version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2561 31.96 0 2932193..2933941 - 582 18311543 - CPE2561 - Ser-type protease 2562 31.27 0 2933944..2935641 - 565 18311544 - CPE2562 - protease CspB 2563 32.01 0 2935657..2937393 - 578 18311545 - CPE2563 - Ser-type protease 2564 27.98 0 2937534..2938205 - 223 18311546 - CPE2564 - hypothetical protein 2565 29.33 0 2938206..2938580 - 124 18311547 - CPE2565 - hypothetical protein 2566 33.14 +1 2938609..2939121 - 170 18311548 - CPE2566 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 2567 25.19 -1 2939362..2939631 - 89 18311549 - CPE2567 - hypothetical protein 2568 30.91 0 2939866..2940648 - 260 18311550 - CPE2568 - glutamate racemase 2569 29.86 0 2940944..2942845 + 633 18311551 - CPE2569 - glutamine synthetase 2570 26.67 0 2942935..2943219 - 94 18311552 - CPE2570 - hypothetical protein 2571 26.32 0 2943457..2944098 - 213 18311553 - CPE2571 - hypothetical protein 2572 32.96 +1 2944713..2947916 - 1067 18311554 carB CPE2572 - carbamoyl phosphate synthase large subunit 2573 32.00 0 2947929..2948978 - 349 18311555 carA CPE2573 - carbamoyl phosphate synthase small subunit 2574 33.64 +1 2949636..2950292 + 218 18311556 - CPE2574 - hypothetical protein 2575 31.64 0 2950548..2952020 - 490 18311557 - CPE2575 - [Fe] hydrogenase 2576 30.74 0 2952091..2952708 - 205 18311558 - CPE2576 - 3-methyladenine DNA glycosylase 2577 30.77 0 2953008..2953319 - 103 18311559 - CPE2577 - PTS system 2578 30.93 0 2953420..2954667 - 415 18311560 proA CPE2578 - gamma-glutamyl phosphate reductase 2579 30.62 0 2954670..2955479 - 269 18311561 proB CPE2579 - gamma-glutamyl kinase 2580 33.56 +1 2955566..2956444 - 292 18311562 - CPE2580 - oxidoreductase, short chain dehydrogenase/reductase family 2581 27.78 0 2956508..2957281 - 257 18311563 - CPE2581 - oxidoreductase, short-chain dehydrogenase/reductase family 2582 30.39 0 2957466..2958758 + 430 18311564 - CPE2582 - hypothetical protein 2583 28.07 0 2958849..2959076 + 75 18311565 - CPE2583 - hypothetical protein 2584 32.12 0 2959142..2960785 - 547 161485638 - CPE2584 - hydroxylamine reductase 2585 30.91 0 2961168..2962445 + 425 18311567 - CPE2585 - nucleoside recognition domain protein 2586 27.25 0 2962484..2963272 - 262 18311568 - CPE2586 - hypothetical protein 2587 32.82 +1 2963405..2963989 + 194 18311569 - CPE2587 - maltose transacetylase 2588 28.27 0 2964045..2964518 + 157 18311570 - CPE2588 - methionine sulfoxide reductase A 2589 28.42 0 2964520..2966004 - 494 18311571 - CPE2589 - site specific DNA-methyltransferase 2590 28.84 0 2966133..2968289 - 718 18311572 - CPE2590 - phage infection protein 2591 29.22 0 2968312..2970477 - 721 18311573 - CPE2591 - phage infection protein 2592 32.15 0 2970830..2971168 - 112 18311574 phnA CPE2592 - phnA family protein 2593 27.14 0 2971382..2972188 - 268 18311575 - CPE2593 - hypothetical protein 2594 30.04 0 2972325..2973356 - 343 18311576 - CPE2594 - hypothetical protein 2595 27.27 0 2973480..2974913 - 477 18311577 - CPE2595 - potassium/proton antiporter 2596 29.27 0 2975166..2975534 - 122 18311578 - CPE2596 - hypothetical protein 2597 22.06 -2 2976070..2976468 + 132 18311579 - CPE2597 - hypothetical protein 2598 33.22 +1 2976653..2977543 + 296 18311580 - CPE2598 - oxidoreductase 2599 31.37 0 2977704..2977856 - 50 18311581 - CPE2599 - hypothetical protein 2600 27.50 0 2978227..2978706 - 159 18311582 - CPE2600 - SPOUT methyltransferase superfamily protein 2601 29.84 0 2978953..2979324 - 123 18311583 - CPE2601 - hypothetical protein 2602 29.13 0 2979554..2980195 - 213 18311584 - CPE2602 - hypothetical protein 2603 30.54 0 2980302..2980802 - 166 18311585 - CPE2603 - hypothetical protein 2604 27.57 0 2980945..2981499 - 184 18311586 - CPE2604 - hypothetical protein 2605 30.05 0 2981515..2982306 - 263 18311587 - CPE2605 - metallo-beta-lactamase family protein 2606 34.93 +1 2982329..2983582 - 417 18311588 murA CPE2606 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2607 27.11 0 2983922..2984467 + 181 18311589 - CPE2607 - hypothetical protein 2608 23.54 -1 2984662..2985141 + 159 18311590 - CPE2608 - hypothetical protein 2609 32.64 +1 2985197..2985628 + 143 18311591 - CPE2609 - hypothetical protein 2610 29.41 0 2985695..2986891 + 398 18311592 aprX CPE2610 - subtilase family protein 2611 31.15 0 2986894..2987946 - 350 18311593 - CPE2611 - peptidase, M23/M37 family 2612 29.74 0 2988177..2989178 + 333 18311594 dnaD CPE2612 - chromosome replication initiation protein 2613 25.50 -1 2989175..2990170 + 331 18311595 dnaC CPE2613 - DNA replication protein DnaC 2614 24.96 -1 2991273..2991857 - 194 18311596 - CPE2614 - hypothetical protein 2615 30.66 0 2992054..2993250 + 398 18311597 - CPE2615 - hypothetical protein 2616 27.67 0 2993418..2994176 - 252 18311598 - CPE2616 - hypothetical protein 2617 26.99 0 2994199..2994939 - 246 18311599 - CPE2617 - acyl-ACP thioesterase family protein 2618 37.20 +2 2995072..2995614 - 180 18311600 - CPE2618 - hypothetical protein 2619 34.38 +1 2995896..2996087 - 63 18311601 - CPE2619 - hypothetical protein 2620 27.92 0 2996197..2996436 - 79 18311602 - CPE2620 - hypothetical protein 2621 34.00 +1 2996378..2996677 - 99 18311603 - CPE2621 - MutT/nudix family protein 2622 33.80 +1 2996805..2998091 - 428 18311604 purA CPE2622 - adenylosuccinate synthetase 2623 33.19 +1 2998572..2999252 + 226 18311605 sdhB CPE2623 - L-serine dehydratase beta subunit 2624 37.07 +2 2999253..3000134 + 293 18311606 sdhA CPE2624 - L-serine dehydratase alpha subunit 2625 28.73 0 3000370..3001542 + 390 18311607 - CPE2625 - tagatose-6-phosphate aldose/ketose isomerase 2626 34.15 +1 3001562..3002419 + 285 18311608 gatY CPE2626 - tagatose-bisphosphate aldolase 2627 29.06 0 3002476..3003201 - 241 18311609 - CPE2627 - GntR family transcriptional regulator 2628 25.76 0 3003338..3003601 - 87 18311610 - CPE2628 - hypothetical protein 2629 32.84 +1 3003618..3004022 - 134 18311611 - CPE2629 - PTS system protein 2630 32.84 +1 3004195..3005001 - 268 18311612 - CPE2630 - mannose permease IIm 2631 35.96 +1 3005001..3005798 - 265 18311613 - CPE2631 - PTS system protein 2632 32.52 0 3005839..3006327 - 162 18311614 - CPE2632 - PTS system protein 2633 31.34 0 3006605..3007405 - 266 18311615 proC CPE2633 - pyrroline-5-carboxylate reductase 2634 34.46 +1 3007583..3008917 - 444 18311616 dnaC CPE2634 - replicative DNA helicase 2635 32.04 0 3009333..3011192 - 619 18311617 lon CPE2635 - ATP-dependent proteinase La 2636 28.19 0 3011247..3011693 - 148 18311618 rplI CPE2636 - 50S ribosomal protein L9 2637 28.13 0 3011695..3013653 - 652 18311619 - CPE2637 - DHH family protein 2638 26.31 0 3013686..3014681 - 331 18311620 - CPE2638 - hypothetical protein 2639 25.16 -1 3014699..3015016 - 105 18311621 - CPE2639 - hypothetical protein 2640 31.69 0 3015299..3015541 - 80 18311622 rpsR CPE2640 - 30S ribosomal protein S18 2641 36.20 +2 3015572..3016024 - 150 18311623 - CPE2641 - phage-related single-strand DNA-binding protein 2642 35.05 +1 3016038..3016328 - 96 18311624 rpsF CPE2642 - 30S ribosomal protein S6 2643 28.17 0 3016469..3016681 - 70 18311625 - CPE2643 - hypothetical protein 2644 27.53 0 3016718..3017578 - 286 18311626 - CPE2644 - mechanosensitive ion channel family protein 2645 23.50 -1 3017611..3017844 - 77 18311627 - CPE2645 - hypothetical protein 2646 28.86 0 3018004..3018651 + 215 18311628 - CPE2646 - hypothetical protein 2647 30.15 0 3018663..3019823 + 386 18311629 nifS CPE2647 - cysteine desulfurase family protein 2648 20.66 -2 3019835..3020899 + 354 18311630 - CPE2648 - sporulation integral membrane protein YtvI 2649 28.26 0 3020949..3021539 + 196 18311631 - CPE2649 - putative sporulation protein YyaC 2650 25.30 -1 3021690..3022187 - 165 18311632 - CPE2650 - hypothetical protein 2651 27.18 0 3022236..3023096 - 286 18311633 spo0J CPE2651 - stage 0 sporulation protein J 2652 28.68 0 3023097..3023870 - 257 18311634 soj CPE2652 - sporulation initiation inhibitor protein soj 2653 28.61 0 3024120..3024839 - 239 18311635 gidB CPE2653 - glucose-inhibited division protein B 2654 32.49 0 3025016..3026908 - 630 18311636 gidA CPE2654 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2655 30.72 0 3026923..3028299 - 458 18311637 trmE CPE2655 - tRNA modification GTPase TrmE 2656 31.09 0 3028641..3029264 - 207 18311638 jag CPE2656 - SpoIIIJ-associated protein 2657 30.96 0 3029306..3030022 - 238 18311639 spoIIIJ CPE2657 - putative inner membrane protein translocase component YidC 2658 30.00 0 3030056..3030265 - 69 18311640 - CPE2658 - hypothetical protein 2659 30.69 0 3030237..3030614 - 125 18311641 rnpA CPE2659 - ribonuclease P 2660 29.63 0 3030675..3030809 - 44 18311642 rpmH CPE2660 - 50S ribosomal protein L34 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.