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Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2088 26.42 0 2395188..2396924 - 578 18311070 - CPE2088 - sensor histidine kinase 2089 23.45 -1 2397146..2397823 + 225 18311071 - CPE2089 - hypothetical protein 2090 28.03 0 2398089..2399426 + 445 18311072 fmhB CPE2090 - FemAB family protein 2091 26.80 0 2399789..2400094 + 101 18311073 - CPE2091 - PadR family transcriptional regulator 2092 30.62 0 2400141..2400878 - 245 18311074 - CPE2092 - amino acid ABC transporter 2093 29.42 0 2400897..2402405 - 502 18311075 - CPE2093 - amino acid ABC transporter 2094 27.95 0 2402578..2403357 + 259 18311076 - CPE2094 - hypothetical protein 2095 23.02 -1 2403482..2403898 - 138 18311077 - CPE2095 - hypothetical protein 2096 24.45 -1 2404405..2405226 - 273 18311078 - CPE2096 - hypothetical protein 2097 26.89 0 2405245..2406501 - 418 18311079 - CPE2097 - hypothetical protein 2098 25.05 -1 2406617..2408065 - 482 18311080 virJ CPE2098 - two-component sensor histidine kinase 2099 28.04 0 2408055..2408753 - 232 18311081 virI CPE2099 - two-component response regulator 2100 26.77 0 2408956..2409351 - 131 18311082 - CPE2100 - hypothetical protein 2101 25.77 0 2409484..2409774 - 96 18311083 - CPE2101 - hypothetical protein 2102 28.16 0 2409786..2411543 - 585 18311084 - CPE2102 - helicase domain protein 2103 28.46 0 2411804..2412664 + 286 18311085 - CPE2103 - ribosomal protein L11 methyltransferase 2104 27.91 0 2413069..2413584 - 171 18311086 - CPE2104 - hypothetical protein 2105 25.87 0 2413602..2413976 - 124 18311087 - CPE2105 - hypothetical protein 2106 29.26 0 2413977..2415008 - 343 18311088 apbE CPE2106 - thiamine biosynthesis lipoprotein 2107 27.70 0 2415180..2418425 - 1081 18311089 - CPE2107 - hypothetical protein 2108 25.69 0 2418438..2419484 - 348 18311090 - CPE2108 - hypothetical protein 2109 25.11 -1 2419685..2420134 - 149 18311091 - CPE2109 - hypothetical protein 2110 28.99 0 2420422..2421111 + 229 18311092 - CPE2110 - hypothetical protein 2111 29.66 0 2421136..2421843 + 235 18311093 - CPE2111 - hypothetical protein 2112 30.88 0 2421968..2423722 - 584 18311094 - CPE2112 - subtilase family protein 2113 31.85 0 2423724..2425544 - 606 18311095 - CPE2113 - hypothetical protein 2114 31.42 0 2425791..2427146 - 451 18311096 - CPE2114 - 23S rRNA (uracil-5-)-methyltransferase RumA 2115 27.78 0 2427174..2427623 - 149 18311097 - CPE2115 - hypothetical protein 2116 29.66 0 2427810..2429717 - 635 18311098 selB CPE2116 - selenocysteine-specific translation elongation factor 2117 30.53 0 2429718..2431106 - 462 18311099 selA CPE2117 - selenocysteine synthase 2118 31.04 0 2431123..2431863 - 246 18311100 selD CPE2118 - selenophosphate synthetase 2119 33.33 +1 2431965..2432156 + 63 18311101 - CPE2119 - hypothetical protein 2120 26.95 0 2432199..2432981 - 260 18311102 comEA CPE2120 - ComE operon protein 2121 27.72 0 2433177..2434511 + 444 18311103 dacF CPE2121 - D-alanyl-D-alanine carboxypeptidase 2122 29.88 0 2434543..2435439 - 298 18311104 - CPE2122 - hypothetical protein 2123 28.61 0 2435436..2436749 - 437 18311105 - CPE2123 - membrane-bound protein 2124 28.77 0 2436772..2437341 - 189 18311106 - CPE2124 - HD domain protein 2125 27.09 0 2437344..2437952 - 202 18311107 nadD CPE2125 - nicotinic acid mononucleotide adenylyltransferase 2126 29.04 0 2437954..2438256 - 100 18311108 - CPE2126 - putative RNA-binding protein 2127 35.04 +1 2438274..2439560 - 428 18311109 obgE CPE2127 - GTPase ObgE 2128 36.63 +2 2439728..2440030 - 100 18311110 rpmA CPE2128 - 50S ribosomal protein L27 2129 33.99 +1 2440034..2440339 - 101 18311111 - CPE2129 - hypothetical protein 2130 36.54 +2 2440415..2440726 - 103 18311112 rplU CPE2130 - 50S ribosomal protein L21 2131 26.61 0 2440852..2442294 - 480 18311113 rng CPE2131 - ribonuclease, Rne/Rng family 2132 28.53 0 2442311..2443018 - 235 18311114 - CPE2132 - hypothetical protein 2133 31.66 0 2442996..2444849 - 617 18311115 - CPE2133 - radical SAM domain protein 2134 23.27 -1 2444981..2445835 - 284 18311116 - CPE2134 - peptidase, M50 family 2135 27.16 0 2445832..2446674 - 280 18311117 - CPE2135 - hypothetical protein 2136 31.73 0 2446824..2447948 - 374 18311118 spoVE CPE2136 - cell cycle protein, FtsW/RodA/SpoVE family 2137 28.94 0 2448096..2448368 - 90 18311119 minE CPE2137 - cell division topological specificity factor MinE 2138 31.33 0 2448379..2449176 - 265 18311120 minD CPE2138 - septum site-determining protein MinD 2139 29.09 0 2449205..2449840 - 211 18311121 minC CPE2139 - septum formation inhibitor 2140 30.99 0 2450087..2453158 - 1023 18311122 - CPE2140 - penicillin-binding protein 2 2141 27.11 0 2453167..2453664 - 165 18311123 - CPE2141 - rod shape-determining protein MreD 2142 30.28 0 2453680..2454531 - 283 18311124 mreC CPE2142 - rod shape-determining protein MreC 2143 35.57 +1 2454535..2455563 - 342 18311125 mreB CPE2143 - rod shape-determining protein 2144 31.29 0 2455583..2456266 - 227 18311126 radC CPE2144 - DNA repair protein RadC 2145 30.40 0 2456313..2456891 - 192 18311127 maf CPE2145 - Maf-like protein 2146 28.61 0 2457117..2457920 - 267 18311128 - CPE2146 - hypothetical protein 2147 28.45 0 2458182..2459000 - 272 18311129 - CPE2147 - hypothetical protein 2148 29.89 0 2459328..2460779 - 483 18311130 pepD CPE2148 - aminoacyl-histidine dipeptidase 2149 32.00 0 2460912..2462336 + 474 18311131 pykA CPE2149 - pyruvate kinase 2150 29.02 0 2462453..2463589 - 378 18311132 rpsA CPE2150 - 30S ribosomal protein S1 2151 33.33 +1 2463735..2463938 - 67 18311133 - CPE2151 - heavy metal binding protein 2152 29.28 0 2464043..2464807 - 254 18311134 - CPE2152 - hypothetical protein 2153 27.49 0 2464973..2465383 - 136 18311135 guaB CPE2153 - inosine-5'-monophosphate dehydrogenase 2154 26.25 0 2465469..2466371 - 300 18311136 - CPE2154 - exonuclease family protein 2155 27.75 0 2466626..2468380 - 584 18311137 - CPE2155 - hypothetical protein 2156 27.40 0 2468553..2470340 - 595 18311138 - CPE2156 - mutS domain protein 2157 33.99 +1 2470664..2472193 - 509 18311139 - CPE2157 - PTS system, glucose-specific IIBC component 2158 29.88 0 2472360..2473256 - 298 18311140 - CPE2158 - ABC transporter substrate-binding protein 2159 23.26 -1 2473482..2476250 - 922 18311141 - CPE2159 - hypothetical protein 2160 27.38 0 2476240..2477382 - 380 18311142 - CPE2160 - phosphoesterase 2161 35.52 +1 2477660..2477842 - 60 18311143 - CPE2161 - small acid-soluble protein Ssp1 2162 27.92 0 2477982..2480159 - 725 18311144 cpdC CPE2162 - 2`,3`-cyclic-nucleotide 2`-phosphodiesterase 2163 28.02 0 2480759..2481379 - 206 18311145 - CPE2163 - CBS domain protein 2164 29.25 0 2481679..2482143 + 154 18311146 - CPE2164 - hypothetical protein 2165 30.64 0 2482137..2482841 + 234 18311147 - CPE2165 - glycoprotease family protein 2166 29.08 0 2482841..2483287 + 148 18311148 - CPE2166 - ribosomal-protein-alanine acetyltransferase 2167 30.82 0 2483381..2483977 - 198 18311149 - CPE2167 - hypothetical protein 2168 29.63 0 2484325..2486487 - 720 18311150 - CPE2168 - hypothetical protein 2169 28.27 0 2486599..2487942 + 447 18311151 - CPE2169 - peptidase family protein 2170 32.61 +1 2488191..2489162 - 323 18311152 prfB CPE2170 - peptide chain release factor 2 2171 32.18 0 2489545..2492067 - 840 18311153 secA CPE2171 - preprotein translocase subunit SecA 2172 28.52 0 2492302..2492841 - 179 18311154 - CPE2172 - 30S ribosomal protein S30AE 2173 25.00 -1 2493292..2493951 - 219 18311155 comFC CPE2173 - comFC protein 2174 23.05 -1 2493927..2494889 - 320 18311156 - CPE2174 - hypothetical protein 2175 29.53 0 2494907..2497141 - 744 18311157 recD CPE2175 - helicase, RecD/TraA family 2176 31.93 0 2497278..2498414 + 378 18311158 nagA CPE2176 - N-acetylglucosamine-6-phosphate deacetylase 2177 34.95 +1 2498554..2499729 - 391 161485642 metK CPE2177 - S-adenosylmethionine synthetase 2178 23.88 -1 2500946..2501590 - 214 18311160 - CPE2178 - hypothetical protein 2179 27.68 0 2501696..2502226 + 176 18311161 - CPE2179 - putative sporulation protein YyaC 2180 35.36 +1 2502265..2503302 - 345 18311162 mreV CPE2180 - cell shape determining protein 2181 28.17 0 2503393..2503644 - 83 18311163 spoIIID CPE2181 - stage III sporulation protein D 2182 31.52 0 2503719..2504489 - 256 18311164 - CPE2182 - hypothetical protein 2183 27.76 0 2504606..2505628 - 340 18311165 spoIID CPE2183 - stage II sporulation protein D 2184 31.20 0 2505740..2507005 - 421 18311166 murA CPE2184 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2185 22.02 -2 2507028..2507672 - 214 18311167 - CPE2185 - hypothetical protein 2186 32.09 0 2507854..2508255 - 133 18311168 atpE CPE2186 - F0F1 ATP synthase subunit epsilon 2187 36.55 +2 2508271..2509668 - 465 18311169 atpB CPE2187 - F0F1 ATP synthase subunit beta 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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