version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1402 43.18 +1 1482555..1483082 + 175 71280314 - CPS_1441 - PAP2 family protein 1403 37.14 0 1483115..1483429 + 104 71279744 - CPS_1442 - hypothetical protein 1404 37.68 0 1483490..1484524 - 344 71281680 - CPS_1443 - hypothetical protein 1405 36.22 0 1484529..1485359 - 276 71280548 - CPS_1444 - hypothetical protein 1406 41.18 0 1485467..1487377 - 636 71282461 - CPS_1445 - hypothetical protein 1407 41.90 +1 1488754..1490037 - 427 71280545 - CPS_1447 - putative D-amino acid dehydrogenase, small subunit 1408 38.27 0 1490116..1490277 + 53 71280151 - CPS_1448 - hypothetical protein 1409 39.67 0 1490606..1491520 + 304 71281575 - CPS_1449 - dihydrodipicolinate synthetase family protein 1410 43.46 +1 1491713..1492630 + 305 71280867 - CPS_1450 - putative proline racemase 1411 43.77 +1 1492818..1494350 + 510 71278843 aldH CPS_1451 - fatty aldehyde dehydrogenase 1412 39.34 0 1494477..1496291 + 604 71278307 - CPS_1452 - hypothetical protein 1413 40.54 0 1496364..1497431 + 355 71277747 - CPS_1453 - putative proline racemase 1414 39.34 0 1497483..1498565 + 360 71279786 - CPS_1454 - putative Xaa-Pro aminopeptidase 1415 39.96 0 1498885..1499835 + 316 71280658 - CPS_1455 - ornithine cyclodeaminase 1416 36.26 0 1500110..1500382 - 90 71281179 - CPS_1456 - hypothetical protein 1417 36.66 0 1500522..1501424 + 300 71281974 - CPS_1457 - LysR family transcriptional regulator 1418 41.69 +1 1501591..1502559 - 322 71282369 - CPS_1458 - collagenase 1419 42.60 +1 1502792..1504021 - 409 71282081 - CPS_1459 - M24 family metallopeptidase 1420 35.85 0 1504137..1504295 + 52 71277862 - CPS_1460 - hypothetical protein 1421 42.78 +1 1504233..1505597 - 454 71278264 - CPS_1461 - putative oxidoreductase 1422 39.64 0 1505776..1506330 + 184 71278927 - CPS_1462 - hypothetical protein 1423 39.03 0 1506353..1507387 - 344 71280030 - CPS_1463 - hypothetical protein 1424 39.51 0 1507645..1507806 + 53 71281237 - CPS_1464 - hypothetical protein 1425 38.54 0 1508415..1508990 + 191 71281881 yeiP CPS_1465 - elongation factor P 1426 36.96 0 1509176..1509313 - 45 71282641 - CPS_1466 - hypothetical protein 1427 40.51 0 1509451..1510356 + 301 71277746 - CPS_1467 - zinc carboxypeptidase-related protein 1428 37.34 0 1510455..1511627 - 390 71278439 - CPS_1468 - putative lipoprotein 1429 39.69 0 1511891..1512535 + 214 71278404 - CPS_1469 - putative lipoprotein 1430 39.53 0 1512620..1513087 + 155 71279235 - CPS_1470 - putative lipoprotein 1431 39.82 0 1513200..1513646 - 148 71279801 - CPS_1471 - putative flagellar protein FlgN 1432 36.89 0 1513695..1514003 - 102 71281328 flgM CPS_1472 - negative regulator of flagellin synthesis FlgM 1433 33.19 -1 1514171..1514863 - 230 71280005 - CPS_1473 - putative flagellar basal-body P-ring formation protein FlgA 1434 39.35 0 1515071..1516000 + 309 71278949 cheV CPS_1474 - chemotaxis protein CheV 1435 46.34 +2 1516122..1516244 + 40 71281928 - CPS_1475 - hypothetical protein 1436 38.27 0 1516360..1517190 + 276 71280037 cheR CPS_1476 - chemotaxis protein methyltransferase CheR 1437 39.35 0 1517342..1517740 + 132 71278001 flgB CPS_1477 - flagellar basal-body rod protein FlgB 1438 42.59 +1 1517743..1518174 + 143 71280491 flgC CPS_1478 - flagellar basal-body rod protein FlgC 1439 43.84 +1 1518317..1519087 + 256 71282499 flgD CPS_1479 - basal-body rod modification protein FlgD 1440 42.16 +1 1519193..1520857 + 554 71280733 flgE CPS_1480 - flagellar hook protein FlgE 1441 41.40 0 1521080..1521823 + 247 71281915 flgF CPS_1481 - flagellar basal-body rod protein FlgF 1442 40.43 0 1521902..1522690 + 262 71282391 flgG CPS_1482 - flagellar basal body rod protein FlgG 1443 36.71 0 1522726..1523436 + 236 71277863 flgH CPS_1483 - flagellar basal body L-ring protein 1444 41.39 0 1523536..1524627 + 363 71279538 flgI CPS_1484 - flagellar basal body P-ring protein 1445 38.07 0 1525047..1526186 + 379 71281785 flgJ CPS_1485 - flagellar protein FlgJ 1446 40.99 0 1526377..1528374 + 665 71282480 - CPS_1486 - flagellar hook-associated protein 1447 38.49 0 1528385..1529605 + 406 71278519 flgL CPS_1487 - flagellar hook-associated protein FlgL 1448 44.59 +1 1529856..1531409 + 517 71281535 - CPS_1488 - flagellin 1449 37.88 0 1531755..1532216 + 153 71278304 - CPS_1489 - hypothetical protein 1450 43.65 +1 1532873..1534423 + 516 71278945 - CPS_1490 - flagellin 1451 37.25 0 1534614..1535021 + 135 71282154 flaG CPS_1491 - flagellin FlaG 1452 38.55 0 1535096..1536532 + 478 71280992 fliD CPS_1492 - flagellar hook-associated protein 2 1453 36.27 0 1536694..1536897 + 67 71277988 - CPS_1493 - hypothetical protein 1454 35.22 0 1536750..1537067 - 105 71278505 - CPS_1494 - hypothetical protein 1455 31.75 -1 1537131..1537508 - 125 71282392 - CPS_1495 - hypothetical protein 1456 37.59 0 1537508..1537906 - 132 71281914 fliS CPS_1496 - flagellar protein FliS 1457 36.14 0 1538013..1538297 - 94 71281282 - CPS_1497 - hypothetical protein 1458 39.15 0 1538729..1540258 + 509 71280287 flrA CPS_1498 - flagellar regulatory protein A 1459 38.27 0 1540424..1541719 + 431 71279577 flrB CPS_1499 - flagellar regulatory protein B 1460 40.49 0 1541712..1543052 + 446 71280148 flrC CPS_1500 - flagellar regulatory protein C 1461 39.39 0 1543263..1543625 + 120 71279432 fliE CPS_1501 - flagellar hook-basal body complex protein FliE 1462 41.67 +1 1543859..1545550 + 563 71281873 fliF CPS_1502 - flagellar MS-ring protein 1463 42.52 +1 1545543..1546598 + 351 71280818 fliG CPS_1503 - flagellar motor switch protein G 1464 41.32 0 1546634..1547422 + 262 71279599 fliH CPS_1504 - flagellar assembly protein H 1465 42.00 +1 1547491..1548840 + 449 71281978 fliI CPS_1505 - flagellum-specific ATP synthase 1466 39.19 0 1548916..1549359 + 147 71282537 - CPS_1506 - flagellar protein FliJ 1467 38.63 0 1549536..1551518 + 660 71281010 - CPS_1507 - putative flagellar hook-length control protein 1468 40.54 0 1551659..1552213 + 184 71281246 fliL CPS_1508 - flagellar basal body-associated protein FliL 1469 39.34 0 1552287..1553351 + 354 71278806 fliM CPS_1509 - flagellar motor switch protein FliM 1470 37.88 0 1553393..1553788 + 131 71282178 fliN CPS_1510 - flagellar motor switch protein 1471 36.83 0 1553832..1554461 + 209 71282476 fliO CPS_1511 - flagellar protein FliO 1472 38.34 0 1554553..1555311 + 252 71282453 fliP CPS_1512 - flagellar biosynthesis protein FliP 1473 40.00 0 1555375..1555644 + 89 71278547 fliQ CPS_1513 - flagellar biosynthetic protein FliQ 1474 38.95 0 1555682..1556464 + 260 71277858 fliR CPS_1514 - flagellar biosynthesis protein FliR 1475 39.08 0 1556465..1557595 + 376 71281473 flhB CPS_1515 - flagellar biosynthesis protein FlhB 1476 39.80 0 1557742..1559844 + 700 71282152 flhA CPS_1516 - flagellar biosynthesis protein FlhA 1477 39.82 0 1559904..1561445 + 513 71280427 flhF CPS_1517 - flagellar biosynthesis regulator FlhF 1478 39.98 0 1561492..1562334 + 280 71280938 flhG CPS_1518 - flagellar biosynthetic protein FlhG 1479 36.94 0 1562374..1563093 + 239 71281710 fliA CPS_1519 - flagellar biosynthesis sigma factor 1480 35.16 0 1563201..1563584 + 127 71282029 cheY CPS_1520 - chemotaxis protein CheY 1481 37.16 0 1563671..1564402 + 243 71278344 cheZ CPS_1521 - chemotaxis protein CheZ 1482 39.39 0 1564416..1566560 + 714 71277814 cheA CPS_1522 - chemotaxis protein CheA 1483 38.60 0 1566644..1567783 + 379 71279726 cheB CPS_1523 - chemotaxis-specific methylesterase 1484 38.29 0 1567776..1568522 + 248 71279290 motA CPS_1524 - chemotaxis MotA protein 1485 37.07 0 1568519..1569508 + 329 71280429 - CPS_1525 - putative chemotaxis MotB protein 1486 38.28 0 1569599..1570387 + 262 161407973 - CPS_1526 - parA family protein 1487 34.87 0 1570421..1571137 + 238 71278336 - CPS_1527 - cheW-like domain-containing protein 1488 37.37 0 1571198..1571692 + 164 71278201 - CPS_1528 - chemotaxis protein CheW 1489 34.39 -1 1571817..1572287 + 156 71282610 - CPS_1529 - hypothetical protein 1490 38.58 0 1572437..1573237 + 266 71280964 - CPS_1530 - vacJ lipoprotein 1491 38.71 0 1573322..1573786 + 154 71279049 ribE2 CPS_1531 - 6,7-dimethyl-8-ribityllumazine synthase 1492 36.21 0 1573818..1574234 + 138 71279330 nusB CPS_1532 - transcription termination/antitermination factor NusB 1493 39.67 0 1574273..1575235 + 320 71278034 thiL CPS_1533 - thiamine-monophosphate kinase 1494 38.40 0 1575280..1575753 + 157 71278780 pgpA CPS_1534 - phosphatidylglycerophosphatase A 1495 36.13 0 1576163..1576519 + 118 71281923 yfiA2 CPS_1535 - ribosomal subunit interface protein 1496 39.33 0 1576958..1578208 + 416 71282633 - CPS_1536 - AcrA/E family efflux transporter MFP subunit 1497 40.21 0 1578223..1581336 + 1037 71280234 - CPS_1537 - hydrophobe/amphiphile efflux-1 family protein 1498 31.48 -1 1581512..1581673 - 53 71279116 - CPS_1538 - hypothetical protein 1499 35.68 0 1581721..1582146 - 141 71280874 - CPS_1539 - hypothetical protein 1500 39.87 0 1582295..1583701 + 468 71281141 dbpA CPS_1540 - ATP-dependent RNA helicase DbpA 1501 39.38 0 1583806..1584831 + 341 71279132 - CPS_1541 - AFG1 family ATPase 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0