version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2439 31.62 0 2786817..2787050 - 77 18311421 - CPE2439 - glutaredoxin 2440 32.48 0 2787053..2787991 - 312 18311422 - CPE2440 - thioredoxin-disulfide reductase 2441 30.92 0 2788268..2790712 - 814 18311423 clpC CPE2441 - negative regulator of genetic competence MecB/ClpC 2442 24.56 -1 2790737..2791750 - 337 18311424 - CPE2442 - ATP:guanido phosphotransferase 2443 26.00 0 2791734..2792333 - 199 18311425 - CPE2443 - hypothetical protein 2444 29.39 0 2792281..2792736 - 151 18311426 ctsR CPE2444 - transcriptional repressor 2445 25.84 0 2792953..2793606 + 217 18311427 - CPE2445 - hypothetical protein 2446 27.62 0 2793657..2795318 - 553 18311428 - CPE2446 - hypothetical protein 2447 41.52 +2 2795456..2795626 - 56 18311429 fer CPE2447 - ferredoxin 2448 30.35 0 2795795..2796700 - 301 18311430 - CPE2448 - PSP1 domain protein 2449 26.84 0 2796703..2797626 - 307 18311431 holB CPE2449 - DNA polymerase III subunit delta' 2450 31.52 0 2797648..2797977 - 109 18311432 - CPE2450 - hypothetical protein 2451 26.28 0 2798134..2798289 - 51 18311433 - CPE2451 - hypothetical protein 2452 25.89 0 2798306..2798896 - 196 18311434 gmk CPE2452 - guanylate kinase-like protein 2453 25.09 -1 2799143..2800573 - 476 18311435 - CPE2453 - Orn/Lys/Arg decarboxylase 2454 24.86 -1 2800591..2800767 - 58 18311436 csfB CPE2454 - putative csfB protein 2455 30.60 0 2800923..2802092 + 389 18311437 - CPE2455 - amidohydrolase-like protein 2456 25.70 0 2802121..2802618 - 165 18311438 - CPE2456 - hypothetical protein 2457 27.09 0 2802893..2803837 + 314 18311439 - CPE2457 - transport protein 2458 27.72 0 2803902..2804810 + 302 18311440 - CPE2458 - hypothetical protein 2459 28.83 0 2812125..2813501 - 458 18311441 murD CPE2459 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2460 31.80 0 2813812..2814855 + 347 18311442 bioB CPE2460 - biotin synthase 2461 31.88 0 2815098..2816339 - 413 18311443 - CPE2461 - putative oxidoreductase 2462 25.40 -1 2816430..2817299 - 289 18311444 mccF CPE2462 - LD-carboxypeptidase family protein 2463 30.74 0 2817473..2818591 - 372 18311445 pepT CPE2463 - peptidase 2464 34.33 +1 2818777..2820180 - 467 18311446 glyS CPE2464 - glycyl-tRNA synthetase 2465 32.47 0 2820866..2822371 - 501 18311447 lysS CPE2465 - lysyl-tRNA synthetase 2466 31.87 0 2822397..2822873 - 158 18311448 greA CPE2466 - transcription elongation factor GreA 2467 32.93 +1 2823152..2824132 - 326 18311449 - CPE2467 - putative dihydrouridine synthase 2468 30.38 0 2824139..2824918 - 259 18311450 - CPE2468 - pantothenate kinase 2469 31.36 0 2825121..2826791 - 556 18311451 - CPE2469 - formate--tetrahydrofolate ligase 2470 33.94 +1 2826993..2828798 - 601 18311452 ftsH CPE2470 - ATP-dependent metalloprotease FtsH 2471 28.08 0 2828873..2829424 - 183 18311453 hprT CPE2471 - hypoxanthine phosphoribosyltransferase 2472 25.25 -1 2829427..2830836 - 469 18311454 - CPE2472 - tRNA(Ile)-lysidine synthetase 2473 28.23 0 2831053..2833443 - 796 18311455 spoIIE CPE2473 - stage II sprulation protein E 2474 29.88 0 2834751..2835155 - 134 18311456 - CPE2474 - hypothetical protein 2475 29.77 0 2835215..2835607 - 130 18311457 - CPE2475 - hypothetical protein 2476 19.20 -2 2835631..2836005 - 124 18311458 - CPE2476 - hypothetical protein 2477 22.33 -1 2836015..2836314 - 99 18311459 - CPE2477 - sporulation protein YabP 2478 27.97 0 2836445..2836705 - 86 18311460 - CPE2478 - S4 domain protein 2479 33.33 +1 2836813..2837088 - 91 18311461 dbh CPE2479 - DNA-binding protein HU 2480 29.20 0 2837305..2838756 - 483 18311462 - CPE2480 - MazG family protein 2481 29.94 0 2838786..2840318 - 510 18311463 spoVB CPE2481 - stage V sporulation protein B 2482 32.42 0 2840498..2841046 - 182 18311464 - CPE2482 - stage V sprulation protein T 2483 30.13 0 2841241..2842269 - 342 18311465 prsA CPE2483 - peptidylprolyl isomerase 2484 29.81 0 2842370..2845858 - 1162 18311466 mfd CPE2484 - transcription-repair coupling factor 2485 28.40 0 2845907..2846473 - 188 18311467 spoVC CPE2485 - peptidyl-tRNA hydrolase 2486 29.27 0 2846599..2847756 - 385 18311468 - CPE2486 - PDZ domain protein 2487 26.88 0 2847777..2849186 - 469 18311469 - CPE2487 - two-component sensor histidine kinase 2488 32.31 0 2849186..2849872 - 228 18311470 - CPE2488 - DNA-binding response regulator 2489 32.08 0 2850143..2851102 - 319 18311471 prs CPE2489 - ribose-phosphate pyrophosphokinase 2490 30.77 0 2851159..2852523 - 454 18311472 - CPE2490 - UDP-N-acetylglucosamine pyrophosphorylase 2491 30.04 0 2852733..2853005 - 90 18311473 spoVG CPE2491 - regulatory protein SpoVG 2492 28.98 0 2853116..2853919 - 267 18311474 purR CPE2492 - purine operon repressor 2493 30.76 0 2854253..2855653 + 466 161485639 murC CPE2493 - UDP-N-acetylmuramate--L-alanine ligase 2494 27.61 0 2855996..2856904 + 302 18311476 - CPE2494 - transcriptional regulator 2495 33.94 +1 2857020..2857838 + 272 18311477 punA CPE2495 - purine nucleoside phosphorylase 2496 35.62 +1 2857918..2859144 + 408 18311478 - CPE2496 - nucleoside transporter 2497 30.64 0 2859220..2860296 - 358 18311479 - CPE2497 - metallopeptidase, family M24 2498 27.04 0 2860464..2861162 + 232 18311480 - CPE2498 - Ser/Thr protein phosphatase family protein 2499 28.40 0 2861299..2862513 - 404 18311481 - CPE2499 - heme/steroid binding domain protein 2500 33.40 +1 2862925..2864322 + 465 18311482 asnC CPE2500 - asparaginyl-tRNA synthetase 2501 31.17 0 2864622..2866103 - 493 18311483 - CPE2501 - leucyl aminopeptidase 2502 24.28 -1 2866252..2866803 - 183 18311484 - CPE2502 - hypothetical protein 2503 27.45 0 2866933..2867442 - 169 18311485 nrdG CPE2503 - anaerobic ribonucleoside-triphosphate reductase activating protein 2504 27.42 0 2867551..2868159 + 202 18311486 - CPE2504 - hypothetical protein 2505 30.03 0 2868217..2869608 - 463 18311487 - CPE2505 - MATE efflux family protein 2506 29.53 0 2869991..2870989 - 332 18311488 add CPE2506 - adenosine deaminase 2507 31.49 0 2871382..2873499 - 705 18311489 nrdD CPE2507 - anaerobic ribonucleoside triphosphate reductase 2508 29.78 0 2873759..2874826 + 355 18311490 - CPE2508 - hypothetical protein 2509 30.73 0 2875086..2875931 + 281 18311491 - CPE2509 - degV family protein 2510 29.93 0 2875934..2876374 + 146 18311492 - CPE2510 - PadR family transcriptional regulator 2511 35.98 +1 2876426..2876614 - 62 18311493 fer CPE2511 - ferredoxin 2512 33.22 +1 2876762..2877616 - 284 18311494 - CPE2512 - Mrp protein 2513 26.90 0 2877637..2878476 - 279 18311495 - CPE2513 - putative lipoprotein 2514 31.52 0 2878466..2879236 - 256 18311496 - CPE2514 - prolipoprotein diacylglyceryl transferase 2515 27.05 0 2879339..2879911 - 190 18311497 - CPE2515 - hypothetical protein 2516 28.47 0 2880060..2881682 - 540 18311498 - CPE2516 - hypothetical protein 2517 29.25 0 2881782..2882639 - 285 18311499 ksgA CPE2517 - dimethyladenosine transferase 2518 33.15 +1 2882651..2883199 - 182 18311500 - CPE2518 - primase-like protein 2519 32.45 0 2883336..2884358 - 340 18311501 - CPE2519 - 3D/G5 domain protein 2520 29.18 0 2884602..2885372 - 256 18311502 - CPE2520 - hydrolase, TatD family 2521 24.73 -1 2885391..2886890 - 499 18311503 - CPE2521 - hypothetical protein 2522 28.63 0 2886992..2887672 + 226 18311504 - CPE2522 - cyclic nucleotide-binding domain protein 2523 27.90 0 2887935..2889479 - 514 18311505 metS CPE2523 - methionyl-tRNA synthetase 2524 31.84 0 2889580..2891517 - 645 18311506 metG CPE2524 - methionyl-tRNA synthetase 2525 28.18 0 2892007..2892588 + 193 18311507 - CPE2525 - hypothetical protein 2526 29.61 0 2892610..2893119 + 169 18311508 - CPE2526 - hypothetical protein 2527 32.23 0 2893448..2895163 - 571 18311509 - CPE2527 - hypothetical protein 2528 29.49 0 2895589..2897202 - 537 18311510 - CPE2528 - hypothetical protein 2529 26.55 0 2897342..2897680 - 112 18311511 - CPE2529 - hypothetical protein 2530 28.19 0 2897788..2899032 - 414 18311512 - CPE2530 - xaa-pro aminopeptidase 2531 35.45 +1 2899180..2901777 - 865 18311513 adhE CPE2531 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2532 29.67 0 2902205..2902723 - 172 18311514 spmB CPE2532 - spore maturation protein B 2533 33.16 +1 2902735..2903313 - 192 18311515 spmA CPE2533 - spore maturation protein A 2534 23.89 -1 2903428..2903607 + 59 18311516 - CPE2534 - hypothetical protein 2535 30.41 0 2903647..2905014 - 455 18311517 - CPE2535 - MATE efflux family protein 2536 24.33 -1 2905203..2905835 - 210 18311518 - CPE2536 - hypothetical protein 2537 28.86 0 2905948..2906640 - 230 18311519 - CPE2537 - hypothetical protein 2538 26.90 0 2906644..2907078 - 144 18311520 - CPE2538 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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