version 1.0
Colwellia psychrerythraea 34H, complete genome - 1..5373180 4910 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1010 39.43 0 1074305..1074583 + 92 71278604 oadG CPS_1048 - oxaloacetate decarboxylase, gamma subunit 1011 40.87 0 1074649..1076427 + 592 71280675 oadA CPS_1049 - pyruvate carboxylase subunit B 1012 40.21 0 1076436..1077569 + 377 71280130 oadB CPS_1050 - oxaloacetate decarboxylase, beta subunit 1013 34.92 0 1077645..1077770 + 41 71280647 - CPS_1051 - hypothetical protein 1014 41.45 0 1078012..1078824 + 270 71279962 - CPS_1052 - M48 family peptidase 1015 39.45 0 1078913..1079566 - 217 71281994 pdxH CPS_1053 - pyridoxamine 5'-phosphate oxidase 1016 37.56 0 1079677..1079889 - 70 71281316 - CPS_1054 - hypothetical protein 1017 39.80 0 1080485..1081072 - 195 71278465 napC CPS_1055 - cytochrome c-type protein NapC 1018 38.29 0 1081081..1081584 - 167 71277776 napB CPS_1056 - periplasmic nitrate reductase, cytochrome c-type subunit 1019 40.70 0 1081594..1084092 - 832 71279873 napA CPS_1057 - nitrate reductase 1020 37.74 0 1084149..1084466 - 105 71279163 napD CPS_1058 - napD protein 1021 35.52 0 1084486..1085034 - 182 71281481 napF CPS_1059 - ferredoxin-type protein NapF 1022 38.27 0 1085039..1085200 - 53 71281582 napE CPS_1060 - napE protein 1023 38.11 0 1085515..1087689 + 724 71281055 - CPS_1061 - hypothetical protein 1024 35.96 0 1087729..1087956 - 75 71278964 - CPS_1062 - hypothetical protein 1025 37.14 0 1087934..1088038 - 34 71278263 - CPS_1063 - hypothetical protein 1026 34.50 -1 1087947..1088204 - 85 71279936 - CPS_1064 - hypothetical protein 1027 40.00 0 1088472..1088606 - 44 71279385 - CPS_1065 - hypothetical protein 1028 37.64 0 1088634..1089515 + 293 71280976 - CPS_1066 - ABC transporter, ATP-binding protein 1029 37.43 0 1089548..1090573 + 341 71280463 - CPS_1067 - putative ABC transporter, permease protein 1030 38.25 0 1090765..1091883 + 372 71278947 - CPS_1068 - 3-oxoacyl-(acyl carrier protein) synthase III 1031 40.09 0 1091926..1092576 + 216 71278073 - CPS_1069 - hypothetical protein 1032 33.33 -1 1092543..1092713 + 56 71280877 - CPS_1070 - hypothetical protein 1033 34.33 -1 1092646..1092945 + 99 71280348 - CPS_1071 - septum formation initiator family protein 1034 39.21 0 1092969..1093700 + 243 71281808 ispD CPS_1072 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1035 40.55 0 1093771..1094283 + 170 71281605 ispF CPS_1073 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1036 39.95 0 1094340..1095443 + 367 71278765 - CPS_1074 - hypothetical protein 1037 40.61 0 1095447..1096229 + 260 71278059 surE CPS_1075 - acid phosphatase SurE 1038 43.78 +1 1096248..1096898 + 216 71280136 pcm CPS_1076 - protein-L-isoaspartate O-methyltransferase 1039 41.80 +1 1096898..1097476 + 192 71279573 - CPS_1077 - DedA family membrane protein 1040 36.15 0 1097561..1098412 + 283 71277883 - CPS_1078 - putative lipoprotein NlpD 1041 38.27 0 1098522..1099412 + 296 71278347 rpoS CPS_1079 - RNA polymerase sigma factor RpoS 1042 41.70 +1 1099928..1101265 + 445 71279370 nqrA CPS_1080 - Na(+)-translocating NADH-quinone reductase subunit A 1043 41.31 0 1101268..1102470 + 400 71279883 nqrB CPS_1081 - Na(+)-translocating NADH-quinone reductase subunit B 1044 38.91 0 1102463..1103233 + 256 71278488 nqrC CPS_1082 - Na(+)-translocating NADH-quinone reductase subunit C 1045 37.66 0 1103233..1103856 + 207 71282119 nqrD CPS_1083 - Na(+)-translocating NADH-quinone reductase subunit D 1046 38.46 0 1103859..1104482 + 207 71282541 nqrE CPS_1084 - Na(+)-translocating NADH-quinone reductase subunit E 1047 40.20 0 1104545..1105768 + 407 71281144 nqrF CPS_1085 - Na(+)-translocating NADH-quinone reductase subunit F 1048 40.12 0 1106014..1107045 + 343 71278788 apbE CPS_1086 - thiamin biosynthesis lipoprotein ApbE 1049 39.39 0 1107179..1107409 + 76 71278094 - CPS_1087 - hypothetical protein 1050 39.30 0 1107564..1109456 - 630 71282210 dxs CPS_1088 - 1-deoxy-D-xylulose-5-phosphate synthase 1051 40.75 0 1109511..1110413 - 300 71278749 ispA CPS_1089 - geranyltranstransferase 1052 36.95 0 1110413..1110661 - 82 71278087 xseB CPS_1090 - exodeoxyribonuclease VII, small subunit 1053 36.19 0 1110938..1111042 - 34 71280170 - CPS_1091 - hypothetical protein 1054 39.87 0 1111247..1112011 + 254 71279500 - CPS_1092 - flagellar motor protein PomA 1055 41.48 0 1112056..1113000 + 314 71280941 motB CPS_1093 - flagellar motor protein MotB 1056 36.15 0 1113274..1114728 + 484 71280272 thiI CPS_1094 - thiamine biosynthesis protein ThiI 1057 38.66 0 1114738..1115676 - 312 71278126 panE CPS_1095 - 2-dehydropantoate 2-reductase 1058 38.36 0 1115775..1116152 - 125 71278950 - CPS_1096 - hypothetical protein 1059 31.06 -1 1116166..1116297 - 43 71279968 - CPS_1097 - hypothetical protein 1060 38.30 0 1116355..1116837 + 160 71278314 - CPS_1098 - nucleotide-binding protein 1061 37.39 0 1117011..1117775 + 254 71278550 - CPS_1099 - hypothetical protein 1062 35.76 0 1118313..1119260 + 315 71281871 metA CPS_1100 - homoserine O-succinyltransferase 1063 40.10 0 1119355..1123047 + 1230 71282306 metH CPS_1101 - B12-dependent methionine synthase 1064 32.38 -1 1123175..1123279 + 34 71280251 - CPS_1102 - hypothetical protein 1065 35.12 0 1123267..1123602 - 111 71280910 yfiA1 CPS_1103 - ribosomal subunit interface protein 1066 38.20 0 1123943..1126201 - 752 71279274 - CPS_1104 - dipeptidyl peptidase IV 1067 41.11 0 1126450..1127838 - 462 71281385 - CPS_1105 - DNA repair protein RadA 1068 35.72 0 1128134..1130602 + 822 71279593 - CPS_1106 - hypothetical protein 1069 40.39 0 1130762..1131682 - 306 71278256 serB CPS_1107 - phosphoserine phosphatase 1070 38.82 0 1131875..1132567 + 230 71278629 - CPS_1108 - hypothetical protein 1071 39.53 0 1132578..1133480 - 300 71281630 - CPS_1109 - TatD family hydrolase 1072 39.39 0 1133766..1135514 - 582 71282384 argS CPS_1110 - arginyl-tRNA synthetase 1073 39.85 0 1135852..1137432 - 526 71281408 prfC CPS_1111 - peptide chain release factor 3 1074 35.90 0 1137464..1137619 + 51 71280327 - CPS_1112 - hypothetical protein 1075 36.55 0 1137750..1137998 - 82 71279355 - CPS_1113 - hypothetical protein 1076 38.46 0 1138189..1138695 - 168 71279741 rimI CPS_1114 - ribosomal-protein-alanine acetyltransferase 1077 37.83 0 1138709..1139086 - 125 71280440 - CPS_1115 - hypothetical protein 1078 32.26 -1 1139539..1139631 + 30 71280845 - CPS_1117 - hypothetical protein 1079 36.78 0 1139645..1141414 - 589 71281541 aceK CPS_1118 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 1080 40.65 0 1141665..1142744 + 359 71281922 queA CPS_1119 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1081 41.02 0 1142819..1143976 + 385 71278113 tgt CPS_1120 - queuine tRNA-ribosyltransferase 1082 39.88 0 1144168..1144503 + 111 71281167 yajC CPS_1121 - preprotein translocase subunit YajC 1083 39.50 0 1144707..1146554 + 615 71282618 secD CPS_1122 - preprotein translocase subunit SecD 1084 36.92 0 1146575..1147522 + 315 71281229 secF CPS_1123 - preprotein translocase subunit SecF 1085 38.71 0 1147600..1147785 - 61 71279160 - CPS_1124 - hypothetical protein 1086 40.19 0 1147766..1149166 + 466 71279831 - CPS_1125 - DEAD-box ATP dependent DNA helicase 1087 42.93 +1 1149302..1150093 - 263 71277882 cobA1 CPS_1126 - uroporphyrin-III C-methyltransferase 1088 39.02 0 1150177..1150299 + 40 71279367 - CPS_1127 - hypothetical protein 1089 39.18 0 1150276..1151079 - 267 71281075 suhB CPS_1128 - inositol-1-monophosphatase 1090 38.69 0 1151668..1152489 + 273 71281163 - CPS_1129 - RNA methyltransferase 1091 41.60 +1 1152528..1153337 + 269 71281877 cysE CPS_1130 - serine O-acetyltransferase 1092 40.24 0 1153622..1154128 + 168 71278574 - CPS_1131 - Rrf2 family protein 1093 39.01 0 1154177..1155391 + 404 71278598 iscS CPS_1132 - cysteine desulfurase 1094 38.02 0 1155494..1155877 + 127 71278981 iscU CPS_1133 - scaffold protein 1095 40.43 0 1155889..1156212 + 107 71280094 - CPS_1134 - iron-sulfur cluster assembly protein 1096 36.55 0 1156396..1156923 + 175 71282522 hscB CPS_1135 - co-chaperone HscB 1097 40.63 0 1157013..1158875 + 620 71281967 hscA CPS_1136 - chaperone protein HscA 1098 39.23 0 1158944..1159282 + 112 71281441 - CPS_1137 - ferredoxin, 2Fe-2S 1099 37.88 0 1159702..1161615 + 637 71281070 - CPS_1138 - GGDEF/EAL domain-containing protein 1100 34.48 -1 1162017..1164362 + 781 71278615 - CPS_1139 - GGDEF/GAF/EAL domain-containing protein 1101 27.91 -2 1164512..1164640 - 42 71277931 - CPS_1140 - hypothetical protein 1102 36.27 0 1164637..1164738 - 33 71282543 - CPS_1141 - hypothetical protein 1103 39.23 0 1164782..1165816 - 344 71281824 cobC CPS_1142 - cobC protein 1104 40.58 0 1165886..1166920 - 344 71281460 - CPS_1143 - putative cobalamin biosynthesis protein D 1105 37.63 0 1167014..1167595 - 193 71281188 - CPS_1144 - phosphoglycerate mutase family protein 1106 44.09 +1 1167816..1167908 - 30 71280309 - CPS_1145 - hypothetical protein 1107 37.94 0 1168297..1168926 + 209 71282548 - CPS_1146 - hypothetical protein 1108 42.62 +1 1169061..1170395 + 444 71281694 cobB CPS_1147 - cobyrinic acid a,c-diamide synthase 1109 38.89 0 1170819..1171466 + 215 71281755 cobO1 CPS_1148 - cob(I)yrinic acid a,c-diamide adenosyltransferase 38.03 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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