPS_3450 - hypothetical protein 3343 39.72 0 3585418..3586278 - 286 71280530 folP CPS_3451 - dihydropteroate synthase 3344 41.15 0 3586434..3588416 - 660 71279193 ftsH CPS_3452 - ATP-dependent metalloprotease FtsH 3345 39.37 0 3588574..3589203 - 209 71279764 rrmJ CPS_3453 - 23S rRNA methyltransferase J 3346 33.67 -1 3589633..3589929 + 98 71278360 - CPS_3454 - hypothetical protein 3347 38.81 0 3590002..3590202 - 66 71281983 - CPS_3455 - hypothetical protein 3348 39.01 0 3590266..3591111 - 281 71282566 - CPS_3456 - SPFH domain-containing protein/band 7 family protein 3349 37.74 0 3591334..3591810 - 158 71278345 greA CPS_3457 - transcription elongation factor GreA 3350 39.93 0 3591932..3595147 - 1071 71279813 carB CPS_3458 - carbamoyl phosphate synthase large subunit 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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