version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2225 26.61 0 2547425..2547796 - 123 18311207 - CPE2225 - hypothetical protein 2226 30.63 0 2547937..2548380 + 147 18311208 - CPE2226 - hypothetical protein 2227 27.50 0 2548415..2549443 + 342 18311209 apbA CPE2227 - thiamin biosynthesis lipoprotein 2228 29.33 0 2549567..2550691 - 374 18311210 eutH CPE2228 - ethanolamine transporter 2229 26.36 0 2550854..2551183 - 109 18311211 - CPE2229 - PTS system protein 2230 30.65 0 2551428..2552807 - 459 18311212 - CPE2230 - serine protease 2231 26.96 0 2552924..2553943 - 339 18311213 - CPE2231 - hydrolase, alpha/beta fold family 2232 34.12 +1 2553958..2554977 - 339 18311214 - CPE2232 - O-sialoglycoprotein endopeptidase 2233 26.38 0 2555119..2555751 + 210 18311215 - CPE2233 - hypothetical protein 2234 24.78 -1 2555760..2556320 + 186 18311216 - CPE2234 - acyl-CoA thioesterase I 2235 31.15 0 2556457..2557419 - 320 18311217 - CPE2235 - oxidoreductase, pyridine nucleotide-disulphide family 2236 28.10 0 2557451..2558023 - 190 18311218 - CPE2236 - hypothetical protein 2237 27.04 0 2558205..2560094 + 629 18311219 - CPE2237 - hypothetical protein 2238 27.49 0 2560233..2561756 - 507 18311220 - CPE2238 - putative lipoprotein 2239 26.98 0 2561773..2563188 - 471 18311221 - CPE2239 - two-component sensor histidine kinase 2240 28.63 0 2563369..2563836 - 155 18311222 - CPE2240 - two-component response regulator 2241 28.76 0 2563901..2564053 - 50 18311223 - CPE2241 - hypothetical protein 2242 30.59 0 2569898..2570698 - 266 18311224 - CPE2242 - hypothetical protein 2243 27.49 0 2570886..2571689 - 267 18311225 smtA CPE2243 - S-adenosylmethionine-dependent methltransferase 2244 24.74 -1 2571905..2572660 + 251 18311226 - CPE2244 - hypothetical protein 2245 26.73 0 2572779..2573081 + 100 18311227 - CPE2245 - hypothetical protein 2246 29.22 0 2573156..2573617 - 153 18311228 - CPE2246 - hypothetical protein 2247 24.91 -1 2573650..2574219 - 189 18311229 - CPE2247 - hypothetical protein 2248 28.25 0 2579928..2580497 - 189 18311230 - CPE2248 - chromate transporter 2249 27.17 0 2580484..2581035 - 183 18311231 - CPE2249 - chromate transporter 2250 24.11 -1 2581458..2582162 + 234 18311232 - CPE2250 - hypothetical protein 2251 30.65 0 2582494..2583945 - 483 18311233 pepD CPE2251 - aminoacyl-histidine dipeptidase 2252 29.30 0 2586002..2586472 - 156 18311234 - CPE2252 - Ser/Thr protein phosphatase family protein 2253 27.64 0 2586484..2587098 - 204 18311235 - CPE2253 - putative deoxyribonucleotide triphosphate pyrophosphatase 2254 33.60 +1 2587100..2587846 - 248 18311236 rnpH CPE2254 - ribonuclease PH 2255 25.29 -1 2588068..2589771 + 567 18311237 - CPE2255 - hypothetical protein 2256 26.30 0 2589975..2591495 - 506 18311238 - CPE2256 - oligopeptide-binding protein 2257 23.87 -1 2593111..2593575 - 154 18311239 - CPE2257 - hypothetical protein 2258 24.38 -1 2593699..2594022 + 107 18311240 - CPE2258 - hypothetical protein 2259 30.53 0 2594060..2596057 - 665 18311241 ligA CPE2259 - NAD-dependent DNA ligase LigA 2260 29.61 0 2596086..2598341 - 751 18311242 - CPE2260 - ATP-dependent DNA helicase PcrA 2261 27.12 0 2598553..2599341 - 262 18311243 - CPE2261 - hypothetical protein 2262 27.87 0 2599358..2599906 - 182 18311244 - CPE2262 - hypothetical protein 2263 27.23 0 2599908..2600579 - 223 18311245 - CPE2263 - hypothetical protein 2264 29.58 0 2601132..2601851 - 239 18311246 - CPE2264 - 16S pseudouridylate synthase 2265 27.12 0 2602225..2604285 - 686 18311247 - CPE2265 - two component regulator three Y motif protein 2266 29.33 0 2604658..2605107 - 149 18311248 - CPE2266 - hypothetical protein 2267 33.63 +1 2605305..2606657 - 450 18311249 pgi CPE2267 - glucose-6-phosphate isomerase 2268 26.19 0 2606687..2606896 - 69 18311250 - CPE2268 - hypothetical protein 2269 31.79 0 2607098..2608066 - 322 18311251 appF CPE2269 - oligopeptide ABC transporter 2270 33.33 +1 2608067..2609044 - 325 18311252 appD CPE2270 - oligopeptide ABC transporter 2271 32.02 0 2609058..2609972 - 304 18311253 appC CPE2271 - oligopeptide ABC transporter 2272 31.68 0 2609987..2610952 - 321 18311254 appB CPE2272 - oligopeptide ABC transporter 2273 32.53 0 2611027..2612766 - 579 18311255 appA CPE2273 - oligopeptide ABC transporter 2274 33.72 +1 2613396..2614688 + 430 18311256 narK CPE2274 - nitrate extrusion protein 2275 34.58 +1 2615047..2616576 - 509 18311257 guaA CPE2275 - bifunctional GMP synthase/glutamine amidotransferase protein 2276 33.75 +1 2616682..2618136 - 484 18311258 - CPE2276 - inositol-5-monophosphate dehydrogenase 2277 27.50 0 2618846..2621467 - 873 18311259 - CPE2277 - hypothetical protein 2278 23.53 -1 2621491..2622051 - 186 18311260 - CPE2278 - hypothetical protein 2279 25.04 -1 2622077..2624185 - 702 18311261 - CPE2279 - hypothetical protein 2280 24.35 -1 2624190..2625191 - 333 18311262 - CPE2280 - hypothetical protein 2281 27.09 0 2625212..2626429 - 405 18311263 - CPE2281 - hypothetical protein 2282 26.81 0 2626419..2626985 - 188 18311264 - CPE2282 - hypothetical protein 2283 27.45 0 2627000..2628154 - 384 18311265 - CPE2283 - type IV pilus assembly protein PilM 2284 31.51 0 2628270..2628818 - 182 18311266 - CPE2284 - hypothetical protein 2285 30.18 0 2628890..2630095 - 401 18311267 - CPE2285 - type II secretion system protein F 2286 30.56 0 2630122..2631813 - 563 18311268 - CPE2286 - secretion system protein E 2287 26.61 0 2631883..2632626 - 247 18311269 - CPE2287 - prepilin peptidase 2288 30.02 0 2632902..2633324 - 140 18311270 - CPE2288 - prepilin peptidase dependent protein A 2289 33.70 +1 2633990..2635609 - 539 18311271 groEL CPE2289 - chaperonin GroEL 2290 35.79 +1 2635664..2635948 - 94 18311272 groES CPE2290 - co-chaperonin GroES 2291 19.66 -2 2636319..2636969 + 216 18311273 - CPE2291 - hypothetical protein 2292 30.77 0 2637112..2637423 + 103 18311274 - CPE2292 - hypothetical protein 2293 29.93 0 2637545..2638483 - 312 18311275 - CPE2293 - 8-oxoguanine DNA glycosylase 2294 33.58 +1 2638493..2638897 - 134 18311276 - CPE2294 - hypothetical protein 2295 26.75 0 2639141..2639641 - 166 18311277 lepW CPE2295 - signal peptidase type I 2296 28.16 0 2639783..2641483 - 566 18311278 - CPE2296 - ABC transporter 2297 33.22 +1 2641742..2642590 - 282 18311279 - CPE2297 - 3-hydroxybutyryl-CoA dehydrogenase 2298 33.04 +1 2642704..2643711 - 335 18311280 fixB CPE2298 - 3-hydroxybutyryl-CoA dehydrogenase 2299 32.56 0 2643733..2644512 - 259 18311281 etfB CPE2299 - electron transfer flavoprotein beta subunit 2300 34.47 +1 2644531..2645670 - 379 18311282 bcd CPE2300 - butyryl-CoA dehydrogenase 2301 32.69 +1 2645717..2646499 - 260 18311283 crt CPE2301 - 3-hydroxybutyryl-CoA dehydratase 2302 30.20 0 2646762..2647400 - 212 18311284 - CPE2302 - redox-sensing transcriptional repressor Rex 2303 30.74 0 2647890..2650088 - 732 18311285 - CPE2303 - heavy metal-transporting ATPase 2304 28.89 0 2650104..2650463 - 119 18311286 - CPE2304 - transcriptional regulator 2305 28.50 0 2650598..2651218 - 206 18311287 - CPE2305 - hypothetical protein 2306 26.77 0 2651306..2651884 - 192 18311288 - CPE2306 - hypothetical protein 2307 25.06 -1 2652430..2652840 - 136 18311289 - CPE2307 - hypothetical protein 2308 31.75 0 2653069..2654139 - 356 18311290 - CPE2308 - mannose-1-phosphate guanylyltransferase 2309 31.67 0 2654377..2655756 - 459 18311291 - CPE2309 - beta-glucosidase 2310 28.18 0 2656453..2657829 - 458 18311292 aldH CPE2310 - aldehyde dehydrogenase 2311 25.74 0 2657979..2658689 - 236 18311293 - CPE2311 - hypothetical protein 2312 27.39 0 2658798..2659739 + 313 18311294 - CPE2312 - hypothetical protein 2313 27.92 0 2659981..2660886 - 301 18311295 - CPE2313 - hypothetical protein 2314 24.56 -1 2660908..2661921 - 337 18311296 - CPE2314 - hypothetical protein 2315 31.71 0 2661982..2662659 - 225 18311297 - CPE2315 - sortase family protein 2316 30.79 0 2663009..2663479 + 156 18311298 ispF CPE2316 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2317 30.52 0 2663655..2664968 - 437 18311299 - CPE2317 - Na+/H+ antiporter 2318 28.94 0 2665305..2666147 - 280 18311300 - CPE2318 - pyridoxamine kinase 2319 27.13 0 2666820..2667512 - 230 18311301 - CPE2319 - hypothetical protein 2320 26.42 0 2667702..2668106 + 134 18311302 - CPE2320 - hypothetical protein 2321 25.67 0 2668165..2669574 - 469 18311303 - CPE2321 - hypothetical protein 2322 33.07 +1 2670843..2672774 + 643 18311304 thrS CPE2322 - threonyl-tRNA synthetase 2323 29.85 0 2673241..2674935 - 564 18311305 - CPE2323 - oligoendopeptidase, M3 family 2324 26.94 0 2675031..2675609 - 192 18311306 - CPE2324 - 5-formyltetrahydrofolate cyclo-ligase family protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.