version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 343 29.43 0 433948..436122 + 724 18309325 recQ CPE0343 - ATP-dependent DNA helicase RecQ 344 25.56 -1 436353..437150 + 265 18309326 - CPE0344 - hypothetical protein 345 29.90 0 437275..438732 + 485 18309327 - CPE0345 - hypothetical protein 346 26.67 0 438898..439647 + 249 18309328 - CPE0346 - transcriptional regulator 347 25.00 -1 439781..440452 - 223 18309329 - CPE0347 - transcriptional regulator 348 32.45 0 441396..444215 + 939 18309330 uvrA CPE0348 - excinuclease ABC subunit A 349 30.11 0 444550..444984 + 144 18309331 - CPE0349 - FHA domain protein 350 29.43 0 444998..446227 + 409 18309332 ftsW CPE0350 - cell cycle protein, FtsW/RodA/SpoVE family 351 33.61 +1 446228..447691 + 487 18309333 - CPE0351 - penicillin-binding protein 352 31.78 0 447848..449710 + 620 18309334 uvrC CPE0352 - excinuclease ABC subunit C 353 32.24 0 449859..450773 + 304 18309335 murB CPE0353 - UDP-N-acetylenolpyruvoylglucosamine reductase 354 30.85 0 451013..451897 + 294 18309336 - CPE0354 - hypothetical protein 355 31.77 0 451894..453240 + 448 18309337 - CPE0355 - hypothetical protein 356 31.55 0 453243..454193 + 316 18309338 - CPE0356 - hypothetical protein 357 28.47 0 454367..454921 + 184 18309339 - CPE0357 - hypothetical protein 358 24.82 -1 455050..456294 - 414 18309340 - CPE0358 - hypothetical protein 359 23.46 -1 456308..456844 - 178 18309341 - CPE0359 - RNA polymerase ECF-type sigma factor 360 33.19 +1 457313..460891 + 1192 18309342 dnaE CPE0360 - DNA polymerase III DnaE 361 34.79 +1 461602..462561 + 319 18309343 pfkA CPE0361 - 6-phosphofructokinase 362 36.89 +2 462655..464058 + 467 18309344 pykA CPE0362 - pyruvate kinase 363 31.37 0 464641..464997 + 118 18309345 - CPE0363 - hypothetical protein 364 29.07 0 465305..466102 + 265 18309346 - CPE0364 - dehydrogenase 365 30.60 0 466277..467812 + 511 18309347 clsB CPE0365 - cardiolipin synthetase 366 29.05 0 468439..470001 + 520 18309348 - CPE0366 - GntR family transcriptional regulator/aminotransferase 367 31.21 0 470131..471498 + 455 18309349 - CPE0367 - RNA methyltransferase 368 25.22 -1 472441..473340 + 299 18309350 - CPE0368 - hypothetical protein 369 19.59 -2 473520..477425 + 1301 18309351 - CPE0369 - hypothetical protein 370 25.76 0 477962..478819 - 285 18309352 - CPE0370 - transcriptional regulator 371 31.91 0 479008..480276 + 422 18309353 - CPE0371 - hypothetical protein 372 26.54 0 480350..481276 + 308 18309354 - CPE0372 - ABC transporter 373 29.47 0 481293..482120 + 275 18309355 - CPE0373 - suger ABC transporter 374 29.03 0 482148..484355 + 735 18309356 aga CPE0374 - alpha-galactosidase 375 28.17 0 484394..486931 + 845 18309357 - CPE0375 - endo-beta-galactosidase C 376 25.91 0 487133..487684 + 183 18309358 - CPE0376 - hypothetical protein 377 30.40 0 487803..488381 + 192 18309359 - CPE0377 - TetR family transcriptional regulator 378 33.00 +1 488731..490524 + 597 18309360 - CPE0378 - 67 kDa myosin-cross-reactive antigen family protein 379 29.24 0 490919..492652 + 577 18309361 - CPE0379 - ABC transporter permease/ATP-binding protein 380 30.19 0 492645..494426 + 593 18309362 - CPE0380 - ABC transporter 381 28.57 0 494507..494905 - 132 18309363 - CPE0381 - hypothetical protein 382 29.93 0 495171..496199 + 342 18309364 - CPE0382 - autolytic lysozyme 383 29.90 0 496521..496928 + 135 18309365 - CPE0383 - hypothetical protein 384 27.04 0 497081..498001 - 306 18309366 - CPE0384 - hypothetical protein 385 32.39 0 498485..499225 + 246 18309367 - CPE0385 - oxidoreductase 386 28.14 0 499248..499979 - 243 18309368 - CPE0386 - transcriptional regulator 387 34.35 +1 500213..500998 + 261 18309369 udp CPE0387 - uridine phosphorylase 388 32.33 0 501176..502366 + 396 18309370 deoB CPE0388 - phosphopentomutase 389 32.37 0 502793..504238 - 481 18309371 arcD CPE0389 - amino acid permease 390 33.96 +1 504284..505246 - 320 18309372 dchS CPE0390 - histidine decarboxylase, pyruvoyl type 391 28.54 0 505714..506547 + 277 18309373 - CPE0391 - phosphoesterase 392 31.37 0 506672..506824 + 50 18309374 - CPE0392 - hypothetical protein 393 32.64 +1 506921..507784 + 287 18309375 - CPE0393 - hypothetical protein 394 28.81 0 508092..508997 + 301 18309376 nadA CPE0394 - quinolinate synthetase 395 31.06 0 509002..510321 + 439 18309377 nadB CPE0395 - L-aspartate oxidase 396 32.38 0 510278..511117 + 279 18309378 nadC CPE0396 - nicotinate-nucleotide pyrophosphorylase 397 36.13 +2 511369..512727 - 452 18309379 uapC CPE0397 - transporter 398 31.50 0 513402..514220 + 272 18309380 deoD CPE0398 - purine nucleoside phosphorylase 399 27.43 0 514310..514987 + 225 18309381 - CPE0399 - transporter 400 24.30 -1 515021..515662 + 213 18309382 - CPE0400 - hypothetical protein 401 21.38 -2 515887..516204 + 105 18309383 - CPE0401 - hypothetical protein 402 28.10 0 516217..516828 + 203 18309384 - CPE0402 - hypothetical protein 403 23.09 -1 517036..517572 + 178 18309385 - CPE0403 - hypothetical protein 404 30.94 0 518306..519643 + 445 18309386 brnQ CPE0404 - branched chain amino acid ABC transporter carrier protein 405 29.90 0 519899..520771 + 290 18309387 - CPE0405 - hypothetical protein 406 29.18 0 520903..522249 + 448 18309388 - CPE0406 - putative reticuline oxidase 407 25.71 0 522549..522902 + 117 18309389 - CPE0407 - hypothetical protein 408 31.15 0 523097..523921 + 274 18309390 - CPE0408 - hypothetical protein 409 29.92 0 524071..525504 + 477 18309391 - CPE0409 - hypothetical protein 410 25.92 0 525713..526912 + 399 18309392 - CPE0410 - transposase 411 27.87 0 527033..527965 + 310 18309393 - CPE0411 - monooxygenase 412 25.40 -1 528206..528583 + 125 18309394 - CPE0412 - hypothetical protein 413 31.59 0 528800..529372 + 190 18309395 - CPE0413 - carbonic anhydrase 414 28.17 0 529513..530151 + 212 18309396 - CPE0414 - hypothetical protein 415 25.64 -1 530176..530565 + 129 18309397 - CPE0415 - hypothetical protein 416 26.71 0 530899..532770 + 623 18309398 htpG CPE0416 - heat shock protein 90 417 28.70 0 532934..533926 + 330 18309399 - CPE0417 - LacI family transcriptional regulator 418 30.57 0 534362..536026 + 554 18309400 - CPE0418 - exo-alpha-1,4-glucosidase 419 33.21 +1 536285..537940 + 551 18309401 - CPE0419 - PTS system, IIBC component 420 28.03 0 537951..538742 + 263 18309402 - CPE0420 - endonuclease/exonuclease/phosphatase family protein 421 27.24 0 539283..540020 + 245 18309403 glpQ CPE0421 - glycerophosphodiester phosphodiesterase 422 30.54 0 540117..541403 + 428 18309404 - CPE0422 - hypothetical protein 423 28.59 0 541903..544515 + 870 18309405 pcrA CPE0423 - ATP-dependent DNA helicase 424 28.94 0 544692..545351 + 219 18309406 trmB CPE0424 - tRNA (guanine-N(7))-methyltransferase 425 24.56 -1 545510..546364 - 284 18309407 - CPE0425 - hypothetical protein 426 31.46 0 546981..548264 + 427 18309408 - CPE0426 - hypothetical protein 427 26.60 0 548732..549310 + 192 18309409 - CPE0427 - hypothetical protein 428 32.69 +1 549541..549696 + 51 18309410 - CPE0428 - hypothetical protein 429 24.09 -1 550064..550615 + 183 18309411 - CPE0429 - hypothetical protein 430 27.81 0 550703..551245 - 180 18309412 sipS CPE0430 - type I signal peptidase 431 24.44 -1 551453..552295 + 280 18309413 - CPE0431 - hypothetical protein 432 25.36 -1 552580..553419 + 279 18309414 - CPE0432 - hydrolase, alpha/beta fold family 433 30.40 0 553503..554798 + 431 18309415 - CPE0433 - hypothetical protein 434 30.27 0 555174..555662 + 162 18309416 - CPE0434 - GNAT family acetyltransferase 435 24.70 -1 555721..556056 - 111 18309417 - CPE0435 - hypothetical protein 436 29.74 0 556062..556478 - 138 18309418 - CPE0436 - hypothetical protein 437 28.33 0 557024..558361 + 445 18309419 hlyB CPE0437 - hemolysin 438 29.91 0 558636..559688 + 350 18309420 - CPE0438 - ion-uptake ABC transporter 439 28.44 0 559688..561280 + 530 18309421 - CPE0439 - iron-uptake ABC transporter 440 29.66 0 561283..561963 + 226 18309422 - CPE0440 - ABC transporter 441 33.77 +1 562253..562942 + 229 18309423 - CPE0441 - hypothetical protein 442 32.18 0 563132..563305 + 57 18309424 - CPE0442 - BFD-like iron-sulfur cluster-binding protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.