version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1458 39.15 0 1538729..1540258 + 509 71280287 flrA CPS_1498 - flagellar regulatory protein A 1459 38.27 0 1540424..1541719 + 431 71279577 flrB CPS_1499 - flagellar regulatory protein B 1460 40.49 0 1541712..1543052 + 446 71280148 flrC CPS_1500 - flagellar regulatory protein C 1461 39.39 0 1543263..1543625 + 120 71279432 fliE CPS_1501 - flagellar hook-basal body complex protein FliE 1462 41.67 +1 1543859..1545550 + 563 71281873 fliF CPS_1502 - flagellar MS-ring protein 1463 42.52 +1 1545543..1546598 + 351 71280818 fliG CPS_1503 - flagellar motor switch protein G 1464 41.32 0 1546634..1547422 + 262 71279599 fliH CPS_1504 - flagellar assembly protein H 1465 42.00 +1 1547491..1548840 + 449 71281978 fliI CPS_1505 - flagellum-specific ATP synthase 1466 39.19 0 1548916..1549359 + 147 71282537 - CPS_1506 - flagellar protein FliJ 1467 38.63 0 1549536..1551518 + 660 71281010 - CPS_1507 - putative flagellar hook-length control protein 1468 40.54 0 1551659..1552213 + 184 71281246 fliL CPS_1508 - flagellar basal body-associated protein FliL 1469 39.34 0 1552287..1553351 + 354 71278806 fliM CPS_1509 - flagellar motor switch protein FliM 1470 37.88 0 1553393..1553788 + 131 71282178 fliN CPS_1510 - flagellar motor switch protein 1471 36.83 0 1553832..1554461 + 209 71282476 fliO CPS_1511 - flagellar protein FliO 1472 38.34 0 1554553..1555311 + 252 71282453 fliP CPS_1512 - flagellar biosynthesis protein FliP 1473 40.00 0 1555375..1555644 + 89 71278547 fliQ CPS_1513 - flagellar biosynthetic protein FliQ 1474 38.95 0 1555682..1556464 + 260 71277858 fliR CPS_1514 - flagellar biosynthesis protein FliR 1475 39.08 0 1556465..1557595 + 376 71281473 flhB CPS_1515 - flagellar biosynthesis protein FlhB 1476 39.80 0 1557742..1559844 + 700 71282152 flhA CPS_1516 - flagellar biosynthesis protein FlhA 1477 39.82 0 1559904..1561445 + 513 71280427 flhF CPS_1517 - flagellar biosynthesis regulator FlhF 1478 39.98 0 1561492..1562334 + 280 71280938 flhG CPS_1518 - flagellar biosynthetic protein FlhG 1479 36.94 0 1562374..1563093 + 239 71281710 fliA CPS_1519 - flagellar biosynthesis sigma factor 1480 35.16 0 1563201..1563584 + 127 71282029 cheY CPS_1520 - chemotaxis protein CheY 1481 37.16 0 1563671..1564402 + 243 71278344 cheZ CPS_1521 - chemotaxis protein CheZ 1482 39.39 0 1564416..1566560 + 714 71277814 cheA CPS_1522 - chemotaxis protein CheA 1483 38.60 0 1566644..1567783 + 379 71279726 cheB CPS_1523 - chemotaxis-specific methylesterase 1484 38.29 0 1567776..1568522 + 248 71279290 motA CPS_1524 - chemotaxis MotA protein 1485 37.07 0 1568519..1569508 + 329 71280429 - CPS_1525 - putative chemotaxis MotB protein 1486 38.28 0 1569599..1570387 + 262 161407973 - CPS_1526 - parA family protein 1487 34.87 0 1570421..1571137 + 238 71278336 - CPS_1527 - cheW-like domain-containing protein 1488 37.37 0 1571198..1571692 + 164 71278201 - CPS_1528 - chemotaxis protein CheW 1489 34.39 -1 1571817..1572287 + 156 71282610 - CPS_1529 - hypothetical protein 1490 38.58 0 1572437..1573237 + 266 71280964 - CPS_1530 - vacJ lipoprotein 1491 38.71 0 1573322..1573786 + 154 71279049 ribE2 CPS_1531 - 6,7-dimethyl-8-ribityllumazine synthase 1492 36.21 0 1573818..1574234 + 138 71279330 nusB CPS_1532 - transcription termination/antitermination factor NusB 1493 39.67 0 1574273..1575235 + 320 71278034 thiL CPS_1533 - thiamine-monophosphate kinase 1494 38.40 0 1575280..1575753 + 157 71278780 pgpA CPS_1534 - phosphatidylglycerophosphatase A 1495 36.13 0 1576163..1576519 + 118 71281923 yfiA2 CPS_1535 - ribosomal subunit interface protein 1496 39.33 0 1576958..1578208 + 416 71282633 - CPS_1536 - AcrA/E family efflux transporter MFP subunit 1497 40.21 0 1578223..1581336 + 1037 71280234 - CPS_1537 - hydrophobe/amphiphile efflux-1 family protein 1498 31.48 -1 1581512..1581673 - 53 71279116 - CPS_1538 - hypothetical protein 1499 35.68 0 1581721..1582146 - 141 71280874 - CPS_1539 - hypothetical protein 1500 39.87 0 1582295..1583701 + 468 71281141 dbpA CPS_1540 - ATP-dependent RNA helicase DbpA 1501 39.38 0 1583806..1584831 + 341 71279132 - CPS_1541 - AFG1 family ATPase 1502 37.86 0 1585383..1586222 + 279 71280116 - CPS_1542 - hypothetical protein 1503 37.08 0 1586325..1587125 + 266 71278044 - CPS_1543 - DTW domain-containing protein 1504 37.88 0 1587647..1588900 - 417 71278422 serA CPS_1544 - D-3-phosphoglycerate dehydrogenase 1505 40.94 0 1589082..1589738 - 218 71278882 rpiA CPS_1545 - ribose-5-phosphate isomerase A 1506 35.96 0 1589908..1590021 - 37 71282320 - CPS_1546 - hypothetical protein 1507 38.52 0 1590324..1590728 - 134 71280263 - CPS_1547 - putative lipoprotein 1508 41.43 0 1590991..1591830 - 279 71277820 dapD CPS_1548 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1509 37.58 0 1591907..1594543 - 878 71280085 glnD CPS_1549 - protein-P-II uridylyltransferase 1510 38.02 0 1594652..1595440 - 262 71279277 map CPS_1550 - methionine aminopeptidase 1511 30.39 -2 1595564..1595665 + 33 71281365 - CPS_1551 - hypothetical protein 1512 36.39 0 1595726..1596346 - 206 71280958 - CPS_1552 - hypothetical protein 1513 38.27 0 1597017..1597745 + 242 71282500 rpsB CPS_1553 - ribosomal protein S2 1514 41.34 0 1597880..1598728 + 282 71282116 tsf CPS_1554 - elongation factor Ts 1515 42.07 +1 1599241..1599984 + 247 71281716 pyrH CPS_1555 - uridylate kinase 1516 36.20 0 1600061..1600618 + 185 71278867 frr CPS_1556 - ribosome recycling factor 1517 39.87 0 1600727..1601491 + 254 71279416 uppS CPS_1557 - undecaprenyl diphosphate synthase 1518 37.50 0 1601592..1602455 + 287 71281039 cdsA CPS_1558 - phosphatidate cytidylyltransferase 1519 40.37 0 1602504..1603739 + 411 71280222 dxr CPS_1559 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1520 37.82 0 1603741..1605099 + 452 71282128 ecfE CPS_1560 - membrane-associated zinc metalloprotease EcfE 1521 38.83 0 1605425..1607878 + 817 71281584 - CPS_1561 - OMP85 family outer membrane protein 1522 34.30 -1 1607987..1608505 + 172 71281993 - CPS_1562 - OmpH family outer membrane protein 1523 41.62 +1 1608564..1609613 + 349 71278708 lpxD CPS_1563 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1524 35.76 0 1609744..1610196 + 150 71278178 fabZ CPS_1564 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1525 39.56 0 1610258..1611028 + 256 71279846 lpxA CPS_1565 - UDP-N-acetylglucosamine acyltransferase 1526 42.03 +1 1611047..1611184 + 45 71278982 - CPS_1566 - hypothetical protein 1527 43.48 +1 1611082..1611288 - 68 71281818 - CPS_1567 - hypothetical protein 1528 38.07 0 1611372..1612553 + 393 71282564 lpxB CPS_1568 - lipid-A-disaccharide synthase 1529 40.83 0 1612598..1613251 + 217 71279195 rnhB CPS_1569 - ribonuclease HII 1530 40.38 0 1613253..1616813 + 1186 71279814 dnaE CPS_1570 - DNA polymerase III subunit alpha 1531 41.90 +1 1616950..1617906 + 318 71281234 accA CPS_1571 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1532 39.24 0 1617949..1619337 + 462 71281989 tilS CPS_1572 - tRNA(Ile)-lysidine synthetase 1533 39.85 0 1619427..1620653 - 408 71278216 - CPS_1573 - serine/threonine transporter SstT 1534 40.00 0 1620834..1621403 + 189 71278202 - CPS_1574 - putative phosphonoacetate hydrolase PhnA 1535 33.11 -1 1621587..1622030 - 147 71279086 fur CPS_1575 - ferric uptake regulator 1536 37.52 0 1622204..1622728 - 174 71277974 - CPS_1576 - flavodoxin FldA 1537 36.17 0 1622756..1623037 - 93 71281757 - CPS_1577 - LexA regulated protein 1538 34.23 -1 1623041..1623262 - 73 71280177 - CPS_1578 - hypothetical protein 1539 37.09 0 1623462..1624259 - 265 71280699 - CPS_1579 - alpha/beta fold family hydrolase 1540 37.48 0 1624503..1625105 + 200 71279051 seqA CPS_1580 - replication initiation regulator SeqA 1541 41.34 0 1625159..1626820 + 553 71279588 pgm CPS_1581 - phosphoglucomutase 1542 40.69 0 1627210..1628391 + 393 71281526 - CPS_1582 - 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit 1543 40.49 0 1628661..1629638 + 325 71277818 - CPS_1583 - 2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit 1544 39.42 0 1629668..1630933 + 421 71279590 - CPS_1584 - 2-oxoisovalerate dehydrogenase complex, E2 component, lipoamide acyltransferase 1545 40.54 0 1631070..1632929 - 619 71279341 - CPS_1585 - zinc metallopeptidase family protein 1546 37.50 0 1633737..1634384 + 215 71281277 - CPS_1586 - TetR family transcriptional regulator 1547 38.71 0 1634437..1634529 + 30 71281031 - CPS_1587 - hypothetical protein 1548 30.95 -2 1634543..1634752 - 69 71282498 - CPS_1588 - hypothetical protein 1549 32.48 -1 1634771..1634887 - 38 71282061 - CPS_1589 - hypothetical protein 1550 38.38 0 1635005..1636372 + 455 71281612 - CPS_1590 - DEAD-box ATP dependent DNA helicase 1551 39.55 0 1636415..1637122 + 235 71282290 - CPS_1591 - hypothetical protein 1552 35.62 0 1637177..1638094 - 305 71281625 - CPS_1592 - GGDEF domain-containing protein 1553 39.48 0 1638456..1640423 + 655 71281867 - CPS_1593 - putative glutathione-regulated potassium-efflux system protein 1554 38.37 0 1640615..1641766 - 383 71278554 - CPS_1594 - patatin-like phospholipase family protein 1555 27.96 -2 1641772..1641864 + 30 71278225 - CPS_1595 - hypothetical protein 1556 37.31 0 1642012..1642413 - 133 71280167 - CPS_1596 - hypothetical protein 1557 40.03 0 1642744..1643400 - 218 71279103 dxnH CPS_1597 - 3-oxoadipate CoA-succinyl transferase, beta subunit 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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