version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2175 29.53 0 2494907..2497141 - 744 18311157 recD CPE2175 - helicase, RecD/TraA family 2176 31.93 0 2497278..2498414 + 378 18311158 nagA CPE2176 - N-acetylglucosamine-6-phosphate deacetylase 2177 34.95 +1 2498554..2499729 - 391 161485642 metK CPE2177 - S-adenosylmethionine synthetase 2178 23.88 -1 2500946..2501590 - 214 18311160 - CPE2178 - hypothetical protein 2179 27.68 0 2501696..2502226 + 176 18311161 - CPE2179 - putative sporulation protein YyaC 2180 35.36 +1 2502265..2503302 - 345 18311162 mreV CPE2180 - cell shape determining protein 2181 28.17 0 2503393..2503644 - 83 18311163 spoIIID CPE2181 - stage III sporulation protein D 2182 31.52 0 2503719..2504489 - 256 18311164 - CPE2182 - hypothetical protein 2183 27.76 0 2504606..2505628 - 340 18311165 spoIID CPE2183 - stage II sporulation protein D 2184 31.20 0 2505740..2507005 - 421 18311166 murA CPE2184 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2185 22.02 -2 2507028..2507672 - 214 18311167 - CPE2185 - hypothetical protein 2186 32.09 0 2507854..2508255 - 133 18311168 atpE CPE2186 - F0F1 ATP synthase subunit epsilon 2187 36.55 +2 2508271..2509668 - 465 18311169 atpB CPE2187 - F0F1 ATP synthase subunit beta 2188 30.16 0 2509682..2510533 - 283 18311170 atpG CPE2188 - F0F1 ATP synthase subunit gamma 2189 33.53 +1 2510598..2512106 - 502 18311171 atpA CPE2189 - F0F1 ATP synthase subunit alpha 2190 26.85 0 2512117..2512656 - 179 18311172 atpD CPE2190 - F0F1 ATP synthase subunit delta 2191 28.75 0 2512659..2513138 - 159 18311173 atpF CPE2191 - F0F1 ATP synthase subunit B 2192 38.36 +2 2513238..2513456 - 72 18311174 atpL CPE2192 - F0F1 ATP synthase subunit C 2193 31.41 0 2513517..2514191 - 224 18311175 atpI CPE2193 - F0F1 ATP synthase subunit A 2194 23.77 -1 2514247..2514612 - 121 18311176 - CPE2194 - hypothetical protein 2195 35.54 +1 2515294..2516472 - 392 18311177 atoB CPE2195 - acetyl-CoA acetyltransferase 2196 30.04 0 2516741..2517895 - 384 18311178 - CPE2196 - UDP-N-acetylglucosamine 2-epimerase 2197 33.49 +1 2517959..2518588 - 209 18311179 upp CPE2197 - uracil phosphoribosyltransferase 2198 32.00 0 2518633..2519082 - 149 18311180 - CPE2198 - ribose-5-phosphate isomerase B 2199 16.67 -2 2519162..2519317 - 51 18311181 - CPE2199 - hypothetical protein 2200 31.15 0 2519346..2520398 - 350 18311182 - CPE2200 - Sua5/YciO/YrdC/YwlC family protein 2201 22.84 -1 2520421..2521011 - 196 18311183 - CPE2201 - hypothetical protein 2202 33.24 +1 2521090..2522172 - 360 18311184 prfA CPE2202 - peptide chain release factor 1 2203 28.36 0 2522229..2523938 - 569 18311185 - CPE2203 - hypothetical protein 2204 29.17 0 2524022..2524621 - 199 18311186 tdk CPE2204 - thymidine kinase 2205 35.75 +1 2524777..2524983 + 68 18311187 rpmE CPE2205 - 50S ribosomal protein L31 2206 26.04 0 2525092..2526216 + 374 18311188 - CPE2206 - putative monogalactosyldiacylglycerol synthase 2207 29.44 0 2526259..2527698 - 479 18311189 rho CPE2207 - transcription termination factor Rho 2208 33.83 +1 2527964..2529571 - 535 18311190 ctrA CPE2208 - CTP synthetase 2209 29.05 0 2529911..2530330 - 139 18311191 - CPE2209 - hypothetical protein 2210 30.07 0 2530353..2531333 - 326 18311192 - CPE2210 - hypothetical protein 2211 26.51 0 2531379..2532008 - 209 18311193 spoIIR CPE2211 - stage II sporulation protein R 2212 27.22 0 2532078..2532944 - 288 18311194 ipk CPE2212 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2213 29.56 0 2533080..2535704 - 874 18311195 cphA CPE2213 - cyanophycin synthetase 2214 30.07 0 2535691..2536518 - 275 18311196 cphB CPE2214 - cyanophycinase 2215 28.85 0 2536618..2538180 - 520 18311197 - CPE2215 - lysM domain protein 2216 33.33 +1 2538540..2538776 - 78 18311198 - CPE2216 - hypothetical protein 2217 28.49 0 2538939..2539826 - 295 18311199 - CPE2217 - peptidase family protein 2218 27.56 0 2540029..2541033 - 334 18311200 cotS CPE2218 - spore coat protein CotS 2219 27.57 0 2541142..2542269 + 375 18311201 - CPE2219 - mannosyltransferase B 2220 22.84 -1 2542452..2543480 - 342 18311202 cotS CPE2220 - spore coat protein 2221 24.27 -1 2543496..2544179 - 227 18311203 - CPE2221 - hypothetical protein 2222 27.88 0 2544187..2545194 - 335 18311204 cotS CPE2222 - spore coat protein 2223 29.06 0 2545323..2546468 + 381 18311205 - CPE2223 - mannosyltransferase B 2224 27.68 0 2546702..2547232 - 176 18311206 - CPE2224 - hypothetical protein 2225 26.61 0 2547425..2547796 - 123 18311207 - CPE2225 - hypothetical protein 2226 30.63 0 2547937..2548380 + 147 18311208 - CPE2226 - hypothetical protein 2227 27.50 0 2548415..2549443 + 342 18311209 apbA CPE2227 - thiamin biosynthesis lipoprotein 2228 29.33 0 2549567..2550691 - 374 18311210 eutH CPE2228 - ethanolamine transporter 2229 26.36 0 2550854..2551183 - 109 18311211 - CPE2229 - PTS system protein 2230 30.65 0 2551428..2552807 - 459 18311212 - CPE2230 - serine protease 2231 26.96 0 2552924..2553943 - 339 18311213 - CPE2231 - hydrolase, alpha/beta fold family 2232 34.12 +1 2553958..2554977 - 339 18311214 - CPE2232 - O-sialoglycoprotein endopeptidase 2233 26.38 0 2555119..2555751 + 210 18311215 - CPE2233 - hypothetical protein 2234 24.78 -1 2555760..2556320 + 186 18311216 - CPE2234 - acyl-CoA thioesterase I 2235 31.15 0 2556457..2557419 - 320 18311217 - CPE2235 - oxidoreductase, pyridine nucleotide-disulphide family 2236 28.10 0 2557451..2558023 - 190 18311218 - CPE2236 - hypothetical protein 2237 27.04 0 2558205..2560094 + 629 18311219 - CPE2237 - hypothetical protein 2238 27.49 0 2560233..2561756 - 507 18311220 - CPE2238 - putative lipoprotein 2239 26.98 0 2561773..2563188 - 471 18311221 - CPE2239 - two-component sensor histidine kinase 2240 28.63 0 2563369..2563836 - 155 18311222 - CPE2240 - two-component response regulator 2241 28.76 0 2563901..2564053 - 50 18311223 - CPE2241 - hypothetical protein 2242 30.59 0 2569898..2570698 - 266 18311224 - CPE2242 - hypothetical protein 2243 27.49 0 2570886..2571689 - 267 18311225 smtA CPE2243 - S-adenosylmethionine-dependent methltransferase 2244 24.74 -1 2571905..2572660 + 251 18311226 - CPE2244 - hypothetical protein 2245 26.73 0 2572779..2573081 + 100 18311227 - CPE2245 - hypothetical protein 2246 29.22 0 2573156..2573617 - 153 18311228 - CPE2246 - hypothetical protein 2247 24.91 -1 2573650..2574219 - 189 18311229 - CPE2247 - hypothetical protein 2248 28.25 0 2579928..2580497 - 189 18311230 - CPE2248 - chromate transporter 2249 27.17 0 2580484..2581035 - 183 18311231 - CPE2249 - chromate transporter 2250 24.11 -1 2581458..2582162 + 234 18311232 - CPE2250 - hypothetical protein 2251 30.65 0 2582494..2583945 - 483 18311233 pepD CPE2251 - aminoacyl-histidine dipeptidase 2252 29.30 0 2586002..2586472 - 156 18311234 - CPE2252 - Ser/Thr protein phosphatase family protein 2253 27.64 0 2586484..2587098 - 204 18311235 - CPE2253 - putative deoxyribonucleotide triphosphate pyrophosphatase 2254 33.60 +1 2587100..2587846 - 248 18311236 rnpH CPE2254 - ribonuclease PH 2255 25.29 -1 2588068..2589771 + 567 18311237 - CPE2255 - hypothetical protein 2256 26.30 0 2589975..2591495 - 506 18311238 - CPE2256 - oligopeptide-binding protein 2257 23.87 -1 2593111..2593575 - 154 18311239 - CPE2257 - hypothetical protein 2258 24.38 -1 2593699..2594022 + 107 18311240 - CPE2258 - hypothetical protein 2259 30.53 0 2594060..2596057 - 665 18311241 ligA CPE2259 - NAD-dependent DNA ligase LigA 2260 29.61 0 2596086..2598341 - 751 18311242 - CPE2260 - ATP-dependent DNA helicase PcrA 2261 27.12 0 2598553..2599341 - 262 18311243 - CPE2261 - hypothetical protein 2262 27.87 0 2599358..2599906 - 182 18311244 - CPE2262 - hypothetical protein 2263 27.23 0 2599908..2600579 - 223 18311245 - CPE2263 - hypothetical protein 2264 29.58 0 2601132..2601851 - 239 18311246 - CPE2264 - 16S pseudouridylate synthase 2265 27.12 0 2602225..2604285 - 686 18311247 - CPE2265 - two component regulator three Y motif protein 2266 29.33 0 2604658..2605107 - 149 18311248 - CPE2266 - hypothetical protein 2267 33.63 +1 2605305..2606657 - 450 18311249 pgi CPE2267 - glucose-6-phosphate isomerase 2268 26.19 0 2606687..2606896 - 69 18311250 - CPE2268 - hypothetical protein 2269 31.79 0 2607098..2608066 - 322 18311251 appF CPE2269 - oligopeptide ABC transporter 2270 33.33 +1 2608067..2609044 - 325 18311252 appD CPE2270 - oligopeptide ABC transporter 2271 32.02 0 2609058..2609972 - 304 18311253 appC CPE2271 - oligopeptide ABC transporter 2272 31.68 0 2609987..2610952 - 321 18311254 appB CPE2272 - oligopeptide ABC transporter 2273 32.53 0 2611027..2612766 - 579 18311255 appA CPE2273 - oligopeptide ABC transporter 2274 33.72 +1 2613396..2614688 + 430 18311256 narK CPE2274 - nitrate extrusion protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.