version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2334 28.00 0 2686351..2686650 - 99 18311316 - CPE2334 - TrpR-like protein YerC/YecD 2335 32.14 0 2686790..2687629 - 279 18311317 - CPE2335 - hypothetical protein 2336 29.02 0 2687746..2689764 - 672 18311318 gde CPE2336 - glycogen debranching protein 2337 29.57 0 2690107..2692470 - 787 18311319 glgP CPE2337 - glycogen phosphorylase 2338 31.06 0 2692463..2693956 - 497 18311320 malQ CPE2338 - 4-alpha-glucanotransferase 2339 28.91 0 2693978..2696125 - 715 18311321 - CPE2339 - alpha-glucosidase 2340 29.09 0 2696149..2697162 - 337 18311322 malR CPE2340 - LacI family transcriptional regulator 2341 31.66 0 2697457..2698350 - 297 18311323 - CPE2341 - maltose ABC transporter 2342 30.40 0 2698352..2699305 - 317 18311324 - CPE2342 - maltose ABC transporter 2343 33.25 +1 2699392..2700618 - 408 18311325 - CPE2343 - maltose ABC transporter 2344 24.63 -1 2701079..2702020 - 313 18311326 - CPE2344 - hypothetical protein 2345 31.44 0 2702055..2703164 - 369 18311327 - CPE2345 - maltose ABC transportor 2346 33.51 +1 2703382..2705100 - 572 18311328 hydA CPE2346 - iron hydrogenase 2347 32.68 +1 2705326..2706396 - 356 18311329 buk CPE2347 - butyrate kinase 2348 31.52 0 2706421..2707410 - 329 18311330 ptb CPE2348 - phosphate butyryltransferase 2349 31.65 0 2707512..2709113 - 533 18311331 - CPE2349 - hypothetical protein 2350 29.95 0 2709189..2710517 - 442 18311332 - CPE2350 - hypothetical protein 2351 28.09 0 2710484..2711341 - 285 18311333 - CPE2351 - hypothetical protein 2352 23.57 -1 2711502..2712464 + 320 18311334 - CPE2352 - hypothetical protein 2353 32.01 0 2712535..2713137 + 200 18311335 - CPE2353 - spore cortex-lytic enzyme 2354 32.17 0 2713169..2714029 - 286 18311336 trxR CPE2354 - thioredoxin reductase 2355 30.79 0 2714056..2714370 - 104 18311337 - CPE2355 - thioredoxin 2356 31.62 0 2714487..2715656 - 389 18311338 - CPE2356 - isoaspartyl dipeptidase 2357 33.83 +1 2715821..2717440 - 539 18311339 - CPE2357 - phosphoenolpyruvate-protein phosphotransferase 2358 28.60 0 2717915..2719921 + 668 18311340 - CPE2358 - sigma-L-dependent transcriptional regulator 2359 31.82 0 2720091..2720684 - 197 18311341 rpsD CPE2359 - 30S ribosomal protein S4 2360 28.79 0 2721085..2722119 - 344 18311342 nrdF CPE2360 - ribonucleotide-diphosphate reductase subunit beta 2361 31.45 0 2722215..2724446 - 743 18311343 nrdA CPE2361 - ribonucleotide-diphosphate reductase subunit alpha 2362 27.73 0 2724730..2725086 - 118 18311344 - CPE2362 - ArsC family protein 2363 25.40 -1 2725258..2727084 - 608 18311345 - CPE2363 - two-component sensor histidine kinase 2364 28.04 0 2727062..2727760 - 232 18311346 - CPE2364 - DNA-binding response regulator 2365 28.09 0 2728014..2728871 + 285 18311347 - CPE2365 - hypothetical protein 2366 18.30 -2 2728973..2729125 + 50 18311348 - CPE2366 - hypothetical protein 2367 30.21 0 2729132..2729803 - 223 18311349 - CPE2367 - N-acetylmuramoyl-L-alanine amidase 2368 30.67 0 2729994..2731607 - 537 18311350 - CPE2368 - hypothetical protein 2369 34.10 +1 2731995..2732387 - 130 18311351 rpsI CPE2369 - 30S ribosomal protein S9 2370 36.32 +2 2732414..2732848 - 144 18311352 rplM CPE2370 - 50S ribosomal protein L13 2371 31.02 0 2732995..2733729 - 244 18311353 truA CPE2371 - tRNA pseudouridine synthase A 2372 27.63 0 2733887..2734693 - 268 18311354 - CPE2372 - hypothetical protein 2373 31.00 0 2734709..2735566 - 285 18311355 - CPE2373 - cobalt transporter ATP-binding subunit 2374 32.39 0 2735551..2736396 - 281 18311356 - CPE2374 - cobalt transporter ATP-binding subunit 2375 36.26 +2 2736819..2737160 - 113 18311357 rplQ CPE2375 - 50S ribosomal protein L17 2376 31.75 0 2737177..2738124 - 315 18311358 rpoA CPE2376 - DNA-directed RNA polymerase subunit alpha 2377 35.10 +1 2738209..2738829 - 206 18311359 rpsD CPE2377 - 30S ribosomal protein S4 2378 39.39 +2 2738853..2739248 - 131 18311360 rpsK CPE2378 - 30S ribosomal protein S11 2379 32.51 0 2739265..2739630 - 121 18311361 rpsM CPE2379 - 30S ribosomal protein S13 2380 32.46 0 2739867..2739980 - 37 18311362 rpmJ CPE2380 - ribosomal protein L36 2381 31.96 0 2739993..2740211 - 72 18311363 infA CPE2381 - translation initiation factor IF-1 2382 30.10 0 2740219..2740527 - 102 18311364 - CPE2382 - hypothetical protein 2383 35.87 +1 2740586..2741335 - 249 18311365 map CPE2383 - methionine aminopeptidase, type I 2384 33.33 +1 2741335..2741991 - 218 18311366 adk CPE2384 - adenylate kinase 2385 31.53 0 2742012..2743289 - 425 18311367 secY CPE2385 - preprotein translocase subunit SecY 2386 36.96 +2 2743292..2743732 - 146 18311368 rplO CPE2386 - 50S ribosomal protein L15 2387 32.76 +1 2743766..2743939 - 57 18311369 rpmD CPE2387 - 50S ribosomal protein L30 2388 37.55 +2 2743951..2744448 - 165 18311370 rpsE CPE2388 - 30S ribosomal protein S5 2389 36.67 +2 2744469..2744828 - 119 18311371 rplR CPE2389 - 50S ribosomal protein L18 2390 36.67 +2 2744859..2745398 - 179 18311372 rplF CPE2390 - 50S ribosomal protein L6 2391 35.34 +1 2745495..2745893 - 132 18311373 rpsH CPE2391 - 30S ribosomal protein S8 2392 36.56 +2 2745927..2746112 - 61 18311374 rpsN CPE2392 - 30S ribosomal protein S14 2393 32.96 +1 2746129..2746668 - 179 18311375 rplE CPE2393 - 50S ribosomal protein L5 2394 32.06 0 2746691..2747005 - 104 18311376 rplX CPE2394 - 50S ribosomal protein L24 2395 35.77 +1 2747029..2747397 - 122 18311377 rplN CPE2395 - 50S ribosomal protein L14 2396 33.33 +1 2747428..2747682 - 84 18311378 rpsQ CPE2396 - 30S ribosomal protein S17 2397 30.00 0 2747704..2747913 - 69 18311379 rpmC CPE2397 - ribosomal protein L29 2398 38.39 +2 2747913..2748347 - 144 18311380 rplP CPE2398 - 50S ribosomal protein L16 2399 35.13 +1 2748378..2749046 - 222 18311381 rpsC CPE2399 - 30S ribosomal protein S3 2400 34.82 +1 2749067..2749402 - 111 18311382 rplV CPE2400 - 50S ribosomal protein L22 2401 31.91 0 2749430..2749711 - 93 18311383 rpsS CPE2401 - 30S ribosomal protein S19 2402 38.97 +2 2749782..2750615 - 277 18311384 rplB CPE2402 - 50S ribosomal protein L2 2403 35.37 +1 2750670..2750963 - 97 18311385 rplW CPE2403 - 50S ribosomal protein L23 2404 35.80 +1 2751051..2751578 - 175 18311386 rplD CPE2404 - 50S ribosomal protein L4 2405 36.83 +2 2751603..2752232 - 209 161485641 rplC CPE2405 - 50S ribosomal protein L3 2406 32.36 0 2752315..2752623 - 102 18311388 rpsJ CPE2406 - 30S ribosomal protein S10 2407 39.45 +2 2753318..2754511 - 397 18311389 tuf CPE2407 - elongation factor Tu 2408 37.40 +2 2754585..2756651 - 688 18311390 fus CPE2408 - elongation factor G 2409 35.46 +1 2756732..2757202 - 156 18311391 rpsG CPE2409 - 30S ribosomal protein S7 2410 38.32 +2 2757362..2757742 - 126 18311392 rpsL CPE2410 - 30S ribosomal protein S12 2411 31.09 0 2757800..2758066 - 88 18311393 - CPE2411 - ribosomal protein L7AE family protein 2412 34.38 +1 2758152..2761688 - 1178 18311394 rpoC CPE2412 - DNA-directed RNA polymerase subunit beta' 2413 34.98 +1 2761768..2765472 - 1234 18311395 rpoB CPE2413 - DNA-directed RNA polymerase subunit beta 2414 36.89 +2 2765777..2766142 - 121 18311396 rplL CPE2414 - ribosomal protein L7/L12 2415 34.93 +1 2766197..2766697 - 166 161485640 rplJ CPE2415 - 50S ribosomal protein L10 2416 36.09 +2 2766914..2767603 - 229 18311398 rplA CPE2416 - 50S ribosomal protein L1 2417 37.09 +2 2767661..2768086 - 141 18311399 rplK CPE2417 - 50S ribosomal protein L11 2418 33.52 +1 2768161..2768682 - 173 18311400 nusG CPE2418 - transcription antitermination protein NusG 2419 32.00 0 2768720..2768944 - 74 18311401 secE CPE2419 - preprotein translocase subunit SecE 2420 32.00 0 2768998..2769147 - 49 18311402 rpmG CPE2420 - 50S ribosomal protein L33 2421 39.70 +2 2769330..2770523 - 397 18311403 tuf CPE2421 - elongation factor Tu 2422 28.09 0 2770748..2771395 - 215 18311404 sigH CPE2422 - RNA polymerase factor sigma-70 2423 29.02 0 2771477..2771986 - 169 18311405 - CPE2423 - hypothetical protein 2424 29.54 0 2772002..2772871 - 289 18311406 - CPE2424 - RNA methyltransferase, TrmH family, group 3 2425 32.38 0 2772894..2773631 - 245 18311407 thyX CPE2425 - FAD-dependent thymidylate synthase 2426 29.44 0 2773647..2774057 - 136 18311408 - CPE2426 - hypothetical protein 2427 30.41 0 2774285..2775685 - 466 18311409 cysS CPE2427 - cysteinyl-tRNA synthetase 2428 32.92 +1 2775790..2777502 - 570 18311410 proS CPE2428 - prolyl-tRNA synthetase 2429 29.35 0 2777857..2778534 - 225 18311411 ispD CPE2429 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2430 29.90 0 2778548..2779654 - 368 18311412 - CPE2430 - PIN/TRAM domain protein 2431 31.09 0 2779966..2780367 + 133 18311413 - CPE2431 - hypothetical protein 2432 30.23 0 2780401..2781465 - 354 18311414 - CPE2432 - DNA integrity scanning protein DisA 2433 32.53 0 2781485..2782846 - 453 18311415 radA CPE2433 - DNA repair protein RadA 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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