version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2980 39.90 0 3198108..3199370 - 420 71278720 - CPS_3064 - putative lipoprotein 2981 33.89 -1 3199505..3200218 + 237 71279557 - CPS_3065 - DNA-binding response regulator 2982 34.63 0 3200211..3201596 + 461 71280124 - CPS_3066 - sensor histidine kinase 2983 25.81 -2 3201589..3201681 - 30 71280328 - CPS_3067 - hypothetical protein 2984 37.38 0 3202018..3202560 - 180 71280835 - CPS_3068 - putative peptide methionine sulfoxide reductase MsrA 2985 41.12 0 3202596..3203096 - 166 71281656 - CPS_3069 - methionine sulfoxide reductase A 2986 39.74 0 3203093..3203545 - 150 71282193 msrB2 CPS_3070 - methionine sulfoxide reductase B 2987 35.07 0 3203599..3204117 - 172 71279205 - CPS_3071 - hypothetical protein 2988 40.50 0 3204179..3204736 - 185 71279785 - CPS_3072 - hypothetical protein 2989 33.33 -1 3204684..3204821 + 45 71278265 - CPS_3073 - hypothetical protein 2990 39.05 0 3205111..3205722 - 203 71278913 - CPS_3074 - cytochrome p460 2991 38.16 0 3205791..3206744 + 317 71282126 - CPS_3075 - AraC family transcriptional regulator 2992 34.81 0 3206814..3208031 + 405 71281114 - CPS_3076 - PqiA family integral membrane protein 2993 35.92 0 3208021..3209763 + 580 71281474 - CPS_3077 - putative paraquat-inducible protein B 2994 34.05 -1 3209826..3210386 + 186 71279412 - CPS_3078 - putative lipoprotein 2995 37.63 0 3210566..3210658 + 30 71280418 - CPS_3079 - hypothetical protein 2996 37.54 0 3210763..3211452 - 229 71280066 - CPS_3080 - hypothetical protein 2997 34.34 -1 3212057..3212752 - 231 71280879 - CPS_3081 - hypothetical protein 2998 34.00 -1 3212973..3213122 + 49 71279578 - CPS_3082 - hypothetical protein 2999 35.56 0 3213159..3213920 - 253 71279042 - CPS_3083 - ABC transporter permease 3000 36.46 0 3213917..3214843 - 308 71280806 - CPS_3084 - ABC transporter, ATP-binding protein 3001 39.76 0 3215291..3217375 - 694 71279998 - CPS_3085 - amidohydrolase family protein 3002 34.94 0 3217779..3218648 - 289 71281856 - CPS_3086 - LysR family transcriptional regulator 3003 32.49 -1 3218751..3219344 + 197 71281017 - CPS_3087 - amino acid transporter LysE 3004 36.61 0 3219724..3219906 + 60 71278016 - CPS_3088 - hypothetical protein 3005 37.06 0 3220072..3222648 - 858 71282087 - CPS_3089 - sensory box protein 3006 39.96 0 3222881..3223348 + 155 71280495 - CPS_3090 - ybaK/ebsC protein 3007 39.60 0 3223489..3225147 - 552 71279635 - CPS_3091 - M23B family peptidase 3008 35.49 0 3225381..3225704 + 107 71278868 - CPS_3092 - hypothetical protein 3009 34.80 0 3225787..3225990 + 67 71282017 - CPS_3093 - hypothetical protein 3010 44.76 +1 3226098..3226517 + 139 71282389 - CPS_3094 - thioesterase family protein 3011 39.83 0 3226832..3227308 + 158 71280626 - CPS_3095 - hypothetical protein 3012 38.50 0 3227758..3228396 + 212 71280388 - CPS_3096 - thiopurine S-methyltransferase family protein 3013 35.56 0 3228461..3229000 + 179 71282189 - CPS_3097 - DinB family protein 3014 39.10 0 3229061..3229372 - 103 71280582 - CPS_3098 - hypothetical protein 3015 43.84 +1 3229398..3230996 - 532 71281382 pfaD CPS_3099 - polyunsaturated fatty acid synthase PfaD 3016 48.48 +2 3231247..3231345 - 32 71279340 - CPS_3100 - hypothetical protein 3017 36.11 0 3231435..3231722 - 95 71279170 - CPS_3101 - endo/excinuclease amino terminal domain-containing protein 3018 41.08 0 3231913..3237963 - 2016 71278985 pfaC CPS_3102 - polyunsaturated fatty acid synthase PfaC 3019 40.10 0 3238255..3240957 - 900 71279011 pfaB CPS_3103 - polyunsaturated fatty acid synthase PfaB 3020 41.94 +1 3240957..3249272 - 2771 71277928 pfaA CPS_3104 - polyunsaturated fatty acid synthase PfaA 3021 41.47 0 3249336..3250208 - 290 71282482 - CPS_3105 - hypothetical protein 3022 38.28 0 3250526..3251374 + 282 71282200 - CPS_3106 - 4-phosphopantetheinyl transferase 3023 38.44 0 3251608..3252507 - 299 71280460 - CPS_3107 - LysR family transcriptional regulator 3024 38.85 0 3252615..3253448 + 277 71281146 - CPS_3108 - hypothetical protein 3025 39.17 0 3253480..3253599 + 39 71280093 - CPS_3109 - hypothetical protein 3026 42.76 +1 3253643..3254767 + 374 71280065 - CPS_3110 - oxidoreductase, FAD/FMN-binding 3027 41.02 0 3254858..3256015 + 385 71280814 - CPS_3111 - alcohol dehydrogenase, iron-containing 3028 34.39 -1 3256659..3257132 + 157 71280092 - CPS_3113 - hypothetical protein 3029 33.73 -1 3257254..3257760 + 168 71279254 - CPS_3114 - acetyltransferase 3030 37.23 0 3257884..3258627 + 247 71278374 - CPS_3115 - Ser/Thr protein phosphatase family protein 3031 35.10 0 3258755..3259546 + 263 71279887 - CPS_3116 - PhzF family phenazine biosynthesis protein 3032 33.13 -1 3259737..3260219 + 160 71279172 - CPS_3117 - hypothetical protein 3033 34.05 -1 3260302..3260580 + 92 71278188 - CPS_3118 - putative lipoprotein 3034 39.16 0 3260710..3261018 + 102 71277799 - CPS_3119 - putative lipoprotein 3035 30.62 -2 3261008..3261412 + 134 71282430 - CPS_3120 - hypothetical protein 3036 37.33 0 3261491..3261865 + 124 71280888 - CPS_3121 - ISCps9, transposase orfA 3037 40.32 0 3261796..3262683 + 295 71280233 - CPS_3122 - ISCps9, transposase orfB 3038 30.77 -2 3262907..3263023 - 38 71281613 - CPS_3123 - hypothetical protein 3039 29.33 -2 3263403..3263627 + 74 71282400 - CPS_3124 - hypothetical protein 3040 31.18 -1 3263758..3264129 + 123 71281622 - CPS_3125 - putative lipoprotein 3041 28.33 -2 3264241..3264540 + 99 71278879 - CPS_3126 - hypothetical protein 3042 30.11 -2 3264594..3264872 + 92 71278048 - CPS_3127 - hypothetical protein 3043 33.04 -1 3264991..3265326 + 111 71280268 - CPS_3128 - hypothetical protein 3044 35.46 0 3265400..3265822 + 140 71282304 - CPS_3129 - acetyltransferase 3045 39.56 0 3265929..3266603 + 224 71279449 dehII CPS_3130 - haloacid dehalogenase, type II 3046 44.21 +1 3266737..3267315 + 192 71281161 - CPS_3131 - phage SPO1 DNA polymerase-related protein 3047 35.00 0 3267440..3268039 + 199 71280642 - CPS_3132 - hypothetical protein 3048 40.05 0 3268180..3269028 + 282 71281022 folD1 CPS_3133 - FolD bifunctional protein 3049 40.24 0 3269150..3269569 + 139 71281225 - CPS_3134 - hypothetical protein 3050 39.14 0 3269689..3270084 + 131 71279497 - CPS_3135 - hypothetical protein 3051 38.74 0 3270569..3270679 + 36 71281573 - CPS_3136 - hypothetical protein 3052 34.85 0 3270751..3271146 + 131 71278405 - CPS_3137 - OsmC family protein 3053 35.88 0 3271169..3271522 + 117 71280118 - CPS_3138 - MerR family transcriptional regulator 3054 36.34 0 3271607..3272005 + 132 71278164 - CPS_3139 - putative 4-carboxymuconolactone decarboxylase 3055 37.20 0 3272130..3273035 + 301 71281205 - CPS_3140 - hypothetical protein 3056 28.21 -2 3273014..3273130 + 38 71280660 - CPS_3141 - hypothetical protein 3057 37.44 0 3273120..3273776 + 218 71282556 - CPS_3142 - amino acid transporter LysE 3058 39.85 0 3273893..3274675 + 260 71281965 - CPS_3143 - PhzF family phenazine biosynthesis protein 3059 33.73 -1 3274738..3275241 + 167 71278485 - CPS_3144 - hypothetical protein 3060 33.33 -1 3275488..3275694 + 68 71279411 - CPS_3145 - hypothetical protein 3061 38.83 0 3275885..3276430 + 181 71282107 - CPS_3146 - hypothetical protein 3062 42.28 +1 3276529..3276897 + 122 71278262 - CPS_3147 - glyoxalase family protein 3063 37.81 0 3277036..3277437 - 133 71278105 - CPS_3148 - putative phage shock protein E 3064 39.22 0 3277516..3278670 - 384 71278968 - CPS_3149 - hypothetical protein 3065 43.67 +1 3278764..3279885 - 373 71279712 aroC CPS_3150 - chorismate synthase 3066 38.73 0 3280026..3280970 - 314 71280281 - CPS_3151 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3067 31.18 -1 3280939..3281031 + 30 71280501 - CPS_3152 - hypothetical protein 3068 38.51 0 3281119..3281814 + 231 71278197 - CPS_3153 - hypothetical protein 3069 43.31 +1 3281825..3282325 - 166 71281545 sixA CPS_3154 - phosphohistidine phosphatase SixA 3070 37.35 0 3282599..3285409 + 936 71279434 - CPS_3155 - zinc metallopeptidase 3071 39.56 0 3285557..3287851 - 764 161407971 fadJ CPS_3156 - multifunctional fatty acid oxidation complex subunit alpha 3072 43.12 +1 3287920..3289227 - 435 71280472 fadI CPS_3157 - 3-ketoacyl-CoA thiolase 3073 40.51 0 3289462..3289698 - 78 71280991 - CPS_3158 - hypothetical protein 3074 39.62 0 3289884..3290885 + 333 71278888 - CPS_3159 - hypothetical protein 3075 41.19 0 3290930..3291985 + 351 71282038 - CPS_3160 - hypothetical protein 3076 38.81 0 3291985..3292587 + 200 71280026 - CPS_3161 - hypothetical protein 3077 39.17 0 3293642..3295714 + 690 71282583 - CPS_3163 - TPR domain-containing protein 3078 39.12 0 3295782..3297527 + 581 71280983 - CPS_3164 - batD protein 3079 38.95 0 3297666..3298181 + 171 71279207 - CPS_3165 - RNA polymerase sigma factor 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.