version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3211 33.99 -1 3441225..3441830 - 201 71281236 - CPS_3317 - putative response regulator NasT 3212 31.45 -1 3441933..3442091 + 52 71280584 - CPS_3318 - hypothetical protein 3213 39.48 0 3442399..3443211 - 270 71282533 - CPS_3319 - enoyl-CoA hydratase/isomerase family protein 3214 39.01 0 3443356..3444306 + 316 71281959 - CPS_3320 - LysR family transcriptional regulator 3215 39.68 0 3444695..3445939 + 414 71281257 - CPS_3321 - ISCps4, transposase 3216 35.14 0 3446068..3446676 + 202 71280574 - CPS_3322 - hypothetical protein 3217 33.89 -1 3446697..3446876 - 59 71279272 - CPS_3323 - hypothetical protein 3218 34.18 -1 3446725..3446961 - 78 71281399 - CPS_3324 - hypothetical protein 3219 27.96 -2 3447565..3447657 - 30 71278412 - CPS_3325 - hypothetical protein 3220 36.31 0 3447742..3448749 + 335 71277772 - CPS_3326 - putative lipoprotein 3221 37.04 0 3448983..3449117 - 44 71282110 - CPS_3327 - hypothetical protein 3222 41.06 0 3449153..3450148 - 331 71281732 - CPS_3328 - putative catalase 3223 36.67 0 3450228..3450617 - 129 71282443 - CPS_3329 - hypothetical protein 3224 44.21 +1 3450668..3451090 - 140 71280679 ohr CPS_3330 - organic hydroperoxide resistance protein 3225 37.82 0 3451244..3451711 + 155 71281411 - CPS_3331 - MarR family transcriptional regulator 3226 40.15 0 3452397..3455768 + 1123 71278429 - CPS_3332 - hypothetical protein 3227 41.10 0 3455784..3456800 + 338 71282274 - CPS_3333 - hypothetical protein 3228 49.73 +2 3457409..3460360 + 983 71277763 - CPS_3335 - serine protease 3229 51.75 +2 3458551..3458778 - 75 71278717 - CPS_3334 - hypothetical protein 3230 38.60 0 3460595..3461050 - 151 71279023 - CPS_3336 - hypothetical protein 3231 32.02 -1 3461246..3463306 + 686 71279776 - CPS_3337 - putative adenylate cyclase 3232 46.46 +2 3463418..3463516 + 32 71281129 - CPS_3338 - hypothetical protein 3233 39.39 0 3463678..3464007 - 109 71280719 - CPS_3339 - hypothetical protein 3234 40.26 0 3464423..3466255 + 610 71281139 kefC CPS_3340 - glutathione-regulated potassium-efflux system protein KefC 3235 38.23 0 3466354..3466986 - 210 71280604 - CPS_3341 - TetR family transcriptional regulator 3236 39.58 0 3467047..3467814 - 255 71279800 - CPS_3342 - hypothetical protein 3237 38.57 0 3467824..3469734 - 636 71279270 - CPS_3343 - putative acylase 3238 39.48 0 3469862..3472237 - 791 71277744 - CPS_3344 - TonB-dependent receptor 3239 37.77 0 3472300..3473943 - 547 71280665 - CPS_3345 - acid-CoA ligase family protein 3240 37.66 0 3473943..3474821 - 292 71282517 - CPS_3346 - enoyl-CoA hydratase/isomerase family protein 3241 39.77 0 3474769..3476229 - 486 71279161 - CPS_3347 - putative osmoregulated proline transporter 3242 37.41 0 3476878..3477024 + 48 71279836 - CPS_3348 - hypothetical protein 3243 38.52 0 3476966..3477100 - 44 71277774 - CPS_3349 - hypothetical protein 3244 39.65 0 3477150..3478178 - 342 71278426 - CPS_3350 - metallo-beta-lactamase family protein 3245 32.54 -1 3478254..3478379 - 41 71282604 - CPS_3351 - hypothetical protein 3246 37.71 0 3478695..3479630 - 311 71280521 - CPS_3352 - membrane protein 3247 40.40 0 3479997..3480845 + 282 71281861 - CPS_3353 - methylated-DNA--protein-cysteine methyltransferase 3248 39.37 0 3480846..3482054 - 402 71282608 - CPS_3354 - hypothetical protein 3249 40.65 0 3482124..3483134 - 336 71280260 gap3 CPS_3355 - glyceraldehyde-3-phosphate dehydrogenase 3250 35.44 0 3483238..3483474 - 78 71281389 - CPS_3356 - redox-active disulfide protein 2 3251 38.28 0 3483494..3484504 - 336 71279975 - CPS_3357 - putative permease 3252 37.80 0 3484639..3485466 - 275 71280619 - CPS_3358 - ArsR family transcriptional regulator 3253 44.26 +1 3485804..3487231 - 475 71279133 - CPS_3359 - aldehyde dehydrogenase family protein 3254 41.05 0 3487287..3488945 - 552 71279850 - CPS_3360 - acetolactate synthase 3255 38.38 0 3489282..3489380 - 32 71282293 - CPS_3361 - hypothetical protein 3256 40.46 0 3489536..3490054 - 172 71277890 - CPS_3362 - putative lipoprotein 3257 41.20 0 3490065..3492173 - 702 71281348 - CPS_3363 - hypothetical protein 3258 36.93 0 3492433..3493266 + 277 71281897 - CPS_3364 - hypothetical protein 3259 32.52 -1 3493261..3493383 - 40 71282176 - CPS_3365 - hypothetical protein 3260 40.24 0 3493444..3493863 - 139 71280437 - CPS_3366 - hypothetical protein 3261 37.42 0 3494151..3495521 + 456 71281050 msrAB CPS_3367 - peptide methionine sulfoxide reductase MsrA/MsrB 3262 37.84 0 3495557..3495667 - 36 71279145 - CPS_3368 - hypothetical protein 3263 42.45 +1 3495881..3497515 - 544 71279375 - CPS_3369 - proton/peptide symporter family protein 3264 42.60 +1 3497800..3499212 + 470 71279985 - CPS_3370 - alpha-amylase 3265 39.44 0 3499285..3499710 - 141 71278285 - CPS_3371 - MaoC domain-containing protein 3266 39.62 0 3500060..3501889 + 609 71278804 - CPS_3372 - putative transporter 3267 35.33 0 3502304..3503206 + 300 71280821 - CPS_3373 - histone deacetylase family protein 3268 38.97 0 3503664..3506717 + 1017 71281314 - CPS_3374 - putative helicase 3269 43.86 +1 3507040..3508473 - 477 71279653 - CPS_3375 - ISCps6, transposase 3270 39.97 0 3509023..3510243 - 406 71277889 - CPS_3376 - putative lipoprotein 3271 41.20 0 3510366..3511865 - 499 71278538 - CPS_3377 - putative lipoprotein 3272 50.00 +2 3512399..3512518 - 39 71282223 - CPS_3378 - hypothetical protein 3273 37.87 0 3512607..3514967 + 786 71280467 - CPS_3379 - von Willebrand factor type A domain-containing protein 3274 42.11 +1 3514972..3515529 + 185 71279396 - CPS_3380 - putative sortase family protein 3275 35.28 0 3515954..3516262 + 102 71277798 - CPS_3381 - hypothetical protein 3276 32.31 -1 3516274..3516468 - 64 71278517 - CPS_3382 - hypothetical protein 3277 40.74 0 3516437..3517030 - 197 71281239 - CPS_3383 - TetR family transcriptional regulator 3278 40.05 0 3517251..3517667 + 138 71282624 - CPS_3384 - hypothetical protein 3279 38.76 0 3517586..3517714 - 42 71281930 - CPS_3385 - hypothetical protein 3280 39.61 0 3517830..3518291 + 153 71277880 - CPS_3386 - hypothetical protein 3281 39.95 0 3519136..3519543 + 135 71278564 - CPS_3388 - hypothetical protein 3282 34.26 -1 3519544..3519651 - 35 71280236 - CPS_3389 - hypothetical protein 3283 40.28 0 3519668..3520861 - 397 71282334 - CPS_3390 - aromatic amino acid aminotransferase 3284 40.09 0 3520996..3521898 - 300 71281537 - CPS_3391 - membrane protein 3285 28.21 -2 3521933..3522049 + 38 71279371 - CPS_3392 - hypothetical protein 3286 39.99 0 3522133..3523635 + 500 71281045 - CPS_3393 - putative aminotransferase 3287 38.62 0 3523632..3524387 - 251 71280506 - CPS_3394 - hypothetical protein 3288 38.64 0 3524455..3524925 - 156 71280238 - CPS_3395 - DoxD family protein 3289 36.83 0 3525019..3525333 - 104 71278810 - CPS_3396 - putative thioredoxin 3290 36.42 0 3525358..3525843 - 161 71279259 - CPS_3397 - hypothetical protein 3291 39.54 0 3525979..3526800 + 273 71277869 - CPS_3398 - AraC family transcriptional regulator 3292 39.06 0 3527240..3527623 + 127 71278384 - CPS_3399 - glyoxalase family protein 3293 40.09 0 3527842..3528522 + 226 71282000 - CPS_3400 - hypothetical protein 3294 42.57 +1 3528626..3529924 - 432 71280589 - CPS_3401 - DEAD-box ATP dependent DNA helicase 3295 37.28 0 3530089..3530493 - 134 71281135 - CPS_3402 - hypothetical protein 3296 28.26 -2 3530723..3530860 + 45 71280639 - CPS_3403 - hypothetical protein 3297 38.03 0 3530914..3534318 + 1134 71279360 - CPS_3404 - Snf2 family protein 3298 39.30 0 3534395..3535198 - 267 71282381 - CPS_3405 - hypothetical protein 3299 39.98 0 3535199..3536131 - 310 71280745 - CPS_3406 - hypothetical protein 3300 44.09 +1 3536121..3536594 - 157 71277815 - CPS_3407 - putative lipoprotein 3301 39.17 0 3537189..3538388 - 399 71279724 nhaP CPS_3408 - Na+/H+ antiporter NhaP 3302 36.41 0 3538606..3539157 - 183 71279177 - CPS_3409 - isochorismatase family protein 3303 39.96 0 3539318..3539815 - 165 71281086 - CPS_3410 - hypothetical protein 3304 40.37 0 3539952..3541202 - 416 71282487 - CPS_3411 - putative phenylacetate-coenzyme A ligase 3305 36.02 0 3541420..3542202 - 260 71281784 - CPS_3412 - putative branched chain amino acid ABC transporter, ATP-binding protein 3306 39.05 0 3542479..3543738 - 419 71281937 - CPS_3413 - putative branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein 3307 39.48 0 3544082..3545155 - 357 71281258 - CPS_3414 - putative branched-chain amino acid ABC transporter, permease protein 3308 38.93 0 3545239..3546132 - 297 71278067 - CPS_3415 - putative branched-chain amino acid ABC transporter, permease protein 3309 38.66 0 3546129..3548099 - 656 71282309 - CPS_3416 - putative branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding 3310 40.74 0 3548099..3548908 - 269 71278560 - CPS_3417 - putative branched-chain amino acid ABC transporter, ATP-binding protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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