version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1172 40.32 0 1244343..1245272 + 309 71277944 ispH CPS_1211 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1173 27.45 -2 1245325..1245426 + 33 71279663 - CPS_1212 - hypothetical protein 1174 44.67 +1 1245807..1246388 + 193 71281505 pilV CPS_1213 - type IV pilus modification protein PilV 1175 41.38 0 1246661..1247629 + 322 71281995 - CPS_1214 - hypothetical protein 1176 38.43 0 1247634..1248182 + 182 71278763 - CPS_1215 - hypothetical protein 1177 40.37 0 1248219..1251986 + 1255 71279463 - CPS_1216 - hypothetical protein 1178 39.20 0 1251986..1252411 + 141 71280185 pilE CPS_1217 - type IV pilus biogenesis protein PilE 1179 34.48 -1 1252414..1252761 + 115 71280255 - CPS_1218 - hypothetical protein 1180 39.78 0 1252900..1253442 - 180 71281725 - CPS_1219 - putative type IV pilus biogenesis protein 1181 27.19 -2 1253480..1253593 + 37 71280571 - CPS_1220 - hypothetical protein 1182 38.10 0 1253678..1254853 - 391 71278851 pheA CPS_1221 - chorismate mutase/prephenate dehydratase 1183 38.76 0 1254961..1255347 - 128 71281908 - CPS_1222 - hypothetical protein 1184 39.42 0 1255400..1257832 - 810 71277793 - CPS_1223 - penicillin amidase family protein 1185 44.17 +1 1257949..1258068 + 39 71279871 - CPS_1224 - hypothetical protein 1186 31.25 -1 1258085..1258516 - 143 71278758 - CPS_1225 - hypothetical protein 1187 31.79 -1 1258359..1258553 + 64 71281209 - CPS_1226 - hypothetical protein 1188 27.91 -2 1258768..1258896 + 42 71280382 - CPS_1227 - hypothetical protein 1189 39.37 0 1258969..1261137 - 722 71282347 glcB CPS_1228 - malate synthase G 1190 40.39 0 1261760..1262482 - 240 71277771 - CPS_1229 - LrgB-like family protein 1191 37.53 0 1262482..1262862 - 126 71282590 - CPS_1230 - LrgA family protein 1192 39.24 0 1262869..1263816 - 315 71279562 - CPS_1231 - LysR family transcriptional regulator 1193 41.73 +1 1264150..1265733 + 527 71279542 icl CPS_1232 - isocitrate lyase 1194 36.68 0 1265937..1266743 - 268 71280459 - CPS_1233 - hypothetical protein 1195 38.61 0 1267037..1268116 - 359 71279693 - CPS_1234 - RND family efflux transporter MFP subunit 1196 40.63 0 1268113..1271553 - 1146 71282258 - CPS_1235 - AcrB/AcrD/AcrF family protein 1197 37.25 0 1271596..1271901 - 101 71278667 - CPS_1236 - ArsR family transcriptional regulator 1198 32.38 -1 1272072..1272281 + 69 71278286 - CPS_1237 - hypothetical protein 1199 41.09 0 1272323..1272670 + 115 71279861 - CPS_1238 - hypothetical protein 1200 40.61 0 1272721..1273380 + 219 71279312 - CPS_1239 - DsbA-like thioredoxin domain-containing protein 1201 39.75 0 1273535..1274797 - 420 71279638 lysA CPS_1240 - diaminopimelate decarboxylase 1202 33.33 -1 1274897..1275007 - 36 71280365 - CPS_1241 - hypothetical protein 1203 34.38 -1 1274970..1275065 + 31 71282540 - CPS_1242 - hypothetical protein 1204 38.10 0 1275068..1275592 - 174 71282157 - CPS_1243 - FMN reductase, NADPH-dependent 1205 39.34 0 1275785..1276666 + 293 71278724 - CPS_1244 - LysR family transcriptional regulator 1206 40.27 0 1276708..1277385 - 225 71278457 - CPS_1245 - hypothetical protein 1207 34.91 0 1277448..1277891 - 147 71279105 - CPS_1246 - putative lipoprotein 1208 39.71 0 1278299..1279192 + 297 71279614 - CPS_1247 - M23/37 family peptidase 1209 41.60 +1 1279205..1280353 - 382 71280531 - CPS_1248 - ABC transporter, permease protein 1210 40.64 0 1280353..1281324 - 323 71278096 - CPS_1249 - ABC transporter, ATP-binding protein 1211 44.07 +1 1281321..1282289 - 322 71279735 - CPS_1250 - hypothetical protein 1212 40.72 0 1282425..1282871 - 148 71279034 - CPS_1251 - Holliday junction resolvase-like protein 1213 40.57 0 1282974..1283678 - 234 71278931 - CPS_1252 - hypothetical protein 1214 38.94 0 1283691..1284653 - 320 71278064 gshB CPS_1253 - glutathione synthetase 1215 40.82 0 1284938..1285672 - 244 71280059 - CPS_1254 - hypothetical protein 1216 37.48 0 1285836..1286438 + 200 71281035 - CPS_1255 - hypothetical protein 1217 39.98 0 1286654..1287841 - 395 71280871 metK CPS_1256 - S-adenosylmethionine synthetase 1218 38.00 0 1288023..1288793 - 256 71280369 murI CPS_1257 - glutamate racemase 1219 39.50 0 1289047..1290375 + 442 71282158 - CPS_1258 - putative MFS transporter family protein 1220 34.16 -1 1290673..1291878 - 401 71279108 - CPS_1259 - putative sensor histidine kinase 1221 38.81 0 1292246..1292866 - 206 71280792 - CPS_1260 - putative nitrate/nitrite DNA-binding response regulator 1222 38.53 0 1292882..1294285 - 467 71282408 - CPS_1261 - sensor histidine kinase 1223 42.16 +1 1294309..1294512 + 67 71281849 - CPS_1262 - hypothetical protein 1224 39.39 0 1295571..1296611 + 346 71281682 - CPS_1263 - hypothetical protein 1225 38.97 0 1296642..1297706 + 354 71278630 - CPS_1264 - extracellular solute-binding protein 1226 38.43 0 1298064..1298612 + 182 71279030 - CPS_1265 - C4-dicarboxylate transporter family protein, DctQ subunit 1227 39.09 0 1298615..1300003 + 462 71280689 - CPS_1266 - putative C4-dicarboxylate transporter family protein, DctM subunit 1228 37.46 0 1300181..1301854 + 557 71282609 - CPS_1267 - methyl-accepting chemotaxis protein 1229 35.92 0 1302650..1302958 - 102 71282346 - CPS_1268 - hypothetical protein 1230 38.24 0 1303050..1303151 + 33 71280275 - CPS_1269 - hypothetical protein 1231 37.48 0 1303162..1303764 + 200 71280947 - CPS_1270 - hypothetical protein 1232 39.39 0 1303867..1305252 + 461 71281317 pepP CPS_1271 - Xaa-Pro aminopeptidase 1233 41.48 0 1305439..1306752 + 437 71279860 ubiH CPS_1272 - 2-octaprenyl-6-methoxyphenol hydroxylase 1234 42.59 +1 1306849..1308177 + 442 71278061 - CPS_1273 - monooxygenase family protein 1235 41.32 0 1308798..1309886 + 362 71282177 gcvT CPS_1274 - glycine cleavage system aminomethyltransferase T 1236 40.77 0 1310018..1310407 + 129 71280736 gcvH1 CPS_1275 - glycine cleavage system H protein 1237 41.30 0 1310695..1313592 + 965 71281092 gcvP1 CPS_1276 - glycine dehydrogenase 1238 35.04 0 1313828..1314646 + 272 71278518 - CPS_1277 - hypothetical protein 1239 30.88 -2 1314810..1316684 + 624 71278887 - CPS_1278 - putative lipoprotein 1240 35.04 0 1317459..1317809 + 116 71281865 - CPS_1279 - hypothetical protein 1241 34.09 -1 1317899..1318162 - 87 71282043 - CPS_1280 - putative lipoprotein 1242 39.68 0 1318228..1320135 - 635 71280773 - CPS_1281 - metallo-beta-lactamase family protien 1243 36.81 0 1320261..1321181 + 306 71281111 - CPS_1282 - LysR family transcriptional regulator 1244 44.75 +1 1321233..1322756 - 507 71279168 - CPS_1283 - hypothetical protein 1245 38.45 0 1323237..1324214 + 325 71279402 - CPS_1284 - metallo-beta-lactamase family protein 1246 39.01 0 1324417..1325490 + 357 71279959 - CPS_1285 - DJ-1/PfpI family protein 1247 39.23 0 1325821..1328721 + 966 71282331 - CPS_1286 - M16 family metallopeptidase 1248 40.88 0 1328843..1329478 - 211 71281987 - CPS_1287 - Ser/Thr protein phosphatase family protein 1249 34.69 0 1330142..1332199 - 685 71281214 - CPS_1288 - sensory box protein 1250 40.42 0 1332738..1333556 - 272 71280240 - CPS_1289 - ISCps2, transposase orfB 1251 39.39 0 1333601..1333897 - 98 71279135 - CPS_1290 - ISCps2, transposase orfA 1252 34.50 -1 1334049..1334903 - 284 71278453 - CPS_1291 - sensory box protein 1253 33.33 -1 1335032..1335139 + 35 71278602 - CPS_1292 - hypothetical protein 1254 29.52 -2 1335464..1335568 - 34 71277904 - CPS_1293 - hypothetical protein 1255 37.74 0 1335707..1336636 - 309 71282479 - CPS_1294 - hypothetical protein 1256 38.98 0 1336944..1337651 - 235 71280376 - CPS_1295 - hypothetical protein 1257 38.96 0 1337863..1338768 + 301 71280432 - CPS_1296 - LysR family transcriptional regulator 1258 31.27 -1 1338803..1339141 - 112 71282187 - CPS_1297 - hypothetical protein 1259 37.76 0 1339502..1339840 + 112 71281504 phnA CPS_1298 - alkylphosphonate utilization operon protein PhnA 1260 43.81 +1 1339837..1339941 - 34 71278954 - CPS_1299 - hypothetical protein 1261 40.15 0 1340024..1341094 - 356 71278974 - CPS_1300 - cobalamin synthesis protein/P47K family protein 1262 39.64 0 1341379..1341996 + 205 71279953 - CPS_1301 - hypothetical protein 1263 40.49 0 1342562..1344112 + 516 71278259 - CPS_1302 - putative helicase 1264 43.59 +1 1344169..1344285 - 38 71281586 - CPS_1303 - hypothetical protein 1265 39.49 0 1344350..1345567 + 405 71281583 - CPS_1304 - hypothetical protein 1266 38.46 0 1345640..1346185 - 181 71282042 - CPS_1305 - TetR family transcriptional regulator 1267 37.01 0 1346332..1346766 + 144 71280455 - CPS_1306 - hypothetical protein 1268 37.36 0 1346776..1347693 + 305 71280982 - CPS_1307 - hypothetical protein 1269 38.85 0 1347758..1348990 - 410 71280189 - CPS_1308 - endonuclease/exonuclease/phosphatase family protein 1270 36.96 0 1349035..1349172 - 45 71278140 - CPS_1309 - hypothetical protein 1271 32.34 -1 1349376..1350080 - 234 71281645 - CPS_1310 - hypothetical protein 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0