version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 14 32.32 0 21268..22545 + 425 161485645 serS CPE0014 - seryl-tRNA synthetase 15 29.05 0 22722..23141 + 139 18308997 - CPE0015 - hypothetical protein 16 27.72 0 23757..24023 + 88 18308998 - CPE0016 - hypothetical protein 17 22.40 -1 24353..24535 - 60 18308999 - CPE0017 - hypothetical protein 18 26.53 0 24773..25654 + 293 18309000 - CPE0018 - hypothetical protein 19 31.52 0 25743..25907 - 54 18309001 - CPE0019 - hypothetical protein 20 28.16 0 26116..29592 + 1158 18309002 addB CPE0020 - ATP-dependent deoxyribonuclease chain B 21 29.05 0 29582..33388 + 1268 18309003 addA CPE0021 - ATP-dependent deoxyribonuclease chain A 22 25.80 0 33646..34920 - 424 18309004 papS CPE0022 - polyA polymerase family protein 23 30.21 0 35030..36022 + 330 18309005 - CPE0023 - CMP-binding factor 24 26.70 0 36054..37214 - 386 18309006 - CPE0024 - ErfK/YbiS/YcfS/YnhG family protein 25 30.96 0 37407..38627 + 406 18309007 pepT CPE0025 - peptidase T 26 30.37 0 38733..39608 - 291 18309008 - CPE0026 - degV family protein 27 24.56 -1 40045..41184 + 379 18309009 - CPE0027 - hypothetical protein 28 28.02 0 41300..42184 - 294 18309010 psdD CPE0028 - phosphatidylserine decarboxylase 29 25.79 0 42348..42917 + 189 18309011 - CPE0029 - TetR family transcriptional regulator 30 30.17 0 43192..44457 + 421 18309012 hlyA CPE0030 - hemolysin-related protein 31 34.26 +1 44460..44891 + 143 18309013 - CPE0031 - cytidine/deoxycytidylate deaminase family protein 32 27.23 0 44954..45412 + 152 18309014 - CPE0032 - hypothetical protein 33 21.31 -2 45536..45901 + 121 18309015 - CPE0033 - hypothetical protein 34 35.14 +1 46011..46673 + 220 18309016 - CPE0034 - hypothetical protein 35 31.77 0 46787..48259 - 490 18309017 yplC CPE0035 - hypothetical protein 36 33.17 +1 48590..49786 + 398 18309018 plc CPE0036 - phospholipase C 37 27.40 0 49974..50900 + 308 18309019 cobW CPE0037 - CobW/P47K family protein 38 26.67 0 50920..51504 + 194 18309020 - CPE0038 - hypothetical protein 39 29.42 0 51507..52400 + 297 18309021 - CPE0039 - hypothetical protein 40 25.00 -1 52413..53132 + 239 18309022 - CPE0040 - hypothetical protein 41 29.66 0 53398..54186 + 262 18309023 - CPE0041 - prolipoprotein diacylglyceryl transferase 42 27.58 0 54959..55462 + 167 18309024 - CPE0042 - putative lipoprotein 43 29.99 0 55899..57185 + 428 18309025 brnQ CPE0043 - branched chain amino acid ABC transporter carrier protein 44 22.63 -1 57339..57824 - 161 18309026 folA CPE0044 - dihydrofolate reductase 45 30.35 0 58015..59658 + 547 18309027 dnaX CPE0045 - DNA polymerase III subunits gamma and tau 46 38.35 +2 59770..60108 + 112 18309028 - CPE0046 - hypothetical protein 47 32.50 0 60206..60802 + 198 18309029 recR CPE0047 - recombination protein RecR 48 25.45 -1 61028..61306 + 92 18309030 - CPE0048 - hypothetical protein 49 27.60 0 61322..61600 + 92 18309031 - CPE0049 - hypothetical protein 50 23.25 -1 61875..63005 + 376 18309032 - CPE0050 - hypothetical protein 51 30.00 0 63169..63348 + 59 18309033 - CPE0051 - hypothetical protein 52 30.05 0 63417..63599 + 60 18309034 - CPE0052 - hypothetical protein 53 29.99 0 63763..64839 + 358 18309035 - CPE0053 - aminotransferase, class V 54 28.26 0 64908..65813 + 301 18309036 serA CPE0054 - putative D-3-phosphoglycerate dehydrogenase 55 26.89 0 65960..67216 + 418 18309037 - CPE0055 - hypothetical protein 56 34.34 +1 67272..67967 - 231 18309038 mtn CPE0056 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 57 31.36 0 68347..69108 + 253 18309039 - CPE0057 - HesA/MoeB/ThiF family protein 58 29.56 0 69399..70565 + 388 18309040 - CPE0058 - hypothetical protein 59 26.30 0 70590..71528 + 312 18309041 - CPE0059 - GNAT family acetyltransferase 60 29.40 0 71545..72231 + 228 18309042 dgk2 CPE0060 - deoxyguanosine kinase 61 31.90 0 78534..79856 + 440 18309043 - CPE0061 - integral membrane transport protein 62 21.33 -2 79983..80132 + 49 18309044 - CPE0062 - hypothetical protein 63 28.69 0 80480..82504 + 674 18309045 glgB CPE0063 - glycogen branching enzyme 64 29.54 0 82532..83980 + 482 18309046 glgA CPE0064 - glycogen synthase 65 30.46 0 84010..86445 + 811 18309047 glgP CPE0065 - glycogen phosphorylase 66 28.61 0 86541..88361 + 606 18309048 - CPE0066 - amylopullulanase 67 28.83 0 88416..88859 + 147 18309049 - CPE0067 - hypothetical protein 68 30.03 0 89069..90250 + 393 18309050 glgC CPE0068 - glucose-1-phosphate adenylyltransferase 69 26.11 0 90280..91386 + 368 18309051 glgD CPE0069 - glycogen biosynthesis protein 70 26.62 0 91449..91895 + 148 18309052 - CPE0070 - phosphotransbutyrylase 71 26.96 0 92062..93504 - 480 18309053 clsA CPE0071 - cardiolipin synthase 72 34.17 +1 93936..95492 + 518 18309054 - CPE0072 - hypothetical protein 73 26.32 0 101425..102009 + 194 18309055 - CPE0073 - transcription antiterminator 74 27.51 0 101897..102274 + 125 18309056 - CPE0074 - transcription antiterminator 75 35.66 +1 102497..102754 - 85 18309057 - CPE0075 - hypothetical protein 76 33.09 +1 103447..104664 + 405 18309058 - CPE0076 - PTS system, N-acetylglucosamine-specific IIBC component 77 28.49 0 104712..104897 + 61 18309059 - CPE0077 - hypothetical protein 78 23.31 -1 104966..105484 - 172 18309060 - CPE0078 - TetR family transcriptional regulator 79 30.80 0 111585..113675 + 696 18309061 fus CPE0079 - elongation factor G 80 24.05 -1 114098..114334 + 78 18309062 - CPE0080 - hypothetical protein 81 35.55 +1 114586..115533 + 315 18309063 glcK CPE0081 - glucose kinase 82 37.57 +2 116074..116616 + 180 18309064 - CPE0082 - hypothetical protein 83 26.60 0 116949..117572 + 207 18309065 gpmA CPE0083 - phosphoglycerate mutase family protein 84 26.72 0 117931..118701 - 256 18309066 iolR CPE0084 - transcription repressor of myo-inositol catabolism operon 85 32.38 0 119183..120337 + 384 18309067 mdh CPE0085 - alcohol dehydrogenase 86 34.87 +1 120344..121189 + 281 18309068 alf1 CPE0086 - fructose-bisphosphate aldolase 87 32.25 0 121203..122219 + 338 18309069 iolC CPE0087 - myo-inositol catabolism protein 88 32.94 +1 122233..123000 + 255 18309070 iolB CPE0088 - myo-inositol catabolism protein 89 34.11 +1 123017..124936 + 639 18309071 iolD CPE0089 - myo-inositol catabolism protein 90 31.75 0 125006..126013 + 335 18309072 - CPE0090 - dehydrogenase 91 30.20 0 126132..127025 + 297 18309073 iolE CPE0091 - myo-inositol catabolism protein 92 32.70 +1 127107..128696 + 529 18309074 - CPE0092 - putative symporter YidK 93 32.67 +1 128783..129832 + 349 18309075 - CPE0093 - dehydrogenase 94 31.75 0 130202..130960 + 252 18309076 - CPE0094 - hypothetical protein 95 32.56 0 131191..131967 + 258 18309077 - CPE0095 - crotonase 96 35.27 +1 132070..133620 + 516 18309078 - CPE0096 - propionate CoA-transferase 97 33.51 +1 133724..134860 + 378 18309079 acdS CPE0097 - acyl-CoA dehydrogenase 98 28.77 0 135262..135612 - 116 18309080 - CPE0098 - hypothetical protein 99 33.86 +1 136190..137320 + 376 18309081 gldA CPE0099 - glycerol dehydrogenase 100 33.10 +1 137346..139094 + 582 18309082 - CPE0100 - dihydroxyacetone kinase 101 30.54 0 139454..140887 + 477 18309083 - CPE0101 - multidrug resistance protein 102 28.21 0 141164..141436 + 90 18309084 - CPE0102 - hypothetical protein 103 32.70 +1 141837..142790 - 317 18309085 ldh CPE0103 - L-lactate dehydrogenase 104 23.04 -1 143416..144591 + 391 18309086 - CPE0104 - hypothetical protein 105 27.40 0 144710..145147 + 145 18309087 - CPE0105 - hypothetical protein 106 27.80 0 145358..146098 + 246 18309088 - CPE0106 - hypothetical protein 107 26.12 0 146210..147082 + 290 18309089 - CPE0107 - hypothetical protein 108 30.84 0 147218..148582 - 454 18309090 - CPE0108 - GTP-binding protein 109 27.02 0 149310..149594 - 94 18309091 - CPE0109 - hypothetical protein 110 31.50 0 150273..151694 - 473 18309092 thiH CPE0110 - thiamine biosynthesis protein ThiH 111 32.14 0 151800..152051 - 83 18309093 - CPE0111 - hypothetical protein 112 30.33 0 152495..154060 + 521 18309094 - CPE0112 - hypothetical protein 113 31.58 0 154209..154436 + 75 18309095 - CPE0113 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.