version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 633 31.03 0 794912..795910 + 332 18309615 trpS CPE0633 - tryptophanyl-tRNA synthetase 634 21.85 -2 796572..797111 + 179 18309616 - CPE0634 - hypothetical protein 635 29.74 0 797206..798318 + 370 18309617 - CPE0635 - anaerobic sulfatase-maturase 636 33.81 +1 798746..799576 + 276 18309618 - CPE0636 - phosphate ABC transporter phosphate-binding protein 637 32.48 0 799800..800618 + 272 18309619 - CPE0637 - phosphate ABC transporter phosphate-binding protein 638 32.77 +1 800700..801587 + 295 18309620 - CPE0638 - phosphate ABC transporter permease 639 31.64 0 801590..802414 + 274 18309621 - CPE0639 - phosphate ABC transporter permease 640 31.50 0 802432..803193 + 253 18309622 - CPE0640 - phosphate ABC transporter ATP-binding protein 641 27.06 0 803218..803871 + 217 18309623 phoU CPE0641 - phosphate transporter PhoU 642 27.73 0 804031..804726 + 231 18309624 - CPE0642 - DNA-binding response regulator 643 27.08 0 804897..805520 - 207 18309625 - CPE0643 - hypothetical protein 644 34.29 +1 805554..805970 - 138 18309626 flaV CPE0644 - flavodoxin 645 31.53 0 806384..808042 - 552 18309627 gltX CPE0645 - glutaminyl-tRNA synthetase 646 32.05 0 808295..808450 - 51 18309628 - CPE0646 - hypothetical protein 647 25.90 0 808605..809693 - 362 18309629 - CPE0647 - hypothetical protein 648 30.03 0 809789..811210 + 473 18309630 gerKA CPE0648 - spore germination protein KA 649 28.00 0 811185..812309 + 374 18309631 gerBC CPE0649 - spore germination protein B3 650 26.90 0 812504..813637 + 377 18309632 - CPE0650 - AAA domain family protein 651 25.36 -1 813713..814126 + 137 18309633 - CPE0651 - hypothetical protein 652 32.92 +1 814422..815642 + 406 18309634 tyrS CPE0652 - tyrosyl-tRNA synthetase 653 30.16 0 816062..816754 + 230 18309635 - CPE0653 - Ser/Thr protein phosphatase family protein 654 28.79 0 816873..817664 + 263 18309636 relA CPE0654 - relA/spoT family protein 655 28.50 0 817937..818722 + 261 18309637 - CPE0655 - hypothetical protein 656 29.39 0 818840..819955 + 371 18309638 - CPE0656 - hypothetical protein 657 28.85 0 819969..821306 + 445 18309639 - CPE0657 - hypothetical protein 658 24.35 -1 821464..822855 + 463 18309640 - CPE0658 - hypothetical protein 659 31.46 0 823205..824698 + 497 18309641 - CPE0659 - hypothetical protein 660 28.10 0 824764..825528 + 254 18309642 - CPE0660 - 4Fe-4S binding domain protein/radical SAM domain protein 661 24.03 -1 825828..826343 + 171 18309643 - CPE0661 - hypothetical protein 662 27.74 0 826452..827255 - 267 18309644 - CPE0662 - hypothetical protein 663 24.87 -1 827578..828888 - 436 18309645 - CPE0663 - F5/8 type C domain protein 664 34.20 +1 829607..829951 - 114 18309646 - CPE0664 - hypothetical protein 665 28.42 0 830406..831137 + 243 18309647 - CPE0665 - hypothetical protein 666 28.57 0 831185..831457 + 90 18309648 - CPE0666 - transposase 667 31.64 0 831468..831821 + 117 18309649 - CPE0667 - transposase 668 29.85 0 831763..832623 + 286 18309650 - CPE0668 - transposase 669 25.20 -1 832865..833872 + 335 18309651 - CPE0669 - hypothetical protein 670 33.41 +1 834018..836468 - 816 18309652 leuS CPE0670 - leucyl-tRNA synthetase 671 27.81 0 837243..837803 - 186 18309653 - CPE0671 - hypothetical protein 672 23.97 -1 838095..838457 + 120 18309654 - CPE0672 - hypothetical protein 673 30.80 0 838662..839648 + 328 18309655 birA CPE0673 - bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase 674 24.40 -1 839807..840892 + 361 18309656 - CPE0674 - HRDC domain protein 675 16.67 -2 840894..841061 + 55 18309657 - CPE0675 - hypothetical protein 676 26.94 0 841162..841896 + 244 18309658 - CPE0676 - hypothetical protein 677 23.86 -1 842086..842391 + 101 18309659 - CPE0677 - hypothetical protein 678 29.34 0 842638..843288 + 216 18309660 dut CPE0678 - deoxyuridine 5`-triphosphate nucleotidohydrolase 679 31.58 0 843791..845101 + 436 18309661 thiC CPE0679 - thiamine biosynthesis protein ThiC 680 31.86 0 845339..849139 + 1266 18309662 purL CPE0680 - phosphoribosylformylglycinamidine synthase 681 33.54 +1 849450..849929 + 159 18309663 purE CPE0681 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 682 28.95 0 849929..850636 + 235 18309664 purC CPE0682 - phosphoribosylaminoimidazole-succinocarboxamide synthase 683 34.23 +1 850658..852103 + 481 18309665 purF CPE0683 - amidophosphoribosyltransferase 684 31.64 0 852104..853105 + 333 18309666 purM CPE0684 - phosphoribosylaminoimidazole synthetase 685 30.08 0 853093..853707 + 204 18309667 purN CPE0685 - phosphoribosylglycinamide formyltransferase 686 30.94 0 853720..855225 + 501 18309668 purH CPE0686 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 687 30.63 0 855632..856591 + 319 18309669 purD CPE0687 - phosphoribosylamine-glycine ligase 688 31.68 0 857504..857866 + 120 18309670 - CPE0688 - hypothetical protein 689 34.62 +1 858399..858941 + 180 18309671 - CPE0689 - hypothetical protein 690 28.34 0 859074..860474 - 466 18309672 argH CPE0690 - argininosuccinate lyase 691 29.80 0 860568..861785 - 405 18309673 argG CPE0691 - argininosuccinate synthase 692 31.79 0 862390..863037 + 215 18309674 - CPE0692 - putative translaldolase 693 32.23 0 863437..868497 + 1686 18309675 - CPE0693 - hypothetical protein 694 34.71 +1 868969..869982 + 337 18309676 - CPE0694 - 3-deoxy-7-phosphoheptulonate synthase 695 28.58 0 870079..871131 + 350 18309677 aroB CPE0695 - 3-dehydroquinate synthase 696 28.63 0 871378..872652 + 424 18309678 aroA CPE0696 - 3-phosphoshikimate 1-carboxyvinyltransferase 697 32.31 0 872716..873789 + 357 161485643 aroC CPE0697 - chorismate synthase 698 27.21 0 873958..874251 + 97 18309680 - CPE0698 - chorismate mutase 699 18.95 -2 874579..874731 + 50 18309681 - CPE0699 - hypothetical protein 700 28.80 0 875075..875890 + 271 18309682 aroE CPE0700 - shikimate 5-dehydrogenase 701 30.43 0 876144..876659 + 171 18309683 aroK CPE0701 - shikimate kinase 702 29.48 0 876855..877295 + 146 18309684 aroQ CPE0702 - 3-dehydroquinate dehydratase 703 23.64 -1 877378..877893 + 171 18309685 - CPE0703 - hypothetical protein 704 27.93 0 878020..878352 + 110 18309686 - CPE0704 - 30S ribosomal protein 705 23.89 -1 878354..879211 + 285 18309687 - CPE0705 - hypothetical protein 706 22.54 -1 879423..880265 + 280 18309688 - CPE0706 - hypothetical protein 707 29.74 0 880391..881281 + 296 18309689 - CPE0707 - ABC transporter 708 28.22 0 881283..882494 + 403 18309690 - CPE0708 - hypothetical protein 709 27.47 0 882605..883594 + 329 18309691 cbh CPE0709 - choloylglycine hydrolase 710 32.51 0 884390..884872 + 160 18309692 - CPE0710 - AsnC family transcriptional regulator 711 33.59 +1 884869..886047 + 392 18309693 aspC CPE0711 - aspartate aminotransferase 712 27.00 0 886162..887187 + 341 18309694 - CPE0712 - hypothetical protein 713 20.43 -2 887244..887708 - 154 18309695 - CPE0713 - hypothetical protein 714 27.30 0 887767..888909 - 380 18309696 - CPE0714 - hypothetical protein 715 26.36 0 889388..889903 + 171 18309697 - CPE0715 - GNAT family acetyltransferase 716 27.94 0 890124..890642 + 172 18309698 sigW CPE0716 - RNA polymerase ECF-type sigma factor 717 26.11 0 890718..892130 + 470 18309699 - CPE0717 - hypothetical protein 718 28.43 0 892351..893553 + 400 18309700 - CPE0718 - DHHA1 domain protein 719 25.67 0 893608..894612 + 334 18309701 - CPE0719 - capsular polysaccharide biosynthesis protein 720 29.34 0 894764..895939 + 391 18309702 - CPE0720 - hypothetical protein 721 31.59 0 896376..897233 + 285 18309703 - CPE0721 - zinc transporter ZupT 722 27.45 0 897523..898185 + 220 18309704 - CPE0722 - DeoR family transcriptional regulator 723 28.64 0 898316..899104 + 262 18309705 - CPE0723 - HAD hydrolase, IIB family 724 27.02 0 899303..900331 + 342 18309706 splB CPE0724 - spore photoproduct lyase 725 28.63 0 900997..903081 + 694 18309707 nanI CPE0725 - exo-alpha-sialidase 726 30.65 0 903129..904283 + 384 18309708 - CPE0726 - hypothetical protein 727 29.00 0 904693..905499 + 268 18309709 - CPE0727 - hypothetical protein 728 31.18 0 905664..905942 + 92 18309710 - CPE0728 - hypothetical protein 729 29.94 0 905890..906390 + 166 18309711 - CPE0729 - hypothetical protein 730 25.16 -1 906584..907048 + 154 18309712 - CPE0730 - hypothetical protein 731 25.42 -1 907404..907580 + 58 18309713 - CPE0731 - hypothetical protein 732 33.16 +1 907833..908408 + 191 18309714 - CPE0732 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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