version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1119 39.05 0 1180982..1181086 - 34 71279811 - CPS_1158 - hypothetical protein 1120 34.31 -1 1181089..1181292 - 67 71280362 - CPS_1159 - DNA-binding protein 1121 33.57 -1 1181289..1181711 - 140 71280760 - CPS_1160 - hypothetical protein 1122 39.09 0 1182264..1183619 + 451 71281297 - CPS_1161 - putative lipoprotein 1123 39.00 0 1183704..1185572 - 622 71282530 btuB CPS_1162 - tonB-dependent vitamin B12 receptor 1124 38.19 0 1186061..1186945 - 294 71281717 - CPS_1163 - putative vitamin B12 transport protein BtuF 1125 39.32 0 1187027..1187644 - 205 71277835 cobO2 CPS_1164 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1126 42.05 +1 1187701..1188687 - 328 71279080 - CPS_1165 - putative vitamin B12 transport system permease protein BtuC 1127 38.39 0 1188680..1189510 - 276 71280150 - CPS_1166 - putative vitamin B12 transport ATP-binding protein BtuD 1128 37.24 0 1189958..1190443 + 161 71280681 bfr1 CPS_1167 - bacterioferritin, subunit 1 1129 33.76 -1 1190453..1190920 + 155 71281265 bfr2 CPS_1168 - bacterioferritin, subunit 2 1130 40.51 0 1190992..1191186 - 64 71281251 - CPS_1169 - bacterioferritin-associated ferredoxin 1131 38.81 0 1191506..1193569 - 687 71281901 pepO CPS_1170 - metalloendopeptidase PepO 1132 41.48 0 1193906..1195132 - 408 71282601 - CPS_1171 - hypothetical protein 1133 38.39 0 1195472..1196242 + 256 71278643 - CPS_1172 - class II aldolase/adducin domain-containing protein 1134 40.48 0 1196460..1197635 + 391 71281434 - CPS_1173 - mandelate racemase/muconate lactonizing enzyme family protein 1135 37.62 0 1197669..1198625 - 318 71279674 - CPS_1174 - hypothetical protein 1136 38.98 0 1198691..1199416 - 241 71278813 - CPS_1175 - short chain dehydrogenase/reductase family oxidoreductase 1137 32.91 -1 1199664..1200134 + 156 71281730 - CPS_1176 - hypothetical protein 1138 39.90 0 1200697..1202493 + 598 71282231 - CPS_1177 - acyl-CoA dehydrogenase family protein 1139 40.27 0 1202840..1204570 - 576 71278966 - CPS_1178 - hypothetical protein 1140 41.00 0 1204810..1205070 - 86 71279059 rpsT CPS_1179 - ribosomal protein S20 1141 39.97 0 1205405..1207000 + 531 71280021 mviN CPS_1180 - integral membrane protein MviN 1142 38.33 0 1207417..1208337 + 306 71278470 ribF CPS_1181 - riboflavin biosynthesis protein RibF 1143 40.46 0 1208450..1211311 + 953 71277791 ileS CPS_1182 - isoleucyl-tRNA synthetase 1144 37.75 0 1211442..1211984 + 180 71282159 lspA CPS_1183 - signal peptidase II 1145 37.84 0 1212065..1212508 + 147 71279280 fkbP CPS_1184 - FKBP-type peptidyl-prolyl cis-trans isomerase FkbP 1146 43.89 +1 1212677..1213396 + 239 71281363 - CPS_1185 - putative glycoprotease family protein 1147 38.33 0 1213435..1214115 + 226 71282630 - CPS_1186 - hypothetical protein 1148 39.37 0 1214160..1215086 + 308 71278549 - CPS_1187 - putative lipase 1149 26.26 -2 1215102..1215200 - 32 71281367 - CPS_1188 - hypothetical protein 1150 39.43 0 1215202..1216857 + 551 71277782 fadD1 CPS_1189 - long-chain-fatty-acid--CoA ligase 1151 29.27 -2 1216864..1216986 - 40 71281143 - CPS_1190 - hypothetical protein 1152 38.08 0 1216995..1217732 - 245 71279221 - CPS_1191 - short chain dehydrogenase 1153 41.87 +1 1217993..1220593 + 866 71282572 - CPS_1192 - hypothetical protein 1154 36.57 0 1220779..1221828 + 349 71278653 sohB CPS_1193 - putative periplasmic protease 1155 39.43 0 1221977..1223320 - 447 71279376 - CPS_1194 - putative proton/glutamate symporter 1156 40.92 0 1223606..1226242 + 878 71279739 - CPS_1195 - intimin/invasin family protein 1157 38.66 0 1226297..1227403 - 368 71280474 - CPS_1196 - arginase family protein 1158 41.63 +1 1227821..1230520 + 899 71281029 topA CPS_1197 - DNA topoisomerase I 1159 39.02 0 1230624..1230992 - 122 71278095 - CPS_1198 - hypothetical protein 1160 33.46 -1 1231051..1231821 - 256 71282321 - CPS_1199 - hypothetical protein 1161 38.67 0 1232099..1233073 + 324 71282599 cysB CPS_1200 - transcriptional regulator CysB 1162 39.43 0 1233150..1233395 - 81 71280940 - CPS_1201 - ferredoxin, 4Fe-4S 1163 38.94 0 1233435..1234826 - 463 71281199 yegQ CPS_1202 - U32 family peptidase 1164 34.28 -1 1235097..1235939 + 280 71278751 - CPS_1203 - hypothetical protein 1165 36.04 0 1236024..1236947 - 307 71282036 rdgC CPS_1204 - recombination associated protein 1166 34.71 0 1237281..1239023 - 580 71278390 - CPS_1205 - sensor histidine kinase 1167 35.78 0 1239412..1240434 + 340 71278969 - CPS_1206 - putative outer membrane porin 1168 33.33 -1 1240752..1240892 - 46 71280708 - CPS_1207 - hypothetical protein 1169 37.75 0 1240979..1241680 + 233 71282474 phoB CPS_1208 - phosphate regulon response regulator PhoB 1170 37.93 0 1241719..1243023 + 434 71279283 phoR CPS_1209 - phosphate regulon sensor protein PhoR 1171 37.19 0 1243168..1244127 + 319 71281115 - CPS_1210 - putative phosphate ABC transporter, periplasmic phosphate-binding protein 1172 40.32 0 1244343..1245272 + 309 71277944 ispH CPS_1211 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1173 27.45 -2 1245325..1245426 + 33 71279663 - CPS_1212 - hypothetical protein 1174 44.67 +1 1245807..1246388 + 193 71281505 pilV CPS_1213 - type IV pilus modification protein PilV 1175 41.38 0 1246661..1247629 + 322 71281995 - CPS_1214 - hypothetical protein 1176 38.43 0 1247634..1248182 + 182 71278763 - CPS_1215 - hypothetical protein 1177 40.37 0 1248219..1251986 + 1255 71279463 - CPS_1216 - hypothetical protein 1178 39.20 0 1251986..1252411 + 141 71280185 pilE CPS_1217 - type IV pilus biogenesis protein PilE 1179 34.48 -1 1252414..1252761 + 115 71280255 - CPS_1218 - hypothetical protein 1180 39.78 0 1252900..1253442 - 180 71281725 - CPS_1219 - putative type IV pilus biogenesis protein 1181 27.19 -2 1253480..1253593 + 37 71280571 - CPS_1220 - hypothetical protein 1182 38.10 0 1253678..1254853 - 391 71278851 pheA CPS_1221 - chorismate mutase/prephenate dehydratase 1183 38.76 0 1254961..1255347 - 128 71281908 - CPS_1222 - hypothetical protein 1184 39.42 0 1255400..1257832 - 810 71277793 - CPS_1223 - penicillin amidase family protein 1185 44.17 +1 1257949..1258068 + 39 71279871 - CPS_1224 - hypothetical protein 1186 31.25 -1 1258085..1258516 - 143 71278758 - CPS_1225 - hypothetical protein 1187 31.79 -1 1258359..1258553 + 64 71281209 - CPS_1226 - hypothetical protein 1188 27.91 -2 1258768..1258896 + 42 71280382 - CPS_1227 - hypothetical protein 1189 39.37 0 1258969..1261137 - 722 71282347 glcB CPS_1228 - malate synthase G 1190 40.39 0 1261760..1262482 - 240 71277771 - CPS_1229 - LrgB-like family protein 1191 37.53 0 1262482..1262862 - 126 71282590 - CPS_1230 - LrgA family protein 1192 39.24 0 1262869..1263816 - 315 71279562 - CPS_1231 - LysR family transcriptional regulator 1193 41.73 +1 1264150..1265733 + 527 71279542 icl CPS_1232 - isocitrate lyase 1194 36.68 0 1265937..1266743 - 268 71280459 - CPS_1233 - hypothetical protein 1195 38.61 0 1267037..1268116 - 359 71279693 - CPS_1234 - RND family efflux transporter MFP subunit 1196 40.63 0 1268113..1271553 - 1146 71282258 - CPS_1235 - AcrB/AcrD/AcrF family protein 1197 37.25 0 1271596..1271901 - 101 71278667 - CPS_1236 - ArsR family transcriptional regulator 1198 32.38 -1 1272072..1272281 + 69 71278286 - CPS_1237 - hypothetical protein 1199 41.09 0 1272323..1272670 + 115 71279861 - CPS_1238 - hypothetical protein 1200 40.61 0 1272721..1273380 + 219 71279312 - CPS_1239 - DsbA-like thioredoxin domain-containing protein 1201 39.75 0 1273535..1274797 - 420 71279638 lysA CPS_1240 - diaminopimelate decarboxylase 1202 33.33 -1 1274897..1275007 - 36 71280365 - CPS_1241 - hypothetical protein 1203 34.38 -1 1274970..1275065 + 31 71282540 - CPS_1242 - hypothetical protein 1204 38.10 0 1275068..1275592 - 174 71282157 - CPS_1243 - FMN reductase, NADPH-dependent 1205 39.34 0 1275785..1276666 + 293 71278724 - CPS_1244 - LysR family transcriptional regulator 1206 40.27 0 1276708..1277385 - 225 71278457 - CPS_1245 - hypothetical protein 1207 34.91 0 1277448..1277891 - 147 71279105 - CPS_1246 - putative lipoprotein 1208 39.71 0 1278299..1279192 + 297 71279614 - CPS_1247 - M23/37 family peptidase 1209 41.60 +1 1279205..1280353 - 382 71280531 - CPS_1248 - ABC transporter, permease protein 1210 40.64 0 1280353..1281324 - 323 71278096 - CPS_1249 - ABC transporter, ATP-binding protein 1211 44.07 +1 1281321..1282289 - 322 71279735 - CPS_1250 - hypothetical protein 1212 40.72 0 1282425..1282871 - 148 71279034 - CPS_1251 - Holliday junction resolvase-like protein 1213 40.57 0 1282974..1283678 - 234 71278931 - CPS_1252 - hypothetical protein 1214 38.94 0 1283691..1284653 - 320 71278064 gshB CPS_1253 - glutathione synthetase 1215 40.82 0 1284938..1285672 - 244 71280059 - CPS_1254 - hypothetical protein 1216 37.48 0 1285836..1286438 + 200 71281035 - CPS_1255 - hypothetical protein 1217 39.98 0 1286654..1287841 - 395 71280871 metK CPS_1256 - S-adenosylmethionine synthetase 1218 38.00 0 1288023..1288793 - 256 71280369 murI CPS_1257 - glutamate racemase 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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