version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2123 28.61 0 2435436..2436749 - 437 18311105 - CPE2123 - membrane-bound protein 2124 28.77 0 2436772..2437341 - 189 18311106 - CPE2124 - HD domain protein 2125 27.09 0 2437344..2437952 - 202 18311107 nadD CPE2125 - nicotinic acid mononucleotide adenylyltransferase 2126 29.04 0 2437954..2438256 - 100 18311108 - CPE2126 - putative RNA-binding protein 2127 35.04 +1 2438274..2439560 - 428 18311109 obgE CPE2127 - GTPase ObgE 2128 36.63 +2 2439728..2440030 - 100 18311110 rpmA CPE2128 - 50S ribosomal protein L27 2129 33.99 +1 2440034..2440339 - 101 18311111 - CPE2129 - hypothetical protein 2130 36.54 +2 2440415..2440726 - 103 18311112 rplU CPE2130 - 50S ribosomal protein L21 2131 26.61 0 2440852..2442294 - 480 18311113 rng CPE2131 - ribonuclease, Rne/Rng family 2132 28.53 0 2442311..2443018 - 235 18311114 - CPE2132 - hypothetical protein 2133 31.66 0 2442996..2444849 - 617 18311115 - CPE2133 - radical SAM domain protein 2134 23.27 -1 2444981..2445835 - 284 18311116 - CPE2134 - peptidase, M50 family 2135 27.16 0 2445832..2446674 - 280 18311117 - CPE2135 - hypothetical protein 2136 31.73 0 2446824..2447948 - 374 18311118 spoVE CPE2136 - cell cycle protein, FtsW/RodA/SpoVE family 2137 28.94 0 2448096..2448368 - 90 18311119 minE CPE2137 - cell division topological specificity factor MinE 2138 31.33 0 2448379..2449176 - 265 18311120 minD CPE2138 - septum site-determining protein MinD 2139 29.09 0 2449205..2449840 - 211 18311121 minC CPE2139 - septum formation inhibitor 2140 30.99 0 2450087..2453158 - 1023 18311122 - CPE2140 - penicillin-binding protein 2 2141 27.11 0 2453167..2453664 - 165 18311123 - CPE2141 - rod shape-determining protein MreD 2142 30.28 0 2453680..2454531 - 283 18311124 mreC CPE2142 - rod shape-determining protein MreC 2143 35.57 +1 2454535..2455563 - 342 18311125 mreB CPE2143 - rod shape-determining protein 2144 31.29 0 2455583..2456266 - 227 18311126 radC CPE2144 - DNA repair protein RadC 2145 30.40 0 2456313..2456891 - 192 18311127 maf CPE2145 - Maf-like protein 2146 28.61 0 2457117..2457920 - 267 18311128 - CPE2146 - hypothetical protein 2147 28.45 0 2458182..2459000 - 272 18311129 - CPE2147 - hypothetical protein 2148 29.89 0 2459328..2460779 - 483 18311130 pepD CPE2148 - aminoacyl-histidine dipeptidase 2149 32.00 0 2460912..2462336 + 474 18311131 pykA CPE2149 - pyruvate kinase 2150 29.02 0 2462453..2463589 - 378 18311132 rpsA CPE2150 - 30S ribosomal protein S1 2151 33.33 +1 2463735..2463938 - 67 18311133 - CPE2151 - heavy metal binding protein 2152 29.28 0 2464043..2464807 - 254 18311134 - CPE2152 - hypothetical protein 2153 27.49 0 2464973..2465383 - 136 18311135 guaB CPE2153 - inosine-5'-monophosphate dehydrogenase 2154 26.25 0 2465469..2466371 - 300 18311136 - CPE2154 - exonuclease family protein 2155 27.75 0 2466626..2468380 - 584 18311137 - CPE2155 - hypothetical protein 2156 27.40 0 2468553..2470340 - 595 18311138 - CPE2156 - mutS domain protein 2157 33.99 +1 2470664..2472193 - 509 18311139 - CPE2157 - PTS system, glucose-specific IIBC component 2158 29.88 0 2472360..2473256 - 298 18311140 - CPE2158 - ABC transporter substrate-binding protein 2159 23.26 -1 2473482..2476250 - 922 18311141 - CPE2159 - hypothetical protein 2160 27.38 0 2476240..2477382 - 380 18311142 - CPE2160 - phosphoesterase 2161 35.52 +1 2477660..2477842 - 60 18311143 - CPE2161 - small acid-soluble protein Ssp1 2162 27.92 0 2477982..2480159 - 725 18311144 cpdC CPE2162 - 2`,3`-cyclic-nucleotide 2`-phosphodiesterase 2163 28.02 0 2480759..2481379 - 206 18311145 - CPE2163 - CBS domain protein 2164 29.25 0 2481679..2482143 + 154 18311146 - CPE2164 - hypothetical protein 2165 30.64 0 2482137..2482841 + 234 18311147 - CPE2165 - glycoprotease family protein 2166 29.08 0 2482841..2483287 + 148 18311148 - CPE2166 - ribosomal-protein-alanine acetyltransferase 2167 30.82 0 2483381..2483977 - 198 18311149 - CPE2167 - hypothetical protein 2168 29.63 0 2484325..2486487 - 720 18311150 - CPE2168 - hypothetical protein 2169 28.27 0 2486599..2487942 + 447 18311151 - CPE2169 - peptidase family protein 2170 32.61 +1 2488191..2489162 - 323 18311152 prfB CPE2170 - peptide chain release factor 2 2171 32.18 0 2489545..2492067 - 840 18311153 secA CPE2171 - preprotein translocase subunit SecA 2172 28.52 0 2492302..2492841 - 179 18311154 - CPE2172 - 30S ribosomal protein S30AE 2173 25.00 -1 2493292..2493951 - 219 18311155 comFC CPE2173 - comFC protein 2174 23.05 -1 2493927..2494889 - 320 18311156 - CPE2174 - hypothetical protein 2175 29.53 0 2494907..2497141 - 744 18311157 recD CPE2175 - helicase, RecD/TraA family 2176 31.93 0 2497278..2498414 + 378 18311158 nagA CPE2176 - N-acetylglucosamine-6-phosphate deacetylase 2177 34.95 +1 2498554..2499729 - 391 161485642 metK CPE2177 - S-adenosylmethionine synthetase 2178 23.88 -1 2500946..2501590 - 214 18311160 - CPE2178 - hypothetical protein 2179 27.68 0 2501696..2502226 + 176 18311161 - CPE2179 - putative sporulation protein YyaC 2180 35.36 +1 2502265..2503302 - 345 18311162 mreV CPE2180 - cell shape determining protein 2181 28.17 0 2503393..2503644 - 83 18311163 spoIIID CPE2181 - stage III sporulation protein D 2182 31.52 0 2503719..2504489 - 256 18311164 - CPE2182 - hypothetical protein 2183 27.76 0 2504606..2505628 - 340 18311165 spoIID CPE2183 - stage II sporulation protein D 2184 31.20 0 2505740..2507005 - 421 18311166 murA CPE2184 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2185 22.02 -2 2507028..2507672 - 214 18311167 - CPE2185 - hypothetical protein 2186 32.09 0 2507854..2508255 - 133 18311168 atpE CPE2186 - F0F1 ATP synthase subunit epsilon 2187 36.55 +2 2508271..2509668 - 465 18311169 atpB CPE2187 - F0F1 ATP synthase subunit beta 2188 30.16 0 2509682..2510533 - 283 18311170 atpG CPE2188 - F0F1 ATP synthase subunit gamma 2189 33.53 +1 2510598..2512106 - 502 18311171 atpA CPE2189 - F0F1 ATP synthase subunit alpha 2190 26.85 0 2512117..2512656 - 179 18311172 atpD CPE2190 - F0F1 ATP synthase subunit delta 2191 28.75 0 2512659..2513138 - 159 18311173 atpF CPE2191 - F0F1 ATP synthase subunit B 2192 38.36 +2 2513238..2513456 - 72 18311174 atpL CPE2192 - F0F1 ATP synthase subunit C 2193 31.41 0 2513517..2514191 - 224 18311175 atpI CPE2193 - F0F1 ATP synthase subunit A 2194 23.77 -1 2514247..2514612 - 121 18311176 - CPE2194 - hypothetical protein 2195 35.54 +1 2515294..2516472 - 392 18311177 atoB CPE2195 - acetyl-CoA acetyltransferase 2196 30.04 0 2516741..2517895 - 384 18311178 - CPE2196 - UDP-N-acetylglucosamine 2-epimerase 2197 33.49 +1 2517959..2518588 - 209 18311179 upp CPE2197 - uracil phosphoribosyltransferase 2198 32.00 0 2518633..2519082 - 149 18311180 - CPE2198 - ribose-5-phosphate isomerase B 2199 16.67 -2 2519162..2519317 - 51 18311181 - CPE2199 - hypothetical protein 2200 31.15 0 2519346..2520398 - 350 18311182 - CPE2200 - Sua5/YciO/YrdC/YwlC family protein 2201 22.84 -1 2520421..2521011 - 196 18311183 - CPE2201 - hypothetical protein 2202 33.24 +1 2521090..2522172 - 360 18311184 prfA CPE2202 - peptide chain release factor 1 2203 28.36 0 2522229..2523938 - 569 18311185 - CPE2203 - hypothetical protein 2204 29.17 0 2524022..2524621 - 199 18311186 tdk CPE2204 - thymidine kinase 2205 35.75 +1 2524777..2524983 + 68 18311187 rpmE CPE2205 - 50S ribosomal protein L31 2206 26.04 0 2525092..2526216 + 374 18311188 - CPE2206 - putative monogalactosyldiacylglycerol synthase 2207 29.44 0 2526259..2527698 - 479 18311189 rho CPE2207 - transcription termination factor Rho 2208 33.83 +1 2527964..2529571 - 535 18311190 ctrA CPE2208 - CTP synthetase 2209 29.05 0 2529911..2530330 - 139 18311191 - CPE2209 - hypothetical protein 2210 30.07 0 2530353..2531333 - 326 18311192 - CPE2210 - hypothetical protein 2211 26.51 0 2531379..2532008 - 209 18311193 spoIIR CPE2211 - stage II sporulation protein R 2212 27.22 0 2532078..2532944 - 288 18311194 ipk CPE2212 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2213 29.56 0 2533080..2535704 - 874 18311195 cphA CPE2213 - cyanophycin synthetase 2214 30.07 0 2535691..2536518 - 275 18311196 cphB CPE2214 - cyanophycinase 2215 28.85 0 2536618..2538180 - 520 18311197 - CPE2215 - lysM domain protein 2216 33.33 +1 2538540..2538776 - 78 18311198 - CPE2216 - hypothetical protein 2217 28.49 0 2538939..2539826 - 295 18311199 - CPE2217 - peptidase family protein 2218 27.56 0 2540029..2541033 - 334 18311200 cotS CPE2218 - spore coat protein CotS 2219 27.57 0 2541142..2542269 + 375 18311201 - CPE2219 - mannosyltransferase B 2220 22.84 -1 2542452..2543480 - 342 18311202 cotS CPE2220 - spore coat protein 2221 24.27 -1 2543496..2544179 - 227 18311203 - CPE2221 - hypothetical protein 2222 27.88 0 2544187..2545194 - 335 18311204 cotS CPE2222 - spore coat protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.