version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 523 28.85 0 649296..650567 + 423 18309505 ulaA CPE0523 - ascorbate-specific PTS system enzyme IIC 524 29.18 0 650923..651717 + 264 18309506 - CPE0524 - HAD hydrolase, IIB family 525 26.62 0 651851..652297 - 148 18309507 - CPE0525 - MarR family transcriptional regulator 526 31.64 0 652622..654919 + 765 18309508 - CPE0526 - ABC transporter 527 32.69 +1 654912..656768 + 618 18309509 - CPE0527 - ABC transporter 528 22.11 -2 657262..658143 + 293 18309510 - CPE0528 - hypothetical protein 529 28.86 0 658398..659447 + 349 18309511 - CPE0529 - transporter, auxin efflux carrier family 530 31.83 0 659756..660754 + 332 18309512 ldhD CPE0530 - D-lactate dehydrogenase 531 27.14 0 661050..662600 + 516 18309513 - CPE0531 - sensor histidine kinase 532 29.00 0 662600..663268 + 222 18309514 - CPE0532 - two-component response regulator 533 29.44 0 663349..663528 + 59 18309515 - CPE0533 - hypothetical protein 534 29.76 0 663686..664216 + 176 18309516 - CPE0534 - hypothetical protein 535 30.06 0 665353..665994 + 213 18309517 - CPE0535 - hypothetical protein 536 26.00 0 666446..667372 + 308 18309518 - CPE0536 - transposase 537 26.01 0 667372..667644 + 90 18309519 - CPE0537 - transposase 538 28.74 0 667806..668219 + 137 18309520 - CPE0538 - hypothetical protein 539 25.99 0 668530..669645 + 371 18309521 - CPE0539 - NAD-dependent 4-hydroxybutyrate dehydrogenase 540 24.34 -1 669654..669842 + 62 18309522 - CPE0540 - hypothetical protein 541 26.73 0 669878..670558 + 226 18309523 - CPE0541 - TrkA domain protein 542 22.52 -1 670673..671125 - 150 18309524 - CPE0542 - MarR family transcriptional regulator 543 25.22 -1 671379..672512 + 377 18309525 - CPE0543 - permease 544 32.61 +1 672917..674308 + 463 18309526 - CPE0544 - proton/peptide symporter 545 28.70 0 674471..674686 - 71 18309527 - CPE0545 - hypothetical protein 546 22.08 -2 674700..674930 - 76 18309528 - CPE0546 - hypothetical protein 547 31.46 0 675180..676730 + 516 18309529 - CPE0547 - nitrite/sulfite reductase-like protein 548 29.17 0 677043..677858 + 271 18309530 speD CPE0548 - S-adenosylmethionine decarboxylase 549 32.23 0 677876..679330 + 484 18309531 dclY CPE0549 - Orn/Lys/Arg decarboxylase 550 30.75 0 679345..680196 + 283 18309532 speE CPE0550 - spermidine synthase 551 33.10 +1 680183..681040 + 285 18309533 speB CPE0551 - agmatinase 552 26.52 0 681358..681621 - 87 18309534 - CPE0552 - hypothetical protein 553 30.75 0 681830..685351 + 1173 18309535 nanJ CPE0553 - exo-alpha-sialidase 554 28.66 0 685497..686138 + 213 18309536 - CPE0554 - hypothetical protein 555 30.94 0 686246..688915 - 889 18309537 - CPE0555 - copper-translocating P-type ATPase 556 30.75 0 689207..689863 + 218 18309538 - CPE0556 - NAD(P)H dehydrogenase 557 28.94 0 691147..692283 + 378 18309539 - CPE0557 - glycine betaine/carnitine/choline ABC transporter 558 29.47 0 692276..693829 + 517 18309540 - CPE0558 - glycine betaine/carnitine/choline ABC transporter 559 24.13 -1 694087..694662 + 191 18309541 sigV CPE0559 - RNA polymerase sigma-70 factor 560 27.55 0 694655..695743 + 362 18309542 - CPE0560 - hypothetical protein 561 34.81 +1 696091..697512 + 473 18309543 - CPE0561 - PTS system 562 27.64 0 697716..699383 + 555 18309544 - CPE0562 - alpha-glucosidase 563 28.25 0 699647..700354 + 235 18309545 treR CPE0563 - transcriptional regulator 564 32.01 0 700806..702992 - 728 18309546 spoVD CPE0564 - stage V sporulation protein D 565 27.95 0 703337..704005 + 222 18309547 - CPE0565 - N-acetylmuramoyl-L-alanine amidase 566 28.07 0 704572..705672 + 366 18309548 ribB CPE0566 - riboflavin biosynthesis protein RibD 567 28.75 0 705691..706344 + 217 18309549 risA CPE0567 - riboflavin synthase subunit alpha 568 32.11 0 706550..707695 + 381 18309550 ribA CPE0568 - riboflavin biosynthesis protein RibA 569 33.98 +1 707810..708271 + 153 18309551 ribH CPE0569 - riboflavin synthase subunit beta 570 30.93 0 708394..709266 - 290 18309552 - CPE0570 - hypothetical protein 571 29.17 0 709370..709777 - 135 18309553 - CPE0571 - hypothetical protein 572 29.55 0 710160..710423 + 87 18309554 - CPE0572 - hypothetical protein 573 32.70 +1 710699..712918 + 739 18309555 - CPE0573 - hypothetical protein 574 26.35 0 713265..714854 + 529 18309556 - CPE0574 - sensor histidine kinase 575 25.60 -1 714866..716455 + 529 18309557 - CPE0575 - DNA-binding response regulator, AraC family 576 34.20 +1 716608..717993 + 461 18309558 - CPE0576 - ABC transporter 577 31.62 0 718072..719007 + 311 18309559 - CPE0577 - ABC transporter permease 578 31.05 0 719139..719882 + 247 18309560 - CPE0578 - ABC transporter 579 31.18 0 720118..720813 + 231 18309561 - CPE0579 - DedA family protein 580 26.61 0 720785..721915 + 376 18309562 - CPE0580 - iron-sulfur binding reductase 581 25.68 0 722078..722665 + 195 18309563 - CPE0581 - hypothetical protein 582 28.28 0 722951..723583 + 210 18309564 - CPE0582 - hypothetical protein 583 34.33 +1 723576..724574 + 332 18309565 - CPE0583 - phosphate ABC transporter permease 584 32.54 0 725006..726898 - 630 18309566 - CPE0584 - PTS system 585 29.86 0 726902..727822 - 306 18309567 fruB CPE0585 - 1-phosphofructokinase 586 28.65 0 727822..728568 - 248 18309568 fruR CPE0586 - transcriptional regulator 587 24.69 -1 728859..729182 + 107 18309569 - CPE0587 - hypothetical protein 588 25.16 -1 729363..730463 - 366 18309570 - CPE0588 - permease 589 26.52 0 730721..731380 + 219 18309571 - CPE0589 - isochorismatase family protein 590 31.20 0 731757..733070 + 437 18309572 - CPE0590 - hypothetical protein 591 29.00 0 733374..734297 + 307 18309573 - CPE0591 - glutaminase 592 29.48 0 734586..735311 + 241 18309574 - CPE0592 - Mg2+ transporter 593 28.86 0 741120..741812 + 230 18309575 sfsA CPE0593 - sugar fermentation stimulation protein A 594 28.48 0 742291..742764 + 157 18309576 - CPE0594 - hydrolase, NUDIX family 595 30.84 0 743070..744470 + 466 18309577 lysA CPE0595 - diaminopimelate decarboxylase 596 29.21 0 744879..745145 + 88 18309578 - CPE0596 - hypothetical protein 597 28.63 0 745148..745678 + 176 18309579 sipS CPE0597 - signal peptidase type I 598 32.17 0 745703..747856 + 717 18309580 ftsH CPE0598 - ATP-dependent metalloprotease FtsH 599 26.97 0 748076..750196 + 706 18309581 - CPE0599 - hypothetical protein 600 31.18 0 750652..751488 + 278 18309582 - CPE0600 - amino acid ABC transporter 601 30.51 0 751519..752190 + 223 18309583 - CPE0601 - amino acid ABC transporter 602 30.15 0 752187..752909 + 240 18309584 - CPE0602 - amino acid ABC transporter 603 28.91 0 753127..754935 + 602 18309585 - CPE0603 - hypothetical protein 604 27.21 0 755187..757031 + 614 18309586 - CPE0604 - hypothetical protein 605 28.26 0 757134..758315 - 393 18309587 - CPE0605 - cation efflux family protein 606 31.18 0 758558..760465 + 635 18309588 entD CPE0606 - enterotoxin 607 29.63 0 760607..761902 + 431 18309589 - CPE0607 - putative aminopeptidase 2 608 30.26 0 761995..762189 - 64 18309590 - CPE0608 - hypothetical protein 609 28.21 0 762581..763420 + 279 18309591 - CPE0609 - HAD hydrolase, IIB family 610 28.83 0 763637..766966 - 1109 18309592 - CPE0610 - hypothetical protein 611 33.21 +1 767227..768822 - 531 18309593 - CPE0611 - peptide chain release factor 3 612 30.20 0 769036..769641 - 201 18309594 - CPE0612 - hypothetical protein 613 29.84 0 770017..770817 + 266 18309595 - CPE0613 - hypothetical protein 614 28.21 0 770858..771520 + 220 18309596 rfbP CPE0614 - undecaprenyl phosphate galactosephosphotransferase 615 26.45 0 771521..772435 + 304 18309597 rfbN CPE0615 - rhamnosyl transferase 616 31.63 0 772458..773339 + 293 18309598 rfbA CPE0616 - glucose-1-phosphate thymidylyltransferase 617 30.23 0 773532..774014 + 160 18309599 rfbC CPE0617 - dTDP-4-dehydrorhamnose 3,5-epimerase 618 29.04 0 774028..774912 + 294 18309600 rfbD CPE0618 - dTDP-4-dehydrorhamnose reductase 619 29.71 0 774940..775989 + 349 18309601 rfbB CPE0619 - dTDP-glucose 4,6-dehydratase 620 21.73 -2 776014..777228 + 404 18309602 - CPE0620 - hypothetical protein 621 26.15 0 777225..778073 + 282 18309603 - CPE0621 - glycosyltransferase 622 26.59 0 778167..778907 + 246 18309604 - CPE0622 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.