version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2519 38.05 0 2690762..2691460 + 232 71281062 - CPS_2586 - DoxD-like family protein 2520 38.02 0 2691539..2692435 - 298 71278876 - CPS_2587 - membrane protein 2521 25.81 -2 2692423..2692515 + 30 71282212 - CPS_2588 - hypothetical protein 2522 40.82 0 2692628..2692774 - 48 71278182 - CPS_2589 - hypothetical protein 2523 40.03 0 2692968..2693564 + 198 71280852 - CPS_2590 - nitroreductase family protein 2524 39.90 0 2693676..2695076 - 466 71281666 asnC CPS_2591 - asparaginyl-tRNA synthetase 2525 38.46 0 2695330..2695719 + 129 71280361 - CPS_2592 - hypothetical protein 2526 40.34 0 2695775..2697115 - 446 71280862 bioA CPS_2593 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2527 38.77 0 2697203..2698306 + 367 71278955 bioB CPS_2594 - biotin synthase 2528 36.90 0 2698524..2699672 + 382 71279505 - CPS_2595 - putative 7-keto-8-aminopelargonic acid synthetase 2529 35.46 0 2699672..2700469 + 265 71279544 - CPS_2596 - biotin biosynthesis protein bioC 2530 36.99 0 2700653..2701444 + 263 71280146 bioD CPS_2597 - dethiobiotin synthase 2531 34.52 -1 2701704..2702126 - 140 71281128 - CPS_2598 - hypothetical protein 2532 37.72 0 2702605..2703744 + 379 71281080 - CPS_2599 - putative cell division protein FtsZ 2533 34.15 -1 2703841..2704575 + 244 71282578 - CPS_2600 - EAL domain-containing protein 2534 37.43 0 2704653..2705213 + 186 71281913 - CPS_2601 - anti-oxidant AhpCTSA family protein 2535 39.68 0 2705221..2705472 + 83 71281349 - CPS_2602 - hypothetical protein 2536 33.80 -1 2705610..2705825 + 71 71279886 - CPS_2603 - hypothetical protein 2537 30.21 -2 2706052..2706147 + 31 71279152 - CPS_2604 - hypothetical protein 2538 39.62 0 2706289..2707083 + 264 71278859 - CPS_2605 - LysR family transcriptional regulator 2539 35.80 0 2707135..2707458 - 107 71280662 - CPS_2606 - hypothetical protein 2540 36.15 0 2707834..2710998 + 1054 71281874 - CPS_2607 - GGDEF domain-containing protein 2541 37.81 0 2711366..2711566 - 66 71279788 - CPS_2608 - hypothetical protein 2542 34.24 -1 2712207..2713967 - 586 71277872 - CPS_2610 - hypothetical protein 2543 34.30 -1 2714012..2714218 - 68 71280657 - CPS_2611 - hypothetical protein 2544 36.27 0 2714353..2715408 + 351 71282404 - CPS_2612 - nucleoid-associated protein NdpA 2545 38.95 0 2715585..2716652 + 355 71278591 pyrC CPS_2613 - dihydroorotase 2546 38.27 0 2716784..2717674 + 296 71278177 - CPS_2614 - hypothetical protein 2547 40.72 0 2717667..2718533 + 288 71277911 - CPS_2615 - M24/M37 family peptidase 2548 36.41 0 2718571..2722302 + 1243 71279018 - CPS_2616 - hypothetical protein 2549 34.78 0 2722295..2722918 + 207 71280270 - CPS_2617 - hypothetical protein 2550 37.99 0 2722918..2724183 + 421 71280751 - CPS_2618 - hypothetical protein 2551 41.09 0 2724428..2724994 + 188 71282575 tehB CPS_2619 - tellurite resistance protein TehB 2552 35.47 0 2725216..2725449 + 77 71281843 - CPS_2620 - hypothetical protein 2553 34.60 0 2725798..2726271 + 157 71279658 - CPS_2621 - cytochrome c family protein 2554 38.58 0 2726306..2726743 + 145 71280345 - CPS_2622 - universal stress protein 2555 38.50 0 2726810..2728165 + 451 71281021 - CPS_2623 - metallo-beta-lactamase family protein 2556 35.24 0 2728260..2728364 + 34 71282345 - CPS_2624 - hypothetical protein 2557 44.44 +1 2729096..2729842 + 248 71278046 phbB1 CPS_2625 - acetoacetyl-CoA reductase 2558 48.80 +2 2729887..2731095 + 402 71280514 - CPS_2626 - acetyl-CoA acetyltransferase 2559 38.41 0 2731157..2731294 - 45 71278448 - CPS_2627 - hypothetical protein 2560 30.05 -2 2731839..2732051 + 70 71281614 - CPS_2628 - hypothetical protein 2561 37.71 0 2732472..2733728 + 418 71278258 - CPS_2629 - phage integrase family site specific recombinase 2562 32.48 -1 2733957..2734073 - 38 71278956 - CPS_2630 - hypothetical protein 2563 33.33 -1 2734060..2734164 - 34 71279319 - CPS_2631 - hypothetical protein 2564 34.15 -1 2734192..2734314 + 40 71280058 - CPS_2632 - hypothetical protein 2565 34.67 0 2734206..2734805 - 199 71280384 - CPS_2633 - hypothetical protein 2566 39.16 0 2734836..2738768 - 1310 71281061 - CPS_2634 - extracellular ribonuclease/nuclease fusion protein 2567 26.32 -2 2738795..2738908 - 37 71279820 - CPS_2635 - hypothetical protein 2568 39.26 0 2739167..2740027 - 286 71280620 - CPS_2636 - hypothetical protein 2569 40.03 0 2740255..2742150 - 631 71279025 - CPS_2637 - hypothetical protein 2570 38.70 0 2742493..2743014 + 173 71280097 msrA1 CPS_2638 - methionine sulfoxide reductase A 2571 38.41 0 2743053..2743190 - 45 71279528 - CPS_2639 - hypothetical protein 2572 40.21 0 2743200..2743853 + 217 71278650 - CPS_2640 - ABC transporter, ATP-binding protein 2573 38.81 0 2743837..2746248 + 803 71278130 - CPS_2641 - putative ABC transporter, permease protein 2574 41.21 0 2746256..2747410 + 384 71280435 - CPS_2642 - putative lipoprotein 2575 38.97 0 2747547..2747954 - 135 71281968 - CPS_2643 - acetyltransferase 2576 38.33 0 2748161..2748280 - 39 71279637 - CPS_2644 - hypothetical protein 2577 34.81 0 2748482..2748955 - 157 71279070 - CPS_2645 - TonB domain-containing protein 2578 39.25 0 2749181..2750803 - 540 71281295 - CPS_2646 - PKD domain-containing protein 2579 37.59 0 2751002..2752177 - 391 71280766 - CPS_2647 - hypothetical protein 2580 38.08 0 2752177..2753187 - 336 71282355 - CPS_2648 - carbohydrate kinase 2581 39.63 0 2753184..2754470 - 428 71281834 - CPS_2649 - glucose/galactose transporter family protein 2582 40.42 0 2754470..2757010 - 846 71277921 - CPS_2650 - alpha-1,2-mannosidase family protein 2583 39.27 0 2757074..2759497 - 807 71279848 - CPS_2651 - alpha-1,2-mannosidase family protein 2584 37.90 0 2759620..2760627 + 335 71279708 - CPS_2652 - LacI family transcription regulator 2585 40.10 0 2760991..2763813 + 940 71281044 - CPS_2653 - TonB-dependent receptor 2586 39.51 0 2763898..2765970 + 690 71282102 - CPS_2654 - PKD domain-containing protein 2587 34.77 0 2766394..2767296 + 300 71281521 - CPS_2655 - hypothetical protein 2588 41.60 +1 2767814..2768611 + 265 71278853 - CPS_2656 - CHAP domain-containing protein 2589 36.23 0 2768643..2768780 + 45 71278328 - CPS_2657 - hypothetical protein 2590 37.67 0 2770110..2771309 + 399 71279965 - CPS_2658 - DEAD-box ATP dependent DNA helicase 2591 34.17 -1 2771287..2771406 - 39 71279426 - CPS_2659 - hypothetical protein 2592 37.14 0 2771957..2773087 + 376 71280322 - CPS_2660 - methyl-accepting chemotaxis protein 2593 33.69 -1 2773129..2773977 + 282 71280833 - CPS_2661 - hypothetical protein 2594 36.36 0 2774064..2775350 + 428 71280605 - CPS_2662 - EAL domain-containing protein 2595 35.44 0 2775762..2776094 + 110 71280083 - CPS_2663 - hypothetical protein 2596 39.92 0 2776195..2777514 - 439 71281036 - CPS_2664 - hypothetical protein 2597 39.12 0 2777508..2777870 - 120 71282112 - CPS_2665 - DNA-binding protein 2598 39.00 0 2778213..2779376 - 387 71281512 - CPS_2666 - RND family efflux transporter MFP subunit 2599 40.57 0 2779386..2782493 - 1035 71278940 - CPS_2667 - AcrB/AcrD/AcrF family protein 2600 37.72 0 2782743..2783471 + 242 71278142 - CPS_2668 - hypothetical protein 2601 35.50 0 2783517..2784023 - 168 71279988 recX CPS_2669 - regulatory protein recX 2602 35.06 0 2784066..2784413 - 115 71278634 - CPS_2670 - hypothetical protein 2603 33.33 -1 2784663..2784869 - 68 71278883 dmpI CPS_2671 - 4-oxalocrotonate tautomerase 2604 38.46 0 2784920..2785309 - 129 71280462 - CPS_2672 - hypothetical protein 2605 40.69 0 2785388..2785999 - 203 71279955 - CPS_2673 - putative glutathione S-transferase 2606 38.31 0 2786222..2787106 + 294 71280634 - CPS_2674 - LysR family transcriptional regulator 2607 36.64 0 2787192..2787584 - 130 71281233 folK1 CPS_2675 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 2608 37.04 0 2787584..2787934 - 116 71278383 folX CPS_2676 - D-erythro-7,8-dihydroneopterin triphosphate epimerase 2609 39.25 0 2787907..2788683 - 258 71282628 - CPS_2677 - short chain dehydrogenase/reductase family oxidoreductase 2610 38.86 0 2788683..2789225 - 180 71277887 folE2 CPS_2678 - GTP cyclohydrolase I 2611 36.02 0 2789288..2789659 - 123 71278504 - CPS_2679 - hypothetical protein 2612 33.33 -1 2789717..2789923 - 68 71281493 - CPS_2680 - hypothetical protein 2613 37.88 0 2790001..2790396 - 131 71278308 - CPS_2681 - hypothetical protein 2614 39.54 0 2790567..2791823 - 418 71278874 umuC2 CPS_2682 - umuC protein 2615 40.34 0 2791811..2792224 - 137 71279451 umuD2 CPS_2683 - umuD protein 2616 40.88 0 2792509..2793873 + 454 71280002 - CPS_2684 - hypothetical protein 2617 37.02 0 2793857..2794642 + 261 71280550 - CPS_2685 - SPFH domain-containing protein/band 7 family protein 2618 35.84 0 2795001..2795399 - 132 71280997 - CPS_2686 - hypothetical protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0