version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1210 40.64 0 1280353..1281324 - 323 71278096 - CPS_1249 - ABC transporter, ATP-binding protein 1211 44.07 +1 1281321..1282289 - 322 71279735 - CPS_1250 - hypothetical protein 1212 40.72 0 1282425..1282871 - 148 71279034 - CPS_1251 - Holliday junction resolvase-like protein 1213 40.57 0 1282974..1283678 - 234 71278931 - CPS_1252 - hypothetical protein 1214 38.94 0 1283691..1284653 - 320 71278064 gshB CPS_1253 - glutathione synthetase 1215 40.82 0 1284938..1285672 - 244 71280059 - CPS_1254 - hypothetical protein 1216 37.48 0 1285836..1286438 + 200 71281035 - CPS_1255 - hypothetical protein 1217 39.98 0 1286654..1287841 - 395 71280871 metK CPS_1256 - S-adenosylmethionine synthetase 1218 38.00 0 1288023..1288793 - 256 71280369 murI CPS_1257 - glutamate racemase 1219 39.50 0 1289047..1290375 + 442 71282158 - CPS_1258 - putative MFS transporter family protein 1220 34.16 -1 1290673..1291878 - 401 71279108 - CPS_1259 - putative sensor histidine kinase 1221 38.81 0 1292246..1292866 - 206 71280792 - CPS_1260 - putative nitrate/nitrite DNA-binding response regulator 1222 38.53 0 1292882..1294285 - 467 71282408 - CPS_1261 - sensor histidine kinase 1223 42.16 +1 1294309..1294512 + 67 71281849 - CPS_1262 - hypothetical protein 1224 39.39 0 1295571..1296611 + 346 71281682 - CPS_1263 - hypothetical protein 1225 38.97 0 1296642..1297706 + 354 71278630 - CPS_1264 - extracellular solute-binding protein 1226 38.43 0 1298064..1298612 + 182 71279030 - CPS_1265 - C4-dicarboxylate transporter family protein, DctQ subunit 1227 39.09 0 1298615..1300003 + 462 71280689 - CPS_1266 - putative C4-dicarboxylate transporter family protein, DctM subunit 1228 37.46 0 1300181..1301854 + 557 71282609 - CPS_1267 - methyl-accepting chemotaxis protein 1229 35.92 0 1302650..1302958 - 102 71282346 - CPS_1268 - hypothetical protein 1230 38.24 0 1303050..1303151 + 33 71280275 - CPS_1269 - hypothetical protein 1231 37.48 0 1303162..1303764 + 200 71280947 - CPS_1270 - hypothetical protein 1232 39.39 0 1303867..1305252 + 461 71281317 pepP CPS_1271 - Xaa-Pro aminopeptidase 1233 41.48 0 1305439..1306752 + 437 71279860 ubiH CPS_1272 - 2-octaprenyl-6-methoxyphenol hydroxylase 1234 42.59 +1 1306849..1308177 + 442 71278061 - CPS_1273 - monooxygenase family protein 1235 41.32 0 1308798..1309886 + 362 71282177 gcvT CPS_1274 - glycine cleavage system aminomethyltransferase T 1236 40.77 0 1310018..1310407 + 129 71280736 gcvH1 CPS_1275 - glycine cleavage system H protein 1237 41.30 0 1310695..1313592 + 965 71281092 gcvP1 CPS_1276 - glycine dehydrogenase 1238 35.04 0 1313828..1314646 + 272 71278518 - CPS_1277 - hypothetical protein 1239 30.88 -2 1314810..1316684 + 624 71278887 - CPS_1278 - putative lipoprotein 1240 35.04 0 1317459..1317809 + 116 71281865 - CPS_1279 - hypothetical protein 1241 34.09 -1 1317899..1318162 - 87 71282043 - CPS_1280 - putative lipoprotein 1242 39.68 0 1318228..1320135 - 635 71280773 - CPS_1281 - metallo-beta-lactamase family protien 1243 36.81 0 1320261..1321181 + 306 71281111 - CPS_1282 - LysR family transcriptional regulator 1244 44.75 +1 1321233..1322756 - 507 71279168 - CPS_1283 - hypothetical protein 1245 38.45 0 1323237..1324214 + 325 71279402 - CPS_1284 - metallo-beta-lactamase family protein 1246 39.01 0 1324417..1325490 + 357 71279959 - CPS_1285 - DJ-1/PfpI family protein 1247 39.23 0 1325821..1328721 + 966 71282331 - CPS_1286 - M16 family metallopeptidase 1248 40.88 0 1328843..1329478 - 211 71281987 - CPS_1287 - Ser/Thr protein phosphatase family protein 1249 34.69 0 1330142..1332199 - 685 71281214 - CPS_1288 - sensory box protein 1250 40.42 0 1332738..1333556 - 272 71280240 - CPS_1289 - ISCps2, transposase orfB 1251 39.39 0 1333601..1333897 - 98 71279135 - CPS_1290 - ISCps2, transposase orfA 1252 34.50 -1 1334049..1334903 - 284 71278453 - CPS_1291 - sensory box protein 1253 33.33 -1 1335032..1335139 + 35 71278602 - CPS_1292 - hypothetical protein 1254 29.52 -2 1335464..1335568 - 34 71277904 - CPS_1293 - hypothetical protein 1255 37.74 0 1335707..1336636 - 309 71282479 - CPS_1294 - hypothetical protein 1256 38.98 0 1336944..1337651 - 235 71280376 - CPS_1295 - hypothetical protein 1257 38.96 0 1337863..1338768 + 301 71280432 - CPS_1296 - LysR family transcriptional regulator 1258 31.27 -1 1338803..1339141 - 112 71282187 - CPS_1297 - hypothetical protein 1259 37.76 0 1339502..1339840 + 112 71281504 phnA CPS_1298 - alkylphosphonate utilization operon protein PhnA 1260 43.81 +1 1339837..1339941 - 34 71278954 - CPS_1299 - hypothetical protein 1261 40.15 0 1340024..1341094 - 356 71278974 - CPS_1300 - cobalamin synthesis protein/P47K family protein 1262 39.64 0 1341379..1341996 + 205 71279953 - CPS_1301 - hypothetical protein 1263 40.49 0 1342562..1344112 + 516 71278259 - CPS_1302 - putative helicase 1264 43.59 +1 1344169..1344285 - 38 71281586 - CPS_1303 - hypothetical protein 1265 39.49 0 1344350..1345567 + 405 71281583 - CPS_1304 - hypothetical protein 1266 38.46 0 1345640..1346185 - 181 71282042 - CPS_1305 - TetR family transcriptional regulator 1267 37.01 0 1346332..1346766 + 144 71280455 - CPS_1306 - hypothetical protein 1268 37.36 0 1346776..1347693 + 305 71280982 - CPS_1307 - hypothetical protein 1269 38.85 0 1347758..1348990 - 410 71280189 - CPS_1308 - endonuclease/exonuclease/phosphatase family protein 1270 36.96 0 1349035..1349172 - 45 71278140 - CPS_1309 - hypothetical protein 1271 32.34 -1 1349376..1350080 - 234 71281645 - CPS_1310 - hypothetical protein 1272 38.97 0 1350290..1350484 + 64 71280397 - CPS_1311 - hypothetical protein 1273 40.47 0 1350540..1351814 - 424 71281095 argJ CPS_1312 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1274 39.91 0 1352423..1354324 - 633 71281082 dnaK1 CPS_1313 - chaperone protein DnaK 1275 36.73 0 1354369..1354515 - 48 71279915 - CPS_1314 - hypothetical protein 1276 33.59 -1 1354685..1355449 + 254 71278119 - CPS_1315 - hypothetical protein 1277 37.62 0 1355497..1356780 - 427 71278899 - CPS_1316 - putative peptidoglycan-binding protein 1278 41.48 0 1356861..1357817 - 318 71278909 - CPS_1317 - LysR family transcriptional regulator 1279 42.53 +1 1357922..1358932 + 336 71281437 - CPS_1318 - putative cyclase 1280 40.90 0 1359027..1359383 - 118 71282147 - CPS_1319 - transcriptional regulator 1281 29.03 -2 1359380..1359472 - 30 71280200 - CPS_1320 - hypothetical protein 1282 44.59 +1 1359539..1360870 + 443 71280578 - CPS_1321 - aldehyde dehydrogenase (NAD) family protein 1283 39.44 0 1360927..1361712 + 261 71281760 - CPS_1322 - 2OG-Fe(II) oxygenase family oxidoreductase 1284 33.99 -1 1361856..1362314 - 152 71282456 - CPS_1323 - hypothetical protein 1285 43.90 +1 1362598..1363818 + 406 71278018 - CPS_1324 - hypothetical protein 1286 38.07 0 1363906..1365192 - 428 71278350 - CPS_1325 - sensory box protein 1287 38.46 0 1365619..1366008 + 129 71278474 pcaC CPS_1326 - 4-carboxymuconolactone decarboxylase 1288 40.14 0 1365986..1366132 - 48 71278846 - CPS_1327 - hypothetical protein 1289 36.51 0 1366287..1366412 - 41 71279568 - CPS_1328 - hypothetical protein 1290 39.24 0 1366479..1367138 - 219 71279142 - CPS_1329 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 1291 33.55 -1 1367345..1367800 - 151 71279878 - CPS_1330 - hypothetical protein 1292 33.33 -1 1367927..1368085 - 52 71280843 - CPS_1331 - hypothetical protein 1293 42.13 +1 1368609..1369199 + 196 71280296 betI1 CPS_1332 - transcriptional regulator BetI 1294 42.01 +1 1369190..1370653 + 487 71280631 betB1 CPS_1333 - betaine aldehyde dehydrogenase 1295 41.53 0 1370783..1372465 + 560 71281628 betA1 CPS_1334 - choline dehydrogenase 1296 38.67 0 1372704..1373921 + 405 71281979 - CPS_1335 - putative transporter, BCCT family protein 1297 39.72 0 1373958..1374662 + 234 71278757 - CPS_1336 - hypothetical protein 1298 42.56 +1 1374712..1375188 + 158 71278194 - CPS_1337 - MarR family transcriptional regulator 1299 41.42 0 1375435..1376757 + 440 71280133 - CPS_1338 - putative glutamate-1-semialdehyde-2,1-aminomutase 1300 36.02 0 1377034..1377294 + 86 71280179 - CPS_1339 - DnaJ domain-containing protein 1301 36.15 0 1377398..1377859 + 153 71279501 - CPS_1340 - hypothetical protein 1302 36.42 0 1378005..1378652 + 215 71279478 - CPS_1341 - hypothetical protein 1303 33.33 -1 1378698..1379618 + 306 71278668 - CPS_1342 - hypothetical protein 1304 39.08 0 1380071..1381045 - 324 71282097 - CPS_1343 - di-haem cytochrome c peroxidase 1305 43.63 +1 1381190..1383412 - 740 71282528 katG CPS_1344 - catalase/peroxidase HPI 1306 37.50 0 1383576..1383719 + 47 71281672 - CPS_1345 - hypothetical protein 1307 37.18 0 1383849..1384757 + 302 71280855 - CPS_1346 - LysR family transcriptional regulator 1308 39.91 0 1385199..1387661 + 820 71280525 - CPS_1347 - TonB-dependent receptor 1309 41.46 0 1387811..1389115 - 434 71280007 - CPS_1348 - putative Xaa-Pro dipeptidase 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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