version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1340 37.50 0 1419586..1420545 + 319 71281429 - CPS_1379 - hypothetical protein 1341 38.92 0 1420655..1422067 + 470 71280055 phrB CPS_1380 - deoxyribodipyrimidine photolyase 1342 38.53 0 1422180..1422641 + 153 71279787 - CPS_1381 - hypothetical protein 1343 39.81 0 1422641..1423396 + 251 71280477 - CPS_1382 - short chain dehydrogenase/reductase family oxidoreductase 1344 37.38 0 1423393..1424703 + 436 71279409 - CPS_1383 - hypothetical protein 1345 36.02 0 1424690..1425508 + 272 71281525 - CPS_1384 - hypothetical protein 1346 38.17 0 1425620..1426777 + 385 71278309 cfa CPS_1385 - cyclopropane-fatty-acyl-phospholipid synthase 1347 37.33 0 1426866..1427816 - 316 71278880 - CPS_1386 - hypothetical protein 1348 36.56 0 1428047..1428325 + 92 71281490 - CPS_1387 - hypothetical protein 1349 36.44 0 1428353..1429027 + 224 71279444 phoP CPS_1388 - transcriptional regulatory protein PhoP 1350 37.37 0 1429054..1430466 + 470 71280204 phoQ CPS_1389 - sensor protein PhoQ 1351 38.89 0 1431044..1431169 - 41 71278098 - CPS_1390 - hypothetical protein 1352 38.39 0 1431260..1432288 - 342 71279229 - CPS_1391 - oxidoreductase, zinc-binding 1353 39.00 0 1432416..1433351 + 311 71277878 - CPS_1392 - LysR family transcriptional regulator 1354 38.71 0 1433453..1434883 + 476 71278387 - CPS_1393 - hypothetical protein 1355 37.82 0 1435065..1435532 - 155 71281980 - CPS_1394 - putative leucine-responsive regulatory protein 1356 37.01 0 1435652..1436602 + 316 71282510 - CPS_1395 - hypothetical protein 1357 35.22 0 1436742..1437323 - 193 71279224 - CPS_1396 - TetR family transcriptional regulator 1358 38.92 0 1437452..1438507 + 351 71280850 - CPS_1397 - oxidoreductase, FAD/FMN-binding 1359 43.29 +1 1438816..1439277 + 153 71278356 - CPS_1398 - hypothetical protein 1360 30.30 -2 1439258..1439356 + 32 71277822 - CPS_1399 - hypothetical protein 1361 35.59 0 1439487..1439885 + 132 71278941 - CPS_1400 - PAS repeat-containing protein 1362 38.59 0 1440001..1441047 - 348 71281972 - CPS_1401 - hypothetical protein 1363 36.77 0 1441206..1442486 - 426 71281296 - CPS_1402 - putative C4-dicarboxylate transporter family protein, DctM subunit 1364 35.81 0 1442483..1443007 - 174 71280913 - CPS_1403 - C4-dicarboxylate transporter family protein, DctQ subunit 1365 38.53 0 1443118..1444194 - 358 71281948 - CPS_1404 - extracellular solute-binding protein 1366 34.71 0 1444373..1445824 + 483 71279296 - CPS_1405 - sensor histidine kinase 1367 37.04 0 1445821..1446468 + 215 71279999 - CPS_1406 - DNA-binding response regulator 1368 36.83 0 1446485..1446970 - 161 71278221 - CPS_1407 - universal stress protein 1369 40.54 0 1447770..1449935 + 721 71277778 - CPS_1408 - neutral zinc metallopeptidase M4 family protein 1370 39.68 0 1450194..1451438 - 414 71281487 - CPS_1409 - ISCps4, transposase 1371 38.29 0 1452037..1452621 + 194 71282227 - CPS_1410 - TetR family transcriptional regulator 1372 35.89 0 1452858..1453523 + 221 71280466 - CPS_1411 - toluene tolerance family protein 1373 33.33 -1 1453516..1453656 - 46 71281130 - CPS_1412 - hypothetical protein 1374 40.16 0 1453728..1454357 + 209 71281313 - CPS_1413 - hypothetical protein 1375 38.50 0 1454467..1455666 - 399 71281514 - CPS_1414 - putative beta-lactamase 1376 38.02 0 1456210..1456572 + 120 71277854 - CPS_1415 - hypothetical protein 1377 33.56 -1 1456910..1457341 - 143 71282014 - CPS_1416 - hypothetical protein 1378 36.67 0 1457606..1457785 - 59 71278099 - CPS_1417 - hypothetical protein 1379 39.72 0 1457739..1458944 + 401 71282546 - CPS_1418 - DEAD-box ATP dependent DNA helicase 1380 38.47 0 1459054..1459890 - 278 71282547 - CPS_1419 - mechanosensitive ion channel family protein 1381 33.99 -1 1460410..1460865 + 151 71280554 - CPS_1420 - hypothetical protein 1382 30.11 -2 1460926..1461018 - 30 71281119 - CPS_1421 - hypothetical protein 1383 37.70 0 1460998..1461180 + 60 71279838 - CPS_1422 - hypothetical protein 1384 39.48 0 1461603..1462709 + 368 71279872 - CPS_1423 - hypothetical protein 1385 37.41 0 1462722..1463162 + 146 71281608 - CPS_1424 - hypothetical protein 1386 29.03 -2 1463147..1463239 + 30 71278169 - CPS_1425 - hypothetical protein 1387 39.89 0 1463252..1463998 + 248 71278719 rstA CPS_1426 - transcriptional regulatory protein RstA 1388 40.83 0 1464060..1465379 + 439 71279556 rstB CPS_1427 - sensor protein RstB 1389 27.04 -2 1465434..1465592 - 52 71277894 - CPS_1428 - hypothetical protein 1390 47.12 +2 1466082..1467350 + 422 71278590 - CPS_1429 - CAIB/BAIF family protein 1391 47.40 +2 1467493..1468260 + 255 71279575 - CPS_1430 - enoyl-CoA hydratase/isomerase family protein 1392 44.62 +1 1468346..1469506 + 386 71280666 - CPS_1431 - alcohol dehydrogenase, iron-containing 1393 45.09 +2 1469561..1471057 + 498 71278069 mmsA2 CPS_1432 - methylmalonate-semialdehyde dehydrogenase 1394 41.67 +1 1471225..1471992 + 255 71279425 - CPS_1433 - IclR family transcriptional regulator 1395 39.59 0 1472012..1472938 - 308 71279969 - CPS_1434 - LysR family substrate binding transcriptional regulator 1396 35.70 0 1473054..1473686 + 210 71280505 - CPS_1435 - amino acid transporter LysE 1397 38.54 0 1473858..1474337 - 159 71281028 creA CPS_1436 - creA protein 1398 26.67 -2 1474672..1474806 - 44 71282436 - CPS_1437 - hypothetical protein 1399 39.72 0 1474852..1476948 + 698 71282123 - CPS_1438 - hypothetical protein 1400 40.76 0 1477363..1479288 + 641 71278766 - CPS_1439 - methyl-accepting chemotaxis protein 1401 40.41 0 1480090..1482153 - 687 71280549 - CPS_1440 - neutral zinc metallopeptidase M13 family protein 1402 43.18 +1 1482555..1483082 + 175 71280314 - CPS_1441 - PAP2 family protein 1403 37.14 0 1483115..1483429 + 104 71279744 - CPS_1442 - hypothetical protein 1404 37.68 0 1483490..1484524 - 344 71281680 - CPS_1443 - hypothetical protein 1405 36.22 0 1484529..1485359 - 276 71280548 - CPS_1444 - hypothetical protein 1406 41.18 0 1485467..1487377 - 636 71282461 - CPS_1445 - hypothetical protein 1407 41.90 +1 1488754..1490037 - 427 71280545 - CPS_1447 - putative D-amino acid dehydrogenase, small subunit 1408 38.27 0 1490116..1490277 + 53 71280151 - CPS_1448 - hypothetical protein 1409 39.67 0 1490606..1491520 + 304 71281575 - CPS_1449 - dihydrodipicolinate synthetase family protein 1410 43.46 +1 1491713..1492630 + 305 71280867 - CPS_1450 - putative proline racemase 1411 43.77 +1 1492818..1494350 + 510 71278843 aldH CPS_1451 - fatty aldehyde dehydrogenase 1412 39.34 0 1494477..1496291 + 604 71278307 - CPS_1452 - hypothetical protein 1413 40.54 0 1496364..1497431 + 355 71277747 - CPS_1453 - putative proline racemase 1414 39.34 0 1497483..1498565 + 360 71279786 - CPS_1454 - putative Xaa-Pro aminopeptidase 1415 39.96 0 1498885..1499835 + 316 71280658 - CPS_1455 - ornithine cyclodeaminase 1416 36.26 0 1500110..1500382 - 90 71281179 - CPS_1456 - hypothetical protein 1417 36.66 0 1500522..1501424 + 300 71281974 - CPS_1457 - LysR family transcriptional regulator 1418 41.69 +1 1501591..1502559 - 322 71282369 - CPS_1458 - collagenase 1419 42.60 +1 1502792..1504021 - 409 71282081 - CPS_1459 - M24 family metallopeptidase 1420 35.85 0 1504137..1504295 + 52 71277862 - CPS_1460 - hypothetical protein 1421 42.78 +1 1504233..1505597 - 454 71278264 - CPS_1461 - putative oxidoreductase 1422 39.64 0 1505776..1506330 + 184 71278927 - CPS_1462 - hypothetical protein 1423 39.03 0 1506353..1507387 - 344 71280030 - CPS_1463 - hypothetical protein 1424 39.51 0 1507645..1507806 + 53 71281237 - CPS_1464 - hypothetical protein 1425 38.54 0 1508415..1508990 + 191 71281881 yeiP CPS_1465 - elongation factor P 1426 36.96 0 1509176..1509313 - 45 71282641 - CPS_1466 - hypothetical protein 1427 40.51 0 1509451..1510356 + 301 71277746 - CPS_1467 - zinc carboxypeptidase-related protein 1428 37.34 0 1510455..1511627 - 390 71278439 - CPS_1468 - putative lipoprotein 1429 39.69 0 1511891..1512535 + 214 71278404 - CPS_1469 - putative lipoprotein 1430 39.53 0 1512620..1513087 + 155 71279235 - CPS_1470 - putative lipoprotein 1431 39.82 0 1513200..1513646 - 148 71279801 - CPS_1471 - putative flagellar protein FlgN 1432 36.89 0 1513695..1514003 - 102 71281328 flgM CPS_1472 - negative regulator of flagellin synthesis FlgM 1433 33.19 -1 1514171..1514863 - 230 71280005 - CPS_1473 - putative flagellar basal-body P-ring formation protein FlgA 1434 39.35 0 1515071..1516000 + 309 71278949 cheV CPS_1474 - chemotaxis protein CheV 1435 46.34 +2 1516122..1516244 + 40 71281928 - CPS_1475 - hypothetical protein 1436 38.27 0 1516360..1517190 + 276 71280037 cheR CPS_1476 - chemotaxis protein methyltransferase CheR 1437 39.35 0 1517342..1517740 + 132 71278001 flgB CPS_1477 - flagellar basal-body rod protein FlgB 1438 42.59 +1 1517743..1518174 + 143 71280491 flgC CPS_1478 - flagellar basal-body rod protein FlgC 1439 43.84 +1 1518317..1519087 + 256 71282499 flgD CPS_1479 - basal-body rod modification protein FlgD 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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