version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2292 30.77 0 2637112..2637423 + 103 18311274 - CPE2292 - hypothetical protein 2293 29.93 0 2637545..2638483 - 312 18311275 - CPE2293 - 8-oxoguanine DNA glycosylase 2294 33.58 +1 2638493..2638897 - 134 18311276 - CPE2294 - hypothetical protein 2295 26.75 0 2639141..2639641 - 166 18311277 lepW CPE2295 - signal peptidase type I 2296 28.16 0 2639783..2641483 - 566 18311278 - CPE2296 - ABC transporter 2297 33.22 +1 2641742..2642590 - 282 18311279 - CPE2297 - 3-hydroxybutyryl-CoA dehydrogenase 2298 33.04 +1 2642704..2643711 - 335 18311280 fixB CPE2298 - 3-hydroxybutyryl-CoA dehydrogenase 2299 32.56 0 2643733..2644512 - 259 18311281 etfB CPE2299 - electron transfer flavoprotein beta subunit 2300 34.47 +1 2644531..2645670 - 379 18311282 bcd CPE2300 - butyryl-CoA dehydrogenase 2301 32.69 +1 2645717..2646499 - 260 18311283 crt CPE2301 - 3-hydroxybutyryl-CoA dehydratase 2302 30.20 0 2646762..2647400 - 212 18311284 - CPE2302 - redox-sensing transcriptional repressor Rex 2303 30.74 0 2647890..2650088 - 732 18311285 - CPE2303 - heavy metal-transporting ATPase 2304 28.89 0 2650104..2650463 - 119 18311286 - CPE2304 - transcriptional regulator 2305 28.50 0 2650598..2651218 - 206 18311287 - CPE2305 - hypothetical protein 2306 26.77 0 2651306..2651884 - 192 18311288 - CPE2306 - hypothetical protein 2307 25.06 -1 2652430..2652840 - 136 18311289 - CPE2307 - hypothetical protein 2308 31.75 0 2653069..2654139 - 356 18311290 - CPE2308 - mannose-1-phosphate guanylyltransferase 2309 31.67 0 2654377..2655756 - 459 18311291 - CPE2309 - beta-glucosidase 2310 28.18 0 2656453..2657829 - 458 18311292 aldH CPE2310 - aldehyde dehydrogenase 2311 25.74 0 2657979..2658689 - 236 18311293 - CPE2311 - hypothetical protein 2312 27.39 0 2658798..2659739 + 313 18311294 - CPE2312 - hypothetical protein 2313 27.92 0 2659981..2660886 - 301 18311295 - CPE2313 - hypothetical protein 2314 24.56 -1 2660908..2661921 - 337 18311296 - CPE2314 - hypothetical protein 2315 31.71 0 2661982..2662659 - 225 18311297 - CPE2315 - sortase family protein 2316 30.79 0 2663009..2663479 + 156 18311298 ispF CPE2316 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2317 30.52 0 2663655..2664968 - 437 18311299 - CPE2317 - Na+/H+ antiporter 2318 28.94 0 2665305..2666147 - 280 18311300 - CPE2318 - pyridoxamine kinase 2319 27.13 0 2666820..2667512 - 230 18311301 - CPE2319 - hypothetical protein 2320 26.42 0 2667702..2668106 + 134 18311302 - CPE2320 - hypothetical protein 2321 25.67 0 2668165..2669574 - 469 18311303 - CPE2321 - hypothetical protein 2322 33.07 +1 2670843..2672774 + 643 18311304 thrS CPE2322 - threonyl-tRNA synthetase 2323 29.85 0 2673241..2674935 - 564 18311305 - CPE2323 - oligoendopeptidase, M3 family 2324 26.94 0 2675031..2675609 - 192 18311306 - CPE2324 - 5-formyltetrahydrofolate cyclo-ligase family protein 2325 31.24 0 2675835..2676647 - 270 18311307 - CPE2325 - hypothetical protein 2326 29.24 0 2676861..2677031 - 56 18311308 - CPE2326 - hypothetical protein 2327 31.70 0 2677051..2678883 - 610 18311309 glmS CPE2327 - D-fructose-6-phosphate amidotransferase 2328 28.76 0 2679676..2680200 + 174 18311310 - CPE2328 - hypothetical protein 2329 32.59 0 2680350..2681696 - 448 18311311 - CPE2329 - phosphoglucosamine mutase 2330 28.15 0 2682169..2683461 + 430 18311312 - CPE2330 - hypothetical protein 2331 26.85 0 2683722..2685125 - 467 18311313 - CPE2331 - two-component sensor histidine kinase 2332 29.15 0 2685106..2685798 - 230 18311314 - CPE2332 - two-component response regulator 2333 35.53 +1 2685968..2686285 - 105 18311315 - CPE2333 - hypothetical protein 2334 28.00 0 2686351..2686650 - 99 18311316 - CPE2334 - TrpR-like protein YerC/YecD 2335 32.14 0 2686790..2687629 - 279 18311317 - CPE2335 - hypothetical protein 2336 29.02 0 2687746..2689764 - 672 18311318 gde CPE2336 - glycogen debranching protein 2337 29.57 0 2690107..2692470 - 787 18311319 glgP CPE2337 - glycogen phosphorylase 2338 31.06 0 2692463..2693956 - 497 18311320 malQ CPE2338 - 4-alpha-glucanotransferase 2339 28.91 0 2693978..2696125 - 715 18311321 - CPE2339 - alpha-glucosidase 2340 29.09 0 2696149..2697162 - 337 18311322 malR CPE2340 - LacI family transcriptional regulator 2341 31.66 0 2697457..2698350 - 297 18311323 - CPE2341 - maltose ABC transporter 2342 30.40 0 2698352..2699305 - 317 18311324 - CPE2342 - maltose ABC transporter 2343 33.25 +1 2699392..2700618 - 408 18311325 - CPE2343 - maltose ABC transporter 2344 24.63 -1 2701079..2702020 - 313 18311326 - CPE2344 - hypothetical protein 2345 31.44 0 2702055..2703164 - 369 18311327 - CPE2345 - maltose ABC transportor 2346 33.51 +1 2703382..2705100 - 572 18311328 hydA CPE2346 - iron hydrogenase 2347 32.68 +1 2705326..2706396 - 356 18311329 buk CPE2347 - butyrate kinase 2348 31.52 0 2706421..2707410 - 329 18311330 ptb CPE2348 - phosphate butyryltransferase 2349 31.65 0 2707512..2709113 - 533 18311331 - CPE2349 - hypothetical protein 2350 29.95 0 2709189..2710517 - 442 18311332 - CPE2350 - hypothetical protein 2351 28.09 0 2710484..2711341 - 285 18311333 - CPE2351 - hypothetical protein 2352 23.57 -1 2711502..2712464 + 320 18311334 - CPE2352 - hypothetical protein 2353 32.01 0 2712535..2713137 + 200 18311335 - CPE2353 - spore cortex-lytic enzyme 2354 32.17 0 2713169..2714029 - 286 18311336 trxR CPE2354 - thioredoxin reductase 2355 30.79 0 2714056..2714370 - 104 18311337 - CPE2355 - thioredoxin 2356 31.62 0 2714487..2715656 - 389 18311338 - CPE2356 - isoaspartyl dipeptidase 2357 33.83 +1 2715821..2717440 - 539 18311339 - CPE2357 - phosphoenolpyruvate-protein phosphotransferase 2358 28.60 0 2717915..2719921 + 668 18311340 - CPE2358 - sigma-L-dependent transcriptional regulator 2359 31.82 0 2720091..2720684 - 197 18311341 rpsD CPE2359 - 30S ribosomal protein S4 2360 28.79 0 2721085..2722119 - 344 18311342 nrdF CPE2360 - ribonucleotide-diphosphate reductase subunit beta 2361 31.45 0 2722215..2724446 - 743 18311343 nrdA CPE2361 - ribonucleotide-diphosphate reductase subunit alpha 2362 27.73 0 2724730..2725086 - 118 18311344 - CPE2362 - ArsC family protein 2363 25.40 -1 2725258..2727084 - 608 18311345 - CPE2363 - two-component sensor histidine kinase 2364 28.04 0 2727062..2727760 - 232 18311346 - CPE2364 - DNA-binding response regulator 2365 28.09 0 2728014..2728871 + 285 18311347 - CPE2365 - hypothetical protein 2366 18.30 -2 2728973..2729125 + 50 18311348 - CPE2366 - hypothetical protein 2367 30.21 0 2729132..2729803 - 223 18311349 - CPE2367 - N-acetylmuramoyl-L-alanine amidase 2368 30.67 0 2729994..2731607 - 537 18311350 - CPE2368 - hypothetical protein 2369 34.10 +1 2731995..2732387 - 130 18311351 rpsI CPE2369 - 30S ribosomal protein S9 2370 36.32 +2 2732414..2732848 - 144 18311352 rplM CPE2370 - 50S ribosomal protein L13 2371 31.02 0 2732995..2733729 - 244 18311353 truA CPE2371 - tRNA pseudouridine synthase A 2372 27.63 0 2733887..2734693 - 268 18311354 - CPE2372 - hypothetical protein 2373 31.00 0 2734709..2735566 - 285 18311355 - CPE2373 - cobalt transporter ATP-binding subunit 2374 32.39 0 2735551..2736396 - 281 18311356 - CPE2374 - cobalt transporter ATP-binding subunit 2375 36.26 +2 2736819..2737160 - 113 18311357 rplQ CPE2375 - 50S ribosomal protein L17 2376 31.75 0 2737177..2738124 - 315 18311358 rpoA CPE2376 - DNA-directed RNA polymerase subunit alpha 2377 35.10 +1 2738209..2738829 - 206 18311359 rpsD CPE2377 - 30S ribosomal protein S4 2378 39.39 +2 2738853..2739248 - 131 18311360 rpsK CPE2378 - 30S ribosomal protein S11 2379 32.51 0 2739265..2739630 - 121 18311361 rpsM CPE2379 - 30S ribosomal protein S13 2380 32.46 0 2739867..2739980 - 37 18311362 rpmJ CPE2380 - ribosomal protein L36 2381 31.96 0 2739993..2740211 - 72 18311363 infA CPE2381 - translation initiation factor IF-1 2382 30.10 0 2740219..2740527 - 102 18311364 - CPE2382 - hypothetical protein 2383 35.87 +1 2740586..2741335 - 249 18311365 map CPE2383 - methionine aminopeptidase, type I 2384 33.33 +1 2741335..2741991 - 218 18311366 adk CPE2384 - adenylate kinase 2385 31.53 0 2742012..2743289 - 425 18311367 secY CPE2385 - preprotein translocase subunit SecY 2386 36.96 +2 2743292..2743732 - 146 18311368 rplO CPE2386 - 50S ribosomal protein L15 2387 32.76 +1 2743766..2743939 - 57 18311369 rpmD CPE2387 - 50S ribosomal protein L30 2388 37.55 +2 2743951..2744448 - 165 18311370 rpsE CPE2388 - 30S ribosomal protein S5 2389 36.67 +2 2744469..2744828 - 119 18311371 rplR CPE2389 - 50S ribosomal protein L18 2390 36.67 +2 2744859..2745398 - 179 18311372 rplF CPE2390 - 50S ribosomal protein L6 2391 35.34 +1 2745495..2745893 - 132 18311373 rpsH CPE2391 - 30S ribosomal protein S8 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.