version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2745 35.44 0 2946502..2947167 - 221 71278770 - CPS_2815 - hypothetical protein 2746 34.89 0 2947326..2947904 + 192 71278260 - CPS_2816 - putative RNA polymerase sigma-70 factor FecI 2747 38.68 0 2947915..2949036 + 373 71282627 - CPS_2817 - putative regulatory protein 2748 41.06 0 2949545..2952106 + 853 71280628 - CPS_2818 - TonB-dependent receptor 2749 43.55 +1 2952274..2953467 - 397 71280926 prpF CPS_2819 - AcnD-accessory protein PrpF 2750 42.00 +1 2953551..2956157 - 868 71279481 - CPS_2820 - aconitate hydratase 2751 39.82 0 2956628..2957752 - 374 71279036 - CPS_2821 - putative 2-methylcitrate synthase 2752 40.85 0 2957790..2958680 - 296 71279700 prpB CPS_2822 - 2-methylisocitrate lyase 2753 38.47 0 2958694..2959413 - 239 71277937 - CPS_2823 - GntR family transcriptional regulator 2754 38.89 0 2959899..2960438 - 179 71278618 - CPS_2824 - hypothetical protein 2755 35.66 0 2960524..2960910 - 128 71281744 - CPS_2825 - glyoxylase family protein 2756 40.88 0 2960994..2961881 - 295 71282439 - CPS_2826 - patatin-like phospholipase family protein 2757 38.33 0 2961940..2962359 - 139 71280772 - CPS_2827 - putative lipoprotein 2758 34.38 -1 2964796..2964891 + 31 71281484 - CPS_2835 - hypothetical protein 2759 40.55 0 2964909..2965823 + 304 71278231 - CPS_2836 - hypothetical protein 2760 41.21 0 2965857..2966453 - 198 71277949 dcd CPS_2837 - deoxycytidine triphosphate deaminase 2761 40.31 0 2966481..2967656 - 391 71279428 - CPS_2838 - putative mrp protein 2762 38.61 0 2967769..2969910 + 713 71281104 metG CPS_2839 - methionyl-tRNA synthetase 2763 37.35 0 2970074..2970496 + 140 71282149 - CPS_2840 - putative rcsF protein 2764 40.16 0 2970498..2971244 + 248 71282001 - CPS_2841 - hypothetical protein 2765 40.59 0 2971304..2971951 + 215 71280100 - CPS_2842 - hypothetical protein 2766 38.97 0 2972018..2972602 - 194 71278359 - CPS_2843 - putative tellurite resistance protein 2767 36.72 0 2972609..2972785 - 58 71281544 - CPS_2844 - hypothetical protein 2768 38.10 0 2973054..2973263 - 69 71280469 - CPS_2845 - hypothetical protein 2769 39.48 0 2973443..2973946 - 167 71281058 slyD1 CPS_2846 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 2770 42.11 +1 2974103..2975002 - 299 71279485 - CPS_2847 - membrane protein 2771 39.55 0 2975051..2978977 - 1308 71279169 sbcC CPS_2848 - exonuclease SbcC 2772 42.93 +1 2978974..2980494 - 506 71279760 sbcD CPS_2849 - exonuclease subunit SbcD 2773 39.63 0 2980640..2981512 - 290 71281702 - CPS_2850 - LysR family substrate binding transcriptional regulator 2774 43.74 +1 2981640..2982869 + 409 71282235 - CPS_2851 - major facilitator superfamily protein 2775 37.39 0 2982972..2983538 - 188 71278670 - CPS_2852 - hypothetical protein 2776 38.01 0 2983670..2983990 - 106 71279526 - CPS_2853 - hypothetical protein 2777 40.05 0 2983983..2984711 - 242 71280068 - CPS_2854 - putative branched-chain amino acid transport protein AzlC 2778 39.62 0 2984759..2985601 - 280 71279582 - CPS_2855 - AraC family substrate binding transcriptional regulator 2779 38.05 0 2985787..2986104 - 105 71280458 - CPS_2856 - hypothetical protein 2780 40.32 0 2986149..2987036 - 295 71282344 - CPS_2857 - ISCps9, transposase orfB 2781 37.33 0 2986967..2987341 - 124 71280638 - CPS_2858 - ISCps9, transposase orfA 2782 39.50 0 2987503..2988264 + 253 71282526 - CPS_2859 - ATP-binding protein 2783 37.63 0 2988364..2989155 - 263 71282580 - CPS_2860 - hypothetical protein 2784 34.29 -1 2989286..2989912 - 208 71281463 - CPS_2861 - hypothetical protein 2785 35.48 0 2989903..2990088 - 61 71278430 - CPS_2862 - hypothetical protein 2786 35.13 0 2990878..2991546 + 222 71277907 - CPS_2863 - putative lignin beta-etherase 2787 31.94 -1 2991787..2992074 - 95 71279829 - CPS_2864 - hypothetical protein 2788 35.48 0 2992196..2994847 - 883 71279238 - CPS_2865 - hypothetical protein 2789 34.28 -1 2995001..2995843 - 280 71281845 - CPS_2866 - hypothetical protein 2790 41.36 0 2996237..2999437 - 1066 71279090 - CPS_2867 - CzcA family heavy metal efflux protein 2791 41.87 +1 2999452..3000798 - 448 71280822 - CPS_2868 - RND family efflux transporter MFP subunit 2792 41.08 0 3000862..3002100 - 412 71281337 - CPS_2869 - putative lipoprotein 2793 38.22 0 3002387..3002734 - 115 71282417 - CPS_2870 - hypothetical protein 2794 42.15 +1 3002973..3005342 - 789 71277785 - CPS_2871 - cold-active alkaline serine protease 2795 38.79 0 3005552..3006247 + 231 71278625 - CPS_2872 - 2OG-Fe(II) oxygenase family oxidoreductase 2796 38.67 0 3006415..3007314 - 299 71281322 - CPS_2873 - hypothetical protein 2797 40.29 0 3007302..3008840 - 512 71279737 - CPS_2874 - hypothetical protein 2798 41.20 0 3008932..3010317 - 461 71278455 - CPS_2875 - Orn/DAP/Arg decarboxylase family protein 2799 42.13 +1 3010322..3012526 - 734 71281642 - CPS_2876 - hypothetical protein 2800 42.72 +1 3012513..3012821 - 102 71280202 - CPS_2877 - hypothetical protein 2801 18.75 -2 3013403..3013498 - 31 71282559 - CPS_2878 - hypothetical protein 2802 36.02 0 3013937..3015202 + 421 71280316 - CPS_2879 - GGDEF domain-containing protein 2803 38.76 0 3015248..3016444 - 398 71278673 - CPS_2880 - putative lipoprotein 2804 41.53 0 3016455..3017381 - 308 71282003 murQ CPS_2881 - N-acetylmuramic acid-6-phosphate etherase 2805 38.87 0 3017582..3018664 + 360 71279952 alr CPS_2882 - alanine racemase 2806 40.36 0 3018684..3019352 - 222 71280858 - CPS_2883 - radical SAM domain-containing protein 2807 30.50 -2 3019355..3019495 + 46 71281416 - CPS_2884 - hypothetical protein 2808 39.27 0 3019488..3020144 + 218 71282550 - CPS_2885 - exsB protein 2809 37.56 0 3020563..3020775 + 70 71282031 - CPS_2886 - hypothetical protein 2810 39.66 0 3020946..3022967 - 673 71281240 uvrB CPS_2887 - excinuclease ABC subunit B 2811 37.80 0 3022964..3024352 - 462 71282241 - CPS_2888 - MATE efflux family protein 2812 37.76 0 3025899..3028157 - 752 71279835 clpA CPS_2893 - ATP-dependent Clp protease, ATP-binding subunit ClpA 2813 36.14 0 3028178..3028498 - 106 71278979 - CPS_2894 - ATP-dependent Clp protease adaptor protein ClpS 2814 40.18 0 3028752..3028970 + 72 71278580 cspD CPS_2895 - cold shock-like protein CspD 2815 39.09 0 3029062..3030312 - 416 71277895 icd CPS_2896 - isocitrate dehydrogenase, NADP-dependent 2816 38.35 0 3030554..3032785 - 743 71281740 - CPS_2897 - isocitrate dehydrogenase, NADP-dependent 2817 39.44 0 3032968..3033573 + 201 71279927 rluE CPS_2898 - ribosomal large subunit pseudouridine synthase E 2818 36.26 0 3033563..3034075 + 170 71282247 - CPS_2899 - MutT/nudix family protein 2819 39.45 0 3034162..3035289 + 375 71281561 trmU CPS_2900 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2820 39.31 0 3035353..3035988 + 211 71280866 - CPS_2901 - hypothetical protein 2821 37.42 0 3036062..3037432 + 456 71280210 purB CPS_2902 - adenylosuccinate lyase 2822 36.41 0 3037607..3037996 - 129 71279661 - CPS_2903 - hypothetical protein 2823 40.94 0 3038244..3039281 + 345 71279443 - CPS_2904 - Glu/Leu/Phe/Val dehydrogenase 2824 37.23 0 3039376..3040479 - 367 71278189 hemH CPS_2905 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2825 41.67 +1 3040719..3041078 - 119 71280047 rplT CPS_2906 - 50S ribosomal protein L20 2826 36.27 0 3041095..3041400 - 101 71281765 rpmI CPS_2907 - ribosomal protein L35 2827 42.29 +1 3041500..3042057 - 185 71281686 infC CPS_2908 - translation initiation factor IF-3 2828 38.20 0 3042179..3044089 - 636 71282219 thrS CPS_2909 - threonyl-tRNA synthetase 2829 34.44 -1 3044476..3045201 + 241 71280857 - CPS_2910 - hypothetical protein 2830 40.09 0 3045224..3046909 - 561 71278923 - CPS_2911 - hypothetical protein 2831 41.37 0 3047058..3047393 + 111 71278991 - CPS_2912 - ferredoxin, 4Fe-4S 2832 37.68 0 3047483..3048403 + 306 71282378 - CPS_2913 - fructosamine kinase family protein 2833 39.13 0 3048545..3048751 + 68 71281014 - CPS_2914 - hypothetical protein 2834 38.48 0 3048917..3050335 + 472 71280510 norM CPS_2915 - multidrug resistance protein NorM 2835 40.46 0 3050704..3051951 + 415 71281018 - CPS_2917 - phage integrase family site specific recombinase 2836 35.52 0 3052115..3054310 - 731 71281433 - CPS_2918 - hypothetical protein 2837 35.82 0 3054316..3055563 - 415 71282573 - CPS_2919 - hypothetical protein 2838 36.57 0 3055538..3056341 - 267 71278214 - CPS_2920 - M20/M25/M40 family peptidase 2839 35.67 0 3056459..3057958 - 499 71278878 - CPS_2921 - asparagine synthase family protein 2840 37.74 0 3057958..3058638 - 226 71279286 - CPS_2922 - hypothetical protein 2841 36.33 0 3058631..3059431 - 266 71277984 - CPS_2923 - polysaccharide deacetylase family protein 2842 37.73 0 3059412..3060389 - 325 71281066 - CPS_2924 - hypothetical protein 2843 40.44 0 3060386..3060934 - 182 71279017 - CPS_2925 - hypothetical protein 2844 32.92 -1 3061081..3061803 + 240 71278041 - CPS_2926 - putative cobalamin biosynthesis protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0