version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1297 39.72 0 1373958..1374662 + 234 71278757 - CPS_1336 - hypothetical protein 1298 42.56 +1 1374712..1375188 + 158 71278194 - CPS_1337 - MarR family transcriptional regulator 1299 41.42 0 1375435..1376757 + 440 71280133 - CPS_1338 - putative glutamate-1-semialdehyde-2,1-aminomutase 1300 36.02 0 1377034..1377294 + 86 71280179 - CPS_1339 - DnaJ domain-containing protein 1301 36.15 0 1377398..1377859 + 153 71279501 - CPS_1340 - hypothetical protein 1302 36.42 0 1378005..1378652 + 215 71279478 - CPS_1341 - hypothetical protein 1303 33.33 -1 1378698..1379618 + 306 71278668 - CPS_1342 - hypothetical protein 1304 39.08 0 1380071..1381045 - 324 71282097 - CPS_1343 - di-haem cytochrome c peroxidase 1305 43.63 +1 1381190..1383412 - 740 71282528 katG CPS_1344 - catalase/peroxidase HPI 1306 37.50 0 1383576..1383719 + 47 71281672 - CPS_1345 - hypothetical protein 1307 37.18 0 1383849..1384757 + 302 71280855 - CPS_1346 - LysR family transcriptional regulator 1308 39.91 0 1385199..1387661 + 820 71280525 - CPS_1347 - TonB-dependent receptor 1309 41.46 0 1387811..1389115 - 434 71280007 - CPS_1348 - putative Xaa-Pro dipeptidase 1310 32.80 -1 1389468..1390028 - 186 71279961 - CPS_1349 - CBS domain-containing protein 1311 30.79 -2 1390078..1390392 - 104 71279406 - CPS_1350 - hypothetical protein 1312 31.35 -1 1390469..1390771 - 100 71280995 - CPS_1351 - hypothetical protein 1313 32.77 -1 1391131..1392366 + 411 71280448 - CPS_1352 - hypothetical protein 1314 37.17 0 1392884..1393222 + 112 71282103 - CPS_1353 - hypothetical protein 1315 40.48 0 1393776..1396001 + 741 71281559 - CPS_1354 - isocitrate dehydrogenase, NADP-dependent 1316 41.69 +1 1396104..1399262 - 1052 71278690 - CPS_1355 - hydrophobe/amphiphile efflux-1 family protein 1317 41.09 0 1399274..1400497 - 407 71278213 - CPS_1356 - AcrA/E family efflux transporter MFP subunit 1318 39.22 0 1400603..1400806 + 67 71280141 - CPS_1357 - hypothetical protein 1319 37.77 0 1400933..1401541 + 202 71279509 - CPS_1358 - TetR family transcriptional regulator 1320 39.27 0 1401868..1402878 + 336 71279112 add1 CPS_1359 - adenosine deaminase 1321 37.98 0 1403112..1404014 - 300 71281310 - CPS_1360 - radical SAM domain-containing protein 1322 34.79 0 1404053..1405012 - 319 71279239 - CPS_1361 - hypothetical protein 1323 32.08 -1 1405116..1405274 - 52 71280998 - CPS_1362 - hypothetical protein 1324 39.74 0 1405399..1406913 - 504 71280053 - CPS_1363 - hypothetical protein 1325 30.34 -2 1406986..1407219 + 77 71278706 - CPS_1364 - hypothetical protein 1326 37.94 0 1407420..1408223 + 267 71277924 - CPS_1365 - LysR family substrate binding transcriptional regulator 1327 38.82 0 1408665..1410269 + 534 71282298 - CPS_1366 - ABC transporter, ATP-binding protein 1328 35.26 0 1410647..1410802 + 51 71281430 - CPS_1367 - hypothetical protein 1329 36.72 0 1410921..1411304 + 127 71280131 - CPS_1368 - hypothetical protein 1330 43.83 +1 1411186..1411347 + 53 71279580 - CPS_1369 - hypothetical protein 1331 45.83 +2 1411244..1411363 + 39 71278466 - CPS_1370 - hypothetical protein 1332 39.94 0 1411457..1412848 - 463 71279012 - CPS_1371 - MATE efflux family protein 1333 34.51 -1 1413127..1413636 + 169 71282425 - CPS_1372 - hypothetical protein 1334 35.71 0 1413629..1414216 + 195 71278009 - CPS_1373 - hypothetical protein 1335 35.98 0 1414209..1414775 + 188 71281868 - CPS_1374 - putative lipoprotein 1336 40.58 0 1415210..1417045 + 611 71282397 - CPS_1375 - putative adhesion lipoprotein 1337 37.29 0 1417503..1418084 + 193 71280759 - CPS_1376 - hypothetical protein 1338 38.35 0 1418223..1418840 + 205 71281355 - CPS_1377 - RNA polymerase sigma factor 1339 36.54 0 1418833..1419519 + 228 71278561 - CPS_1378 - putative transcriptional activator 1340 37.50 0 1419586..1420545 + 319 71281429 - CPS_1379 - hypothetical protein 1341 38.92 0 1420655..1422067 + 470 71280055 phrB CPS_1380 - deoxyribodipyrimidine photolyase 1342 38.53 0 1422180..1422641 + 153 71279787 - CPS_1381 - hypothetical protein 1343 39.81 0 1422641..1423396 + 251 71280477 - CPS_1382 - short chain dehydrogenase/reductase family oxidoreductase 1344 37.38 0 1423393..1424703 + 436 71279409 - CPS_1383 - hypothetical protein 1345 36.02 0 1424690..1425508 + 272 71281525 - CPS_1384 - hypothetical protein 1346 38.17 0 1425620..1426777 + 385 71278309 cfa CPS_1385 - cyclopropane-fatty-acyl-phospholipid synthase 1347 37.33 0 1426866..1427816 - 316 71278880 - CPS_1386 - hypothetical protein 1348 36.56 0 1428047..1428325 + 92 71281490 - CPS_1387 - hypothetical protein 1349 36.44 0 1428353..1429027 + 224 71279444 phoP CPS_1388 - transcriptional regulatory protein PhoP 1350 37.37 0 1429054..1430466 + 470 71280204 phoQ CPS_1389 - sensor protein PhoQ 1351 38.89 0 1431044..1431169 - 41 71278098 - CPS_1390 - hypothetical protein 1352 38.39 0 1431260..1432288 - 342 71279229 - CPS_1391 - oxidoreductase, zinc-binding 1353 39.00 0 1432416..1433351 + 311 71277878 - CPS_1392 - LysR family transcriptional regulator 1354 38.71 0 1433453..1434883 + 476 71278387 - CPS_1393 - hypothetical protein 1355 37.82 0 1435065..1435532 - 155 71281980 - CPS_1394 - putative leucine-responsive regulatory protein 1356 37.01 0 1435652..1436602 + 316 71282510 - CPS_1395 - hypothetical protein 1357 35.22 0 1436742..1437323 - 193 71279224 - CPS_1396 - TetR family transcriptional regulator 1358 38.92 0 1437452..1438507 + 351 71280850 - CPS_1397 - oxidoreductase, FAD/FMN-binding 1359 43.29 +1 1438816..1439277 + 153 71278356 - CPS_1398 - hypothetical protein 1360 30.30 -2 1439258..1439356 + 32 71277822 - CPS_1399 - hypothetical protein 1361 35.59 0 1439487..1439885 + 132 71278941 - CPS_1400 - PAS repeat-containing protein 1362 38.59 0 1440001..1441047 - 348 71281972 - CPS_1401 - hypothetical protein 1363 36.77 0 1441206..1442486 - 426 71281296 - CPS_1402 - putative C4-dicarboxylate transporter family protein, DctM subunit 1364 35.81 0 1442483..1443007 - 174 71280913 - CPS_1403 - C4-dicarboxylate transporter family protein, DctQ subunit 1365 38.53 0 1443118..1444194 - 358 71281948 - CPS_1404 - extracellular solute-binding protein 1366 34.71 0 1444373..1445824 + 483 71279296 - CPS_1405 - sensor histidine kinase 1367 37.04 0 1445821..1446468 + 215 71279999 - CPS_1406 - DNA-binding response regulator 1368 36.83 0 1446485..1446970 - 161 71278221 - CPS_1407 - universal stress protein 1369 40.54 0 1447770..1449935 + 721 71277778 - CPS_1408 - neutral zinc metallopeptidase M4 family protein 1370 39.68 0 1450194..1451438 - 414 71281487 - CPS_1409 - ISCps4, transposase 1371 38.29 0 1452037..1452621 + 194 71282227 - CPS_1410 - TetR family transcriptional regulator 1372 35.89 0 1452858..1453523 + 221 71280466 - CPS_1411 - toluene tolerance family protein 1373 33.33 -1 1453516..1453656 - 46 71281130 - CPS_1412 - hypothetical protein 1374 40.16 0 1453728..1454357 + 209 71281313 - CPS_1413 - hypothetical protein 1375 38.50 0 1454467..1455666 - 399 71281514 - CPS_1414 - putative beta-lactamase 1376 38.02 0 1456210..1456572 + 120 71277854 - CPS_1415 - hypothetical protein 1377 33.56 -1 1456910..1457341 - 143 71282014 - CPS_1416 - hypothetical protein 1378 36.67 0 1457606..1457785 - 59 71278099 - CPS_1417 - hypothetical protein 1379 39.72 0 1457739..1458944 + 401 71282546 - CPS_1418 - DEAD-box ATP dependent DNA helicase 1380 38.47 0 1459054..1459890 - 278 71282547 - CPS_1419 - mechanosensitive ion channel family protein 1381 33.99 -1 1460410..1460865 + 151 71280554 - CPS_1420 - hypothetical protein 1382 30.11 -2 1460926..1461018 - 30 71281119 - CPS_1421 - hypothetical protein 1383 37.70 0 1460998..1461180 + 60 71279838 - CPS_1422 - hypothetical protein 1384 39.48 0 1461603..1462709 + 368 71279872 - CPS_1423 - hypothetical protein 1385 37.41 0 1462722..1463162 + 146 71281608 - CPS_1424 - hypothetical protein 1386 29.03 -2 1463147..1463239 + 30 71278169 - CPS_1425 - hypothetical protein 1387 39.89 0 1463252..1463998 + 248 71278719 rstA CPS_1426 - transcriptional regulatory protein RstA 1388 40.83 0 1464060..1465379 + 439 71279556 rstB CPS_1427 - sensor protein RstB 1389 27.04 -2 1465434..1465592 - 52 71277894 - CPS_1428 - hypothetical protein 1390 47.12 +2 1466082..1467350 + 422 71278590 - CPS_1429 - CAIB/BAIF family protein 1391 47.40 +2 1467493..1468260 + 255 71279575 - CPS_1430 - enoyl-CoA hydratase/isomerase family protein 1392 44.62 +1 1468346..1469506 + 386 71280666 - CPS_1431 - alcohol dehydrogenase, iron-containing 1393 45.09 +2 1469561..1471057 + 498 71278069 mmsA2 CPS_1432 - methylmalonate-semialdehyde dehydrogenase 1394 41.67 +1 1471225..1471992 + 255 71279425 - CPS_1433 - IclR family transcriptional regulator 1395 39.59 0 1472012..1472938 - 308 71279969 - CPS_1434 - LysR family substrate binding transcriptional regulator 1396 35.70 0 1473054..1473686 + 210 71280505 - CPS_1435 - amino acid transporter LysE 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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