version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3065 43.67 +1 3278764..3279885 - 373 71279712 aroC CPS_3150 - chorismate synthase 3066 38.73 0 3280026..3280970 - 314 71280281 - CPS_3151 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3067 31.18 -1 3280939..3281031 + 30 71280501 - CPS_3152 - hypothetical protein 3068 38.51 0 3281119..3281814 + 231 71278197 - CPS_3153 - hypothetical protein 3069 43.31 +1 3281825..3282325 - 166 71281545 sixA CPS_3154 - phosphohistidine phosphatase SixA 3070 37.35 0 3282599..3285409 + 936 71279434 - CPS_3155 - zinc metallopeptidase 3071 39.56 0 3285557..3287851 - 764 161407971 fadJ CPS_3156 - multifunctional fatty acid oxidation complex subunit alpha 3072 43.12 +1 3287920..3289227 - 435 71280472 fadI CPS_3157 - 3-ketoacyl-CoA thiolase 3073 40.51 0 3289462..3289698 - 78 71280991 - CPS_3158 - hypothetical protein 3074 39.62 0 3289884..3290885 + 333 71278888 - CPS_3159 - hypothetical protein 3075 41.19 0 3290930..3291985 + 351 71282038 - CPS_3160 - hypothetical protein 3076 38.81 0 3291985..3292587 + 200 71280026 - CPS_3161 - hypothetical protein 3077 39.17 0 3293642..3295714 + 690 71282583 - CPS_3163 - TPR domain-containing protein 3078 39.12 0 3295782..3297527 + 581 71280983 - CPS_3164 - batD protein 3079 38.95 0 3297666..3298181 + 171 71279207 - CPS_3165 - RNA polymerase sigma factor 3080 38.38 0 3298174..3298887 + 237 71280632 - CPS_3166 - hypothetical protein 3081 37.32 0 3299016..3301475 - 819 71281207 - CPS_3167 - putative peptidase 3082 39.84 0 3301704..3302195 + 163 71278834 - CPS_3168 - SecC motif-containing protein 3083 37.86 0 3302215..3302832 - 205 71278471 - CPS_3169 - hypothetical protein 3084 39.24 0 3303032..3304318 - 428 71282190 - CPS_3170 - sensor histidine kinase 3085 43.39 +1 3304400..3304588 + 62 71281806 - CPS_3171 - hypothetical protein 3086 38.35 0 3304710..3305426 - 238 71279233 - CPS_3172 - DNA-binding response regulator 3087 38.54 0 3305759..3306565 + 268 71279793 xth CPS_3173 - exonuclease III 3088 35.49 0 3306578..3307411 + 277 71277877 rrmA CPS_3174 - 23S rRNA methyltransferase A 3089 37.83 0 3307436..3307969 - 177 71278395 - CPS_3175 - hypothetical protein 3090 39.87 0 3308144..3309382 + 412 71282106 ackA CPS_3176 - acetate kinase 3091 40.64 0 3309465..3311585 + 706 71282469 pta CPS_3177 - phosphate acetyltransferase 3092 35.90 0 3312157..3312507 + 116 71277796 - CPS_3178 - ArsC family protein 3093 40.25 0 3312564..3313763 + 399 71278622 dapE CPS_3179 - succinyl-diaminopimelate desuccinylase 3094 38.59 0 3313784..3314506 + 240 71279677 - CPS_3180 - D-alanyl-D-alanine carboxypeptidase family protein 3095 31.75 -1 3314566..3314754 + 62 71280646 - CPS_3181 - hypothetical protein 3096 37.61 0 3314892..3316061 - 389 71281685 - CPS_3182 - putative lipoprotein 3097 30.11 -2 3316082..3316174 - 30 71282319 - CPS_3183 - hypothetical protein 3098 31.11 -1 3316111..3316245 - 44 71282379 - CPS_3184 - hypothetical protein 3099 35.97 0 3316289..3316819 + 176 71280810 gcvR CPS_3185 - glycine cleavage system transcriptional repressor 3100 35.01 0 3317012..3317488 + 158 71280359 bcp CPS_3186 - thioredoxin-dependent thiol peroxidase 3101 37.43 0 3317673..3318746 - 357 71281155 - CPS_3187 - putative permease 3102 29.58 -2 3318760..3318999 - 79 71281953 - CPS_3188 - hypothetical protein 3103 34.48 -1 3319306..3319914 + 202 71282249 - CPS_3189 - hypothetical protein 3104 38.02 0 3319983..3321434 + 483 71278166 - CPS_3190 - hypothetical protein 3105 35.29 0 3321514..3321870 + 118 71279048 arsC CPS_3191 - arsenate reductase 3106 34.34 -1 3321915..3322310 + 131 71279585 - CPS_3192 - hypothetical protein 3107 39.25 0 3322616..3324559 + 647 71281210 - CPS_3193 - putative lipoprotein 3108 36.86 0 3324669..3325376 - 235 71281837 - CPS_3194 - hypothetical protein 3109 37.03 0 3325373..3326806 - 477 71278596 - CPS_3195 - hypothetical protein 3110 39.48 0 3327017..3328057 + 346 71279275 purM CPS_3196 - phosphoribosylformylglycinamidine cyclo-ligase 3111 39.88 0 3328176..3328817 + 213 71279980 purN CPS_3197 - phosphoribosylglycinamide formyltransferase 3112 35.70 0 3329030..3329788 + 252 71280453 - CPS_3198 - hypothetical protein 3113 43.33 +1 3330375..3330494 - 39 71281542 - CPS_3199 - hypothetical protein 3114 27.64 -2 3330484..3330606 - 40 71281585 - CPS_3200 - hypothetical protein 3115 34.96 0 3330692..3331183 + 163 71282078 - CPS_3201 - hypothetical protein 3116 39.06 0 3331323..3333224 - 633 71278938 - CPS_3202 - putative lipoprotein 3117 40.28 0 3333540..3335798 + 752 71282007 - CPS_3203 - radical SAM domain-containing protein 3118 38.98 0 3335981..3337573 + 530 71280232 - CPS_3204 - ABC transporter, ATP-binding protein 3119 39.41 0 3337664..3338551 + 295 71278372 - CPS_3205 - hypothetical protein 3120 40.89 0 3338717..3340384 - 555 71279779 - CPS_3206 - glutamate synthase domain-containing protein 3121 37.67 0 3340815..3342104 + 429 71279349 - CPS_3207 - hypothetical protein 3122 36.36 0 3342659..3342757 + 32 71280352 - CPS_3208 - hypothetical protein 3123 31.30 -1 3342747..3343238 - 163 71280712 - CPS_3209 - hypothetical protein 3124 34.91 0 3343260..3343955 - 231 71281618 - CPS_3210 - C39 family peptidase 3125 35.00 0 3343975..3344334 - 119 71278468 - CPS_3211 - hypothetical protein 3126 33.33 -1 3344407..3344511 + 34 71281068 - CPS_3212 - hypothetical protein 3127 37.89 0 3345165..3346085 + 306 71279797 - CPS_3213 - hypothetical protein 3128 32.22 -1 3346698..3347507 + 269 71279241 - CPS_3214 - putative transcriptional regulator 3129 37.05 0 3347779..3349125 - 448 71279863 - CPS_3215 - putative ATP-dependent RNA helicase SrmB 3130 39.56 0 3349180..3350592 - 470 71279128 gltX CPS_3216 - glutamyl-tRNA synthetase 3131 37.04 0 3350608..3350715 + 35 71277865 - CPS_3217 - hypothetical protein 3132 41.12 0 3351989..3353323 - 444 71282511 - CPS_3224 - hypothetical protein 3133 38.96 0 3353344..3354036 - 230 71278398 - CPS_3225 - putative lipoprotein 3134 41.48 0 3354150..3356345 - 731 71280564 - CPS_3226 - hypothetical protein 3135 36.90 0 3356480..3356899 + 139 71281151 - CPS_3227 - hypothetical protein 3136 33.55 -1 3356925..3357395 + 156 71280624 - CPS_3228 - hypothetical protein 3137 37.68 0 3357481..3357963 - 160 71279761 - CPS_3229 - acetyltransferase 3138 39.36 0 3358621..3360330 + 569 71279026 proS CPS_3230 - prolyl-tRNA synthetase 3139 32.26 -1 3360539..3360631 + 30 71281531 - CPS_3231 - hypothetical protein 3140 36.33 0 3360743..3361978 + 411 71281034 - CPS_3232 - aminotransferase AlaT 3141 33.50 -1 3362001..3362594 + 197 71280485 - CPS_3233 - hypothetical protein 3142 35.23 0 3362902..3363480 - 192 71279417 - CPS_3234 - putative lipoprotein 3143 40.48 0 3363778..3363861 + 27 71281762 - CPS_3235 - ilvIH operon leader peptide 3144 40.28 0 3364002..3365729 + 575 71278872 ilvI CPS_3236 - acetolactate synthase III, large subunit, biosynthetic type 3145 36.95 0 3365729..3366226 + 165 71278331 ilvH CPS_3237 - acetolactate synthase 3 regulatory subunit 3146 37.06 0 3366321..3367151 - 276 71282095 - CPS_3238 - hypothetical protein 3147 38.14 0 3367231..3369375 - 714 71281554 - CPS_3239 - Slt family transglycosylase 3148 38.90 0 3369541..3371211 - 556 71281009 glnS CPS_3240 - glutaminyl-tRNA synthetase 3149 35.98 0 3371476..3372762 - 428 71281369 - CPS_3241 - response regulator 3150 33.58 -1 3372958..3373368 - 136 71278220 - CPS_3242 - hypothetical protein 3151 36.00 0 3373461..3374474 - 337 71277831 - CPS_3243 - glycosyl transferase family protein 3152 35.23 0 3374488..3375753 - 421 71279610 - CPS_3244 - polysaccharide biosynthesis protein 3153 37.36 0 3375927..3377393 - 488 71278402 - CPS_3245 - sigma 54-dependent DNA-binding response regulator 3154 37.57 0 3377795..3378526 + 243 71277823 - CPS_3246 - hypothetical protein 3155 35.19 0 3378712..3380001 + 429 71279884 - CPS_3247 - WecB/TagA/CpsF family glycosyl transferase 3156 34.21 -1 3380001..3380681 + 226 71279334 - CPS_3248 - putative polysaccharide biosynthesis glycosyltransferase 3157 39.83 0 3380983..3382260 + 425 71281208 - CPS_3249 - polysaccharide biosynthesis/export protein 3158 37.86 0 3382268..3383680 + 470 71280009 - CPS_3250 - hypothetical protein 3159 31.16 -1 3383691..3383828 - 45 71278994 - CPS_3251 - hypothetical protein 3160 38.38 0 3383945..3385213 + 422 71278432 - CPS_3252 - capsular polysaccharide biosynthesis protein,-like protein 3161 35.60 0 3385206..3386351 + 381 71277908 - CPS_3253 - putative polysaccharide pyruvyl transferase 3162 36.61 0 3386311..3387255 + 314 71282279 - CPS_3254 - glycosyl transferase, group 2 family protein 3163 29.41 -2 3387307..3388401 + 364 71282426 - CPS_3255 - acyltransferase family protein 3164 34.11 -1 3388485..3388613 + 42 71281804 - CPS_3256 - hypothetical protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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