version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2694 36.61 0 2878974..2879735 + 253 71281548 - CPS_2764 - arginyl-tRNA-protein transferase 2695 36.07 0 2879866..2880084 + 72 71281895 infA CPS_2765 - translation initiation factor IF-1 2696 32.80 -1 2880265..2880825 - 186 71278631 - CPS_2766 - hypothetical protein 2697 40.52 0 2880929..2883238 - 769 71277859 recD CPS_2767 - exodeoxyribonuclease V, alpha subunit 2698 38.41 0 2883240..2887100 - 1286 71279749 recB CPS_2768 - exodeoxyribonuclease V, beta subunit 2699 39.64 0 2887100..2890696 - 1198 71279256 recC CPS_2769 - exodeoxyribonuclease V, gamma subunit 2700 40.35 0 2890846..2891073 + 75 71278493 - CPS_2770 - hypothetical protein 2701 39.86 0 2891253..2893046 + 597 71277843 - CPS_2771 - AMP-binding protein 2702 33.33 -1 2893040..2893270 + 76 71279742 - CPS_2772 - hypothetical protein 2703 38.26 0 2893248..2894180 + 310 71279266 - CPS_2773 - putative lipid A biosynthesis acyltransferase 2704 35.82 0 2894168..2895940 + 590 71279629 - CPS_2774 - lipid ABC transporter, ATP-binding/permease protein MsbA 2705 37.22 0 2895948..2896307 - 119 71279431 - CPS_2775 - hypothetical protein 2706 38.90 0 2896517..2898781 - 754 71280121 - CPS_2776 - putative protease 2707 35.90 0 2898751..2899764 - 337 71280801 - CPS_2777 - hypothetical protein 2708 39.60 0 2899783..2900835 - 350 71280875 - CPS_2778 - hypothetical protein 2709 38.62 0 2900947..2902005 - 352 71282168 aroG CPS_2779 - phospho-2-dehydro-3-deoxyheptonate aldolase 2710 32.62 -1 2902561..2902842 - 93 71280416 - CPS_2780 - hypothetical protein 2711 37.90 0 2903060..2904175 + 371 71278020 - CPS_2781 - hypothetical protein 2712 40.39 0 2904250..2904972 - 240 71280954 - CPS_2782 - hypothetical protein 2713 31.81 -1 2904972..2905889 - 305 71278990 - CPS_2783 - hypothetical protein 2714 36.32 0 2905879..2906280 - 133 71277943 - CPS_2784 - hypothetical protein 2715 38.53 0 2906282..2907820 - 512 71278433 - CPS_2785 - sensor histidine kinase 2716 39.07 0 2907887..2908618 - 243 71279007 - CPS_2786 - response regulator 2717 39.98 0 2908627..2909544 - 305 71278290 - CPS_2787 - apbE family protein 2718 39.18 0 2909584..2910918 - 444 71280763 - CPS_2788 - hypothetical protein 2719 42.79 +1 2910918..2911139 - 73 71281283 - CPS_2789 - putative lipoprotein 2720 36.94 0 2911186..2911740 - 184 71281814 - CPS_2790 - putative electron transfer protein 2721 34.94 0 2912065..2912376 + 103 71280035 - CPS_2791 - hypothetical protein 2722 34.14 -1 2912756..2914000 + 414 71279344 - CPS_2792 - putative Na+/H+ antiporter NhaD 2723 36.21 0 2914264..2914959 - 231 71281879 - CPS_2793 - putative amino acid-binding protein 2724 38.50 0 2915357..2917021 + 554 71278785 asnB CPS_2794 - asparagine synthetase B 2725 39.78 0 2917126..2918799 - 557 71280280 - CPS_2795 - amidohydrolase family protein 2726 37.70 0 2919052..2919738 + 228 71282642 - CPS_2796 - cytochrome b561 family protein 2727 37.42 0 2919904..2921763 - 619 71278184 - CPS_2797 - hypothetical protein 2728 36.88 0 2921870..2922349 - 159 71279963 - CPS_2798 - hypothetical protein 2729 35.00 0 2922601..2923080 - 159 71281494 - CPS_2799 - cytochrome c' 2730 40.45 0 2923220..2924230 - 336 71281341 pyrD CPS_2800 - dihydroorotate dehydrogenase 2731 31.67 -1 2924327..2924446 + 39 71281600 - CPS_2801 - hypothetical protein 2732 37.79 0 2924365..2929230 - 1621 71282412 - CPS_2802 - NAD-glutamate dehydrogenase family protein 2733 39.07 0 2929728..2932046 - 772 71277773 - CPS_2803 - hypothetical protein 2734 38.36 0 2932107..2933141 - 344 71278627 - CPS_2804 - BNR repeat-containing protein 2735 38.77 0 2933271..2934632 - 453 71281327 - CPS_2805 - hypothetical protein 2736 40.27 0 2934660..2936750 - 696 71279730 - CPS_2806 - hypothetical protein 2737 32.87 -1 2937128..2937343 - 71 71281951 - CPS_2807 - hypothetical protein 2738 37.38 0 2937433..2940051 - 872 71279843 pepN CPS_2808 - aminopeptidase N 2739 39.22 0 2940079..2941557 - 492 71280446 nhaC2 CPS_2809 - Na+/H+ antiporter NhaC 2740 36.94 0 2941653..2943704 - 683 71278501 prc CPS_2810 - carboxy-terminal protease 2741 34.84 0 2943792..2944454 - 220 71279125 proQ CPS_2811 - putative solute/DNA competence effector 2742 38.89 0 2944566..2944853 - 95 71281591 - CPS_2812 - hypothetical protein 2743 37.95 0 2944897..2945373 - 158 71281056 - CPS_2813 - hypothetical protein 2744 35.14 0 2945490..2946317 - 275 71279908 - CPS_2814 - hypothetical protein 2745 35.44 0 2946502..2947167 - 221 71278770 - CPS_2815 - hypothetical protein 2746 34.89 0 2947326..2947904 + 192 71278260 - CPS_2816 - putative RNA polymerase sigma-70 factor FecI 2747 38.68 0 2947915..2949036 + 373 71282627 - CPS_2817 - putative regulatory protein 2748 41.06 0 2949545..2952106 + 853 71280628 - CPS_2818 - TonB-dependent receptor 2749 43.55 +1 2952274..2953467 - 397 71280926 prpF CPS_2819 - AcnD-accessory protein PrpF 2750 42.00 +1 2953551..2956157 - 868 71279481 - CPS_2820 - aconitate hydratase 2751 39.82 0 2956628..2957752 - 374 71279036 - CPS_2821 - putative 2-methylcitrate synthase 2752 40.85 0 2957790..2958680 - 296 71279700 prpB CPS_2822 - 2-methylisocitrate lyase 2753 38.47 0 2958694..2959413 - 239 71277937 - CPS_2823 - GntR family transcriptional regulator 2754 38.89 0 2959899..2960438 - 179 71278618 - CPS_2824 - hypothetical protein 2755 35.66 0 2960524..2960910 - 128 71281744 - CPS_2825 - glyoxylase family protein 2756 40.88 0 2960994..2961881 - 295 71282439 - CPS_2826 - patatin-like phospholipase family protein 2757 38.33 0 2961940..2962359 - 139 71280772 - CPS_2827 - putative lipoprotein 2758 34.38 -1 2964796..2964891 + 31 71281484 - CPS_2835 - hypothetical protein 2759 40.55 0 2964909..2965823 + 304 71278231 - CPS_2836 - hypothetical protein 2760 41.21 0 2965857..2966453 - 198 71277949 dcd CPS_2837 - deoxycytidine triphosphate deaminase 2761 40.31 0 2966481..2967656 - 391 71279428 - CPS_2838 - putative mrp protein 2762 38.61 0 2967769..2969910 + 713 71281104 metG CPS_2839 - methionyl-tRNA synthetase 2763 37.35 0 2970074..2970496 + 140 71282149 - CPS_2840 - putative rcsF protein 2764 40.16 0 2970498..2971244 + 248 71282001 - CPS_2841 - hypothetical protein 2765 40.59 0 2971304..2971951 + 215 71280100 - CPS_2842 - hypothetical protein 2766 38.97 0 2972018..2972602 - 194 71278359 - CPS_2843 - putative tellurite resistance protein 2767 36.72 0 2972609..2972785 - 58 71281544 - CPS_2844 - hypothetical protein 2768 38.10 0 2973054..2973263 - 69 71280469 - CPS_2845 - hypothetical protein 2769 39.48 0 2973443..2973946 - 167 71281058 slyD1 CPS_2846 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 2770 42.11 +1 2974103..2975002 - 299 71279485 - CPS_2847 - membrane protein 2771 39.55 0 2975051..2978977 - 1308 71279169 sbcC CPS_2848 - exonuclease SbcC 2772 42.93 +1 2978974..2980494 - 506 71279760 sbcD CPS_2849 - exonuclease subunit SbcD 2773 39.63 0 2980640..2981512 - 290 71281702 - CPS_2850 - LysR family substrate binding transcriptional regulator 2774 43.74 +1 2981640..2982869 + 409 71282235 - CPS_2851 - major facilitator superfamily protein 2775 37.39 0 2982972..2983538 - 188 71278670 - CPS_2852 - hypothetical protein 2776 38.01 0 2983670..2983990 - 106 71279526 - CPS_2853 - hypothetical protein 2777 40.05 0 2983983..2984711 - 242 71280068 - CPS_2854 - putative branched-chain amino acid transport protein AzlC 2778 39.62 0 2984759..2985601 - 280 71279582 - CPS_2855 - AraC family substrate binding transcriptional regulator 2779 38.05 0 2985787..2986104 - 105 71280458 - CPS_2856 - hypothetical protein 2780 40.32 0 2986149..2987036 - 295 71282344 - CPS_2857 - ISCps9, transposase orfB 2781 37.33 0 2986967..2987341 - 124 71280638 - CPS_2858 - ISCps9, transposase orfA 2782 39.50 0 2987503..2988264 + 253 71282526 - CPS_2859 - ATP-binding protein 2783 37.63 0 2988364..2989155 - 263 71282580 - CPS_2860 - hypothetical protein 2784 34.29 -1 2989286..2989912 - 208 71281463 - CPS_2861 - hypothetical protein 2785 35.48 0 2989903..2990088 - 61 71278430 - CPS_2862 - hypothetical protein 2786 35.13 0 2990878..2991546 + 222 71277907 - CPS_2863 - putative lignin beta-etherase 2787 31.94 -1 2991787..2992074 - 95 71279829 - CPS_2864 - hypothetical protein 2788 35.48 0 2992196..2994847 - 883 71279238 - CPS_2865 - hypothetical protein 2789 34.28 -1 2995001..2995843 - 280 71281845 - CPS_2866 - hypothetical protein 2790 41.36 0 2996237..2999437 - 1066 71279090 - CPS_2867 - CzcA family heavy metal efflux protein 2791 41.87 +1 2999452..3000798 - 448 71280822 - CPS_2868 - RND family efflux transporter MFP subunit 2792 41.08 0 3000862..3002100 - 412 71281337 - CPS_2869 - putative lipoprotein 2793 38.22 0 3002387..3002734 - 115 71282417 - CPS_2870 - hypothetical protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0