version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 309 29.84 0 392981..393667 + 228 18309291 - CPE0309 - transcriptional regulator 310 33.27 +1 393902..395425 + 507 18309292 - CPE0310 - L-lactate permease 311 31.56 0 395519..396307 + 262 18309293 etfB CPE0311 - electron transfer flavoprotein beta-subunit 312 32.83 +1 396320..397513 + 397 18309294 eftA CPE0312 - electron-transfer flavoprotein alpha-subunit 313 30.62 0 397515..398915 + 466 18309295 - CPE0313 - glycolate oxidase subunit 314 31.58 0 398998..399396 - 132 18309296 - CPE0314 - hypothetical protein 315 29.80 0 399764..400273 + 169 18309297 sipS CPE0315 - type I signal peptidase 316 28.33 0 400516..401295 - 259 18309298 - CPE0316 - transcriptional regulator 317 29.99 0 401487..402890 + 467 18309299 fucK CPE0317 - rhamnulokinase 318 34.45 +1 402971..404758 + 595 18309300 fucI CPE0318 - L-fucose isomerase 319 30.75 0 404788..405444 + 218 18309301 fucA CPE0319 - L-fuculose phosphate aldolase 320 27.40 0 405449..405886 + 145 18309302 - CPE0320 - hypothetical protein 321 28.48 0 405877..406350 + 157 18309303 - CPE0321 - PTS system protein 322 31.53 0 406367..407143 + 258 18309304 - CPE0322 - PTS system protein 323 28.86 0 407140..407943 + 267 18309305 - CPE0323 - PTS system protein 324 30.90 0 408080..409396 + 438 18309306 - CPE0324 - glycosyl hydrolase 325 28.20 0 409414..411303 + 629 18309307 - CPE0325 - hypothetical protein 326 32.40 0 411556..411984 + 142 18309308 lacA CPE0326 - galactose-6-phosphate isomerase subunit LacA 327 30.04 0 412020..412535 + 171 18309309 lacB CPE0327 - galactose-6-phosphate isomerase subunit LacB 328 28.40 0 412552..413484 + 310 18309310 lacC CPE0328 - tagatose-6-phosphate kinase 329 29.94 0 413725..416112 + 795 18309311 - CPE0329 - hypothetical protein 330 31.23 0 416323..416703 - 126 18309312 - CPE0330 - hypothetical protein 331 28.30 0 417022..417696 + 224 18309313 - CPE0331 - hypothetical protein 332 30.13 0 417887..418510 - 207 18309314 - CPE0332 - DedA family protein 333 31.38 0 418607..421264 - 885 18309315 - CPE0333 - cation-transporting ATPase 334 37.59 +2 422038..422601 + 187 18309316 - CPE0334 - hypothetical protein 335 28.80 0 423159..423731 + 190 18309317 xpt CPE0335 - xanthine phosphoribosyltransferase 336 27.22 0 424217..425149 + 310 18309318 - CPE0336 - hypothetical protein 337 32.54 0 425340..426722 + 460 18309319 - CPE0337 - amino acid transporter 338 27.74 0 426876..428180 - 434 18309320 - CPE0338 - hypothetical protein 339 33.91 +1 428452..429837 + 461 18309321 tldD CPE0339 - TldD protein 340 30.07 0 429853..431202 + 449 18309322 pmbA CPE0340 - TldD/PmbA family protein 341 30.43 0 431519..433105 + 528 18309323 - CPE0341 - aspartate aminotransferase 342 30.43 0 433417..433899 + 160 18309324 - CPE0342 - methylated-DNA-protein-cystein methyltransferase 343 29.43 0 433948..436122 + 724 18309325 recQ CPE0343 - ATP-dependent DNA helicase RecQ 344 25.56 -1 436353..437150 + 265 18309326 - CPE0344 - hypothetical protein 345 29.90 0 437275..438732 + 485 18309327 - CPE0345 - hypothetical protein 346 26.67 0 438898..439647 + 249 18309328 - CPE0346 - transcriptional regulator 347 25.00 -1 439781..440452 - 223 18309329 - CPE0347 - transcriptional regulator 348 32.45 0 441396..444215 + 939 18309330 uvrA CPE0348 - excinuclease ABC subunit A 349 30.11 0 444550..444984 + 144 18309331 - CPE0349 - FHA domain protein 350 29.43 0 444998..446227 + 409 18309332 ftsW CPE0350 - cell cycle protein, FtsW/RodA/SpoVE family 351 33.61 +1 446228..447691 + 487 18309333 - CPE0351 - penicillin-binding protein 352 31.78 0 447848..449710 + 620 18309334 uvrC CPE0352 - excinuclease ABC subunit C 353 32.24 0 449859..450773 + 304 18309335 murB CPE0353 - UDP-N-acetylenolpyruvoylglucosamine reductase 354 30.85 0 451013..451897 + 294 18309336 - CPE0354 - hypothetical protein 355 31.77 0 451894..453240 + 448 18309337 - CPE0355 - hypothetical protein 356 31.55 0 453243..454193 + 316 18309338 - CPE0356 - hypothetical protein 357 28.47 0 454367..454921 + 184 18309339 - CPE0357 - hypothetical protein 358 24.82 -1 455050..456294 - 414 18309340 - CPE0358 - hypothetical protein 359 23.46 -1 456308..456844 - 178 18309341 - CPE0359 - RNA polymerase ECF-type sigma factor 360 33.19 +1 457313..460891 + 1192 18309342 dnaE CPE0360 - DNA polymerase III DnaE 361 34.79 +1 461602..462561 + 319 18309343 pfkA CPE0361 - 6-phosphofructokinase 362 36.89 +2 462655..464058 + 467 18309344 pykA CPE0362 - pyruvate kinase 363 31.37 0 464641..464997 + 118 18309345 - CPE0363 - hypothetical protein 364 29.07 0 465305..466102 + 265 18309346 - CPE0364 - dehydrogenase 365 30.60 0 466277..467812 + 511 18309347 clsB CPE0365 - cardiolipin synthetase 366 29.05 0 468439..470001 + 520 18309348 - CPE0366 - GntR family transcriptional regulator/aminotransferase 367 31.21 0 470131..471498 + 455 18309349 - CPE0367 - RNA methyltransferase 368 25.22 -1 472441..473340 + 299 18309350 - CPE0368 - hypothetical protein 369 19.59 -2 473520..477425 + 1301 18309351 - CPE0369 - hypothetical protein 370 25.76 0 477962..478819 - 285 18309352 - CPE0370 - transcriptional regulator 371 31.91 0 479008..480276 + 422 18309353 - CPE0371 - hypothetical protein 372 26.54 0 480350..481276 + 308 18309354 - CPE0372 - ABC transporter 373 29.47 0 481293..482120 + 275 18309355 - CPE0373 - suger ABC transporter 374 29.03 0 482148..484355 + 735 18309356 aga CPE0374 - alpha-galactosidase 375 28.17 0 484394..486931 + 845 18309357 - CPE0375 - endo-beta-galactosidase C 376 25.91 0 487133..487684 + 183 18309358 - CPE0376 - hypothetical protein 377 30.40 0 487803..488381 + 192 18309359 - CPE0377 - TetR family transcriptional regulator 378 33.00 +1 488731..490524 + 597 18309360 - CPE0378 - 67 kDa myosin-cross-reactive antigen family protein 379 29.24 0 490919..492652 + 577 18309361 - CPE0379 - ABC transporter permease/ATP-binding protein 380 30.19 0 492645..494426 + 593 18309362 - CPE0380 - ABC transporter 381 28.57 0 494507..494905 - 132 18309363 - CPE0381 - hypothetical protein 382 29.93 0 495171..496199 + 342 18309364 - CPE0382 - autolytic lysozyme 383 29.90 0 496521..496928 + 135 18309365 - CPE0383 - hypothetical protein 384 27.04 0 497081..498001 - 306 18309366 - CPE0384 - hypothetical protein 385 32.39 0 498485..499225 + 246 18309367 - CPE0385 - oxidoreductase 386 28.14 0 499248..499979 - 243 18309368 - CPE0386 - transcriptional regulator 387 34.35 +1 500213..500998 + 261 18309369 udp CPE0387 - uridine phosphorylase 388 32.33 0 501176..502366 + 396 18309370 deoB CPE0388 - phosphopentomutase 389 32.37 0 502793..504238 - 481 18309371 arcD CPE0389 - amino acid permease 390 33.96 +1 504284..505246 - 320 18309372 dchS CPE0390 - histidine decarboxylase, pyruvoyl type 391 28.54 0 505714..506547 + 277 18309373 - CPE0391 - phosphoesterase 392 31.37 0 506672..506824 + 50 18309374 - CPE0392 - hypothetical protein 393 32.64 +1 506921..507784 + 287 18309375 - CPE0393 - hypothetical protein 394 28.81 0 508092..508997 + 301 18309376 nadA CPE0394 - quinolinate synthetase 395 31.06 0 509002..510321 + 439 18309377 nadB CPE0395 - L-aspartate oxidase 396 32.38 0 510278..511117 + 279 18309378 nadC CPE0396 - nicotinate-nucleotide pyrophosphorylase 397 36.13 +2 511369..512727 - 452 18309379 uapC CPE0397 - transporter 398 31.50 0 513402..514220 + 272 18309380 deoD CPE0398 - purine nucleoside phosphorylase 399 27.43 0 514310..514987 + 225 18309381 - CPE0399 - transporter 400 24.30 -1 515021..515662 + 213 18309382 - CPE0400 - hypothetical protein 401 21.38 -2 515887..516204 + 105 18309383 - CPE0401 - hypothetical protein 402 28.10 0 516217..516828 + 203 18309384 - CPE0402 - hypothetical protein 403 23.09 -1 517036..517572 + 178 18309385 - CPE0403 - hypothetical protein 404 30.94 0 518306..519643 + 445 18309386 brnQ CPE0404 - branched chain amino acid ABC transporter carrier protein 405 29.90 0 519899..520771 + 290 18309387 - CPE0405 - hypothetical protein 406 29.18 0 520903..522249 + 448 18309388 - CPE0406 - putative reticuline oxidase 407 25.71 0 522549..522902 + 117 18309389 - CPE0407 - hypothetical protein 408 31.15 0 523097..523921 + 274 18309390 - CPE0408 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.