version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 477 27.01 0 597023..597907 + 294 18309459 - CPE0477 - beta-glycosyltransferase 478 24.53 -1 597933..599000 + 355 18309460 - CPE0478 - capsular polysaccharide biosynthesis protein 479 27.12 0 599019..600128 + 369 18309461 - CPE0479 - capsular polysaccharide biosynthesis protein 480 27.20 0 600146..601336 + 396 18309462 - CPE0480 - capsular polysaccharide biosynthsis protein 481 23.81 -1 601394..602422 + 342 18309463 - CPE0481 - beta-1,4-galactosyltransferase 482 23.12 -1 602440..603594 + 384 18309464 - CPE0482 - glycero-phosphotransferase 483 27.42 0 603657..604079 + 140 18309465 - CPE0483 - glycerol-3-phosphate cytidyltransferase 484 23.56 -1 604095..605087 + 330 18309466 - CPE0484 - capsular polysaccharide biosynthsis protein 485 25.44 -1 605106..606296 + 396 18309467 - CPE0485 - capsular polysaccharide biosynthsis protein 486 23.06 -1 606317..607504 + 395 18309468 - CPE0486 - galactosyl transferase 487 26.19 0 607514..608437 + 307 18309469 - CPE0487 - hypothetical protein 488 25.96 0 608456..609622 + 388 18309470 - CPE0488 - capsular polysaccharide biosynthsis protein 489 23.59 -1 609639..611177 + 512 18309471 - CPE0489 - flippase 490 25.19 -1 611190..612995 + 601 18309472 - CPE0490 - hypothetical protein 491 29.61 0 613798..614496 + 232 18309473 - CPE0491 - capsular polysaccharide biosynthsis protein 492 31.80 0 614510..615163 + 217 18309474 - CPE0492 - capsular polysaccharide biosynthsis protein 493 30.94 0 615362..616030 + 222 18309475 - CPE0493 - capsular polysaccharide biosynthsis protein 494 30.59 0 616051..617397 + 448 18309476 - CPE0494 - NDP-suger dehydrogenase 495 28.18 0 617414..618460 + 348 18309477 - CPE0495 - mannose-1-phosphate guanylyltransferase 496 27.55 0 618495..619220 + 241 18309478 - CPE0496 - N-acetyl-mannosamine transferase 497 25.52 -1 619235..619669 + 144 18309479 - CPE0497 - hypothetical protein 498 23.74 -1 619663..620319 + 218 18309480 - CPE0498 - hexosyltransferase 499 24.47 -1 620321..621448 + 375 18309481 - CPE0499 - hexosyltransferase 500 23.58 -1 621466..622695 + 409 18309482 - CPE0500 - hexosyltransferase 501 22.22 -1 622784..623764 + 326 18309483 - CPE0501 - capsular polysaccharide biosynthsis protein 502 24.00 -1 623775..624878 + 367 18309484 - CPE0502 - lipopolysaccharide biosynthesis protein 503 17.98 -2 624883..626367 + 494 18309485 - CPE0503 - hypothetical protein 504 20.44 -2 626387..627433 + 348 18309486 - CPE0504 - spore coat polysaccharide biosynthesis protein 505 22.35 -1 627408..628928 + 506 18309487 - CPE0505 - flippase 506 33.12 +1 629121..630041 + 306 18309488 galF CPE0506 - UTP-glucose-1-phosphate uridylyltransferase 507 29.94 0 630408..631055 + 215 18309489 - CPE0507 - putative RNA polymerase sigma factor 508 23.80 -1 631476..633719 + 747 18309490 - CPE0508 - hypothetical protein 509 31.07 0 633797..634813 + 338 18309491 galE CPE0509 - UDP-glucose 4-epimerase 510 32.80 +1 635095..636039 + 314 18309492 galF CPE0510 - UTP-glucose-1-phosphate uridylyltransferase 511 26.26 0 636364..637056 + 230 18309493 - CPE0511 - hypothetical protein 512 32.79 +1 637566..639770 + 734 18309494 agaN CPE0512 - alpha-galactosidase 513 24.53 -1 639916..640665 - 249 18309495 - CPE0513 - hypothetical protein 514 25.71 0 640904..641428 + 174 18309496 - CPE0514 - signal peptidase type I 515 31.13 0 641482..642117 + 211 18309497 - CPE0515 - hypothetical protein 516 26.31 0 642165..642890 + 241 18309498 - CPE0516 - hypothetical protein 517 24.82 -1 642907..644751 + 614 18309499 - CPE0517 - von Willebrand factor type A domain-containing protein 518 25.52 -1 644991..645707 + 238 18309500 - CPE0518 - DNA-binding response regulator 519 22.38 -1 645712..647007 + 431 18309501 - CPE0519 - sensor histidine kinase 520 26.77 0 647185..647991 + 268 18309502 - CPE0520 - hypothetical protein 521 30.65 0 648362..648808 + 148 18309503 - CPE0521 - hypothetical protein 522 30.04 0 648983..649255 + 90 18309504 - CPE0522 - hypothetical protein 523 28.85 0 649296..650567 + 423 18309505 ulaA CPE0523 - ascorbate-specific PTS system enzyme IIC 524 29.18 0 650923..651717 + 264 18309506 - CPE0524 - HAD hydrolase, IIB family 525 26.62 0 651851..652297 - 148 18309507 - CPE0525 - MarR family transcriptional regulator 526 31.64 0 652622..654919 + 765 18309508 - CPE0526 - ABC transporter 527 32.69 +1 654912..656768 + 618 18309509 - CPE0527 - ABC transporter 528 22.11 -2 657262..658143 + 293 18309510 - CPE0528 - hypothetical protein 529 28.86 0 658398..659447 + 349 18309511 - CPE0529 - transporter, auxin efflux carrier family 530 31.83 0 659756..660754 + 332 18309512 ldhD CPE0530 - D-lactate dehydrogenase 531 27.14 0 661050..662600 + 516 18309513 - CPE0531 - sensor histidine kinase 532 29.00 0 662600..663268 + 222 18309514 - CPE0532 - two-component response regulator 533 29.44 0 663349..663528 + 59 18309515 - CPE0533 - hypothetical protein 534 29.76 0 663686..664216 + 176 18309516 - CPE0534 - hypothetical protein 535 30.06 0 665353..665994 + 213 18309517 - CPE0535 - hypothetical protein 536 26.00 0 666446..667372 + 308 18309518 - CPE0536 - transposase 537 26.01 0 667372..667644 + 90 18309519 - CPE0537 - transposase 538 28.74 0 667806..668219 + 137 18309520 - CPE0538 - hypothetical protein 539 25.99 0 668530..669645 + 371 18309521 - CPE0539 - NAD-dependent 4-hydroxybutyrate dehydrogenase 540 24.34 -1 669654..669842 + 62 18309522 - CPE0540 - hypothetical protein 541 26.73 0 669878..670558 + 226 18309523 - CPE0541 - TrkA domain protein 542 22.52 -1 670673..671125 - 150 18309524 - CPE0542 - MarR family transcriptional regulator 543 25.22 -1 671379..672512 + 377 18309525 - CPE0543 - permease 544 32.61 +1 672917..674308 + 463 18309526 - CPE0544 - proton/peptide symporter 545 28.70 0 674471..674686 - 71 18309527 - CPE0545 - hypothetical protein 546 22.08 -2 674700..674930 - 76 18309528 - CPE0546 - hypothetical protein 547 31.46 0 675180..676730 + 516 18309529 - CPE0547 - nitrite/sulfite reductase-like protein 548 29.17 0 677043..677858 + 271 18309530 speD CPE0548 - S-adenosylmethionine decarboxylase 549 32.23 0 677876..679330 + 484 18309531 dclY CPE0549 - Orn/Lys/Arg decarboxylase 550 30.75 0 679345..680196 + 283 18309532 speE CPE0550 - spermidine synthase 551 33.10 +1 680183..681040 + 285 18309533 speB CPE0551 - agmatinase 552 26.52 0 681358..681621 - 87 18309534 - CPE0552 - hypothetical protein 553 30.75 0 681830..685351 + 1173 18309535 nanJ CPE0553 - exo-alpha-sialidase 554 28.66 0 685497..686138 + 213 18309536 - CPE0554 - hypothetical protein 555 30.94 0 686246..688915 - 889 18309537 - CPE0555 - copper-translocating P-type ATPase 556 30.75 0 689207..689863 + 218 18309538 - CPE0556 - NAD(P)H dehydrogenase 557 28.94 0 691147..692283 + 378 18309539 - CPE0557 - glycine betaine/carnitine/choline ABC transporter 558 29.47 0 692276..693829 + 517 18309540 - CPE0558 - glycine betaine/carnitine/choline ABC transporter 559 24.13 -1 694087..694662 + 191 18309541 sigV CPE0559 - RNA polymerase sigma-70 factor 560 27.55 0 694655..695743 + 362 18309542 - CPE0560 - hypothetical protein 561 34.81 +1 696091..697512 + 473 18309543 - CPE0561 - PTS system 562 27.64 0 697716..699383 + 555 18309544 - CPE0562 - alpha-glucosidase 563 28.25 0 699647..700354 + 235 18309545 treR CPE0563 - transcriptional regulator 564 32.01 0 700806..702992 - 728 18309546 spoVD CPE0564 - stage V sporulation protein D 565 27.95 0 703337..704005 + 222 18309547 - CPE0565 - N-acetylmuramoyl-L-alanine amidase 566 28.07 0 704572..705672 + 366 18309548 ribB CPE0566 - riboflavin biosynthesis protein RibD 567 28.75 0 705691..706344 + 217 18309549 risA CPE0567 - riboflavin synthase subunit alpha 568 32.11 0 706550..707695 + 381 18309550 ribA CPE0568 - riboflavin biosynthesis protein RibA 569 33.98 +1 707810..708271 + 153 18309551 ribH CPE0569 - riboflavin synthase subunit beta 570 30.93 0 708394..709266 - 290 18309552 - CPE0570 - hypothetical protein 571 29.17 0 709370..709777 - 135 18309553 - CPE0571 - hypothetical protein 572 29.55 0 710160..710423 + 87 18309554 - CPE0572 - hypothetical protein 573 32.70 +1 710699..712918 + 739 18309555 - CPE0573 - hypothetical protein 574 26.35 0 713265..714854 + 529 18309556 - CPE0574 - sensor histidine kinase 575 25.60 -1 714866..716455 + 529 18309557 - CPE0575 - DNA-binding response regulator, AraC family 576 34.20 +1 716608..717993 + 461 18309558 - CPE0576 - ABC transporter 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.