version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2030 25.12 -1 2320796..2321623 - 275 18311012 - CPE2030 - hypothetical protein 2031 28.72 0 2321610..2322302 - 230 18311013 - CPE2031 - ABC transporter 2032 36.43 +2 2322479..2323642 - 387 18311014 dnaJ CPE2032 - chaperone protein DnaJ 2033 34.68 +1 2323756..2325615 - 619 18311015 dnaK CPE2033 - chaperone protein DnaK 2034 30.30 0 2325672..2326298 - 208 18311016 grpE CPE2034 - co-chaperone GrpE 2035 29.90 0 2326329..2327348 - 339 18311017 hrcA CPE2035 - heat-inducible transcription repressor 2036 28.31 0 2327545..2328678 - 377 18311018 hemN CPE2036 - coproporphyrinogen III oxidase 2037 24.44 -1 2328948..2329217 - 89 18311019 - CPE2037 - hypothetical protein 2038 33.22 +1 2329405..2331207 - 600 18311020 lepA CPE2038 - GTP-binding protein LepA 2039 23.97 -1 2331328..2331690 - 120 18311021 - CPE2039 - hypothetical protein 2040 29.37 0 2331745..2332830 - 361 18311022 spoIIP CPE2040 - stage II sporulation protein P 2041 34.36 +1 2332979..2333956 - 325 18311023 gpr CPE2041 - germination protease 2042 32.20 0 2334152..2334415 + 87 18311024 rpsT CPE2042 - 30S ribosomal protein S20 2043 25.69 0 2334511..2335557 - 348 18311025 holA CPE2043 - DNA polymerase III subunit delta 2044 25.33 -1 2335601..2337211 - 536 18311026 - CPE2044 - hypothetical protein 2045 33.88 +1 2337263..2337628 - 121 18311027 spoVAE CPE2045 - stage V sporulation protein AE 2046 33.14 +1 2337684..2338703 - 339 18311028 spoVAD CPE2046 - stage V sporulation protein AD 2047 33.33 +1 2338709..2339176 - 155 18311029 spoVAC CPE2047 - stage V sporulation protein AC 2048 30.29 0 2339314..2340069 - 251 18311030 sigF CPE2048 - sporulation sigma factor SigF 2049 30.73 0 2340087..2340509 - 140 18311031 spoIIAB CPE2049 - anti-sigma F factor 2050 27.68 0 2340523..2340858 - 111 18311032 spoIIAA CPE2050 - anti-sigma F factor antagonist 2051 28.22 0 2340992..2343277 - 761 18311033 - CPE2051 - ATP-dependent protease 2052 33.33 +1 2343478..2344152 - 224 18311034 deoC CPE2052 - deoxyribose-phosphate aldolase 2053 27.21 0 2344409..2344816 + 135 18311035 - CPE2053 - hypothetical protein 2054 30.12 0 2345077..2347626 - 849 18311036 - CPE2054 - cation-transporting ATPase 2055 32.55 0 2347871..2349520 + 549 18311037 - CPE2055 - putative manganese-dependent inorganic pyrophosphatase 2056 24.26 -1 2349564..2350070 - 168 18311038 - CPE2056 - hypothetical protein 2057 37.33 +2 2350288..2350662 - 124 18311039 - CPE2057 - hypothetical protein 2058 31.47 0 2350872..2352266 - 464 18311040 - CPE2058 - glutamate decarboxylase 2059 29.55 0 2352852..2353907 - 351 18311041 - CPE2059 - hypothetical protein 2060 32.28 0 2354027..2355445 - 472 18311042 - CPE2060 - glutamate gamma-aminobutyrate antiporter 2061 37.88 +2 2356148..2359663 - 1171 18311043 - CPE2061 - pyruvate-flavodoxin oxidoreductase 2062 31.22 0 2359768..2360193 - 141 18311044 - CPE2062 - flavodoxin 2063 27.75 0 2360400..2361473 - 357 18311045 murG CPE2063 - N-acetylglucosaminyl transferase 2064 33.89 +1 2361658..2361837 + 59 18311046 - CPE2064 - small acid-soluble spore protein C1 2065 30.30 0 2361959..2363737 - 592 18311047 recJ CPE2065 - single-stranded-DNA-specific exonuclease RecJ 2066 26.07 0 2363749..2364960 - 403 18311048 - CPE2066 - peptidase, M16 family 2067 32.82 +1 2365174..2365755 - 193 18311049 - CPE2067 - DJ-1 family protein 2068 30.68 0 2365761..2368700 - 979 18311050 parC CPE2068 - DNA topoisomerase IV subunit A 2069 31.49 0 2368714..2370666 - 650 18311051 parE CPE2069 - DNA topoisomerase IV subunit B 2070 29.88 0 2370650..2371720 - 356 18311052 - CPE2070 - tRNA 2-selenouridine synthase 2071 29.62 0 2371965..2373365 - 466 18311053 - CPE2071 - glycosyl transferase, group 2 family protein 2072 24.94 -1 2374217..2375455 + 412 18311054 - CPE2072 - putative UV damage endonuclease 2073 27.75 0 2375540..2376148 + 202 18311055 - CPE2073 - putative sporulation protein YtaF 2074 32.05 0 2376317..2377486 - 389 18311056 - CPE2074 - trans-2-enoyl-CoA reductase 2075 32.25 0 2377731..2379209 - 492 18311057 - CPE2075 - amino acid permease family protein 2076 30.03 0 2379557..2381797 - 746 18311058 - CPE2076 - alpha-glucosidase 2077 31.54 0 2381846..2382739 - 297 18311059 - CPE2077 - ROK family protein 2078 31.68 0 2382880..2384328 - 482 18311060 - CPE2078 - hypothetical protein 2079 26.26 0 2384713..2385207 + 164 18311061 - CPE2079 - hypothetical protein 2080 30.21 0 2385275..2388409 - 1044 18311062 - CPE2080 - alpha-mannosidase 2081 30.62 0 2388727..2389683 - 318 18311063 - CPE2081 - ABC transporter 2082 29.82 0 2389701..2390669 - 322 18311064 - CPE2082 - ABC transporter 2083 31.03 0 2390899..2391375 - 158 18311065 moaC CPE2083 - molybdenum cofactor biosynthesis protein C 2084 27.25 0 2391414..2392070 - 218 18311066 modB CPE2084 - molybdate ABC transporter permease 2085 28.19 0 2392067..2392843 - 258 18311067 modA CPE2085 - molybdenum ABC transporter 2086 32.32 0 2392828..2393319 - 163 18311068 moaB CPE2086 - molybdenum cofactor synthesis protein 2087 25.26 -1 2393660..2395183 - 507 18311069 - CPE2087 - DNA-binding response regulator, AraC family 2088 26.42 0 2395188..2396924 - 578 18311070 - CPE2088 - sensor histidine kinase 2089 23.45 -1 2397146..2397823 + 225 18311071 - CPE2089 - hypothetical protein 2090 28.03 0 2398089..2399426 + 445 18311072 fmhB CPE2090 - FemAB family protein 2091 26.80 0 2399789..2400094 + 101 18311073 - CPE2091 - PadR family transcriptional regulator 2092 30.62 0 2400141..2400878 - 245 18311074 - CPE2092 - amino acid ABC transporter 2093 29.42 0 2400897..2402405 - 502 18311075 - CPE2093 - amino acid ABC transporter 2094 27.95 0 2402578..2403357 + 259 18311076 - CPE2094 - hypothetical protein 2095 23.02 -1 2403482..2403898 - 138 18311077 - CPE2095 - hypothetical protein 2096 24.45 -1 2404405..2405226 - 273 18311078 - CPE2096 - hypothetical protein 2097 26.89 0 2405245..2406501 - 418 18311079 - CPE2097 - hypothetical protein 2098 25.05 -1 2406617..2408065 - 482 18311080 virJ CPE2098 - two-component sensor histidine kinase 2099 28.04 0 2408055..2408753 - 232 18311081 virI CPE2099 - two-component response regulator 2100 26.77 0 2408956..2409351 - 131 18311082 - CPE2100 - hypothetical protein 2101 25.77 0 2409484..2409774 - 96 18311083 - CPE2101 - hypothetical protein 2102 28.16 0 2409786..2411543 - 585 18311084 - CPE2102 - helicase domain protein 2103 28.46 0 2411804..2412664 + 286 18311085 - CPE2103 - ribosomal protein L11 methyltransferase 2104 27.91 0 2413069..2413584 - 171 18311086 - CPE2104 - hypothetical protein 2105 25.87 0 2413602..2413976 - 124 18311087 - CPE2105 - hypothetical protein 2106 29.26 0 2413977..2415008 - 343 18311088 apbE CPE2106 - thiamine biosynthesis lipoprotein 2107 27.70 0 2415180..2418425 - 1081 18311089 - CPE2107 - hypothetical protein 2108 25.69 0 2418438..2419484 - 348 18311090 - CPE2108 - hypothetical protein 2109 25.11 -1 2419685..2420134 - 149 18311091 - CPE2109 - hypothetical protein 2110 28.99 0 2420422..2421111 + 229 18311092 - CPE2110 - hypothetical protein 2111 29.66 0 2421136..2421843 + 235 18311093 - CPE2111 - hypothetical protein 2112 30.88 0 2421968..2423722 - 584 18311094 - CPE2112 - subtilase family protein 2113 31.85 0 2423724..2425544 - 606 18311095 - CPE2113 - hypothetical protein 2114 31.42 0 2425791..2427146 - 451 18311096 - CPE2114 - 23S rRNA (uracil-5-)-methyltransferase RumA 2115 27.78 0 2427174..2427623 - 149 18311097 - CPE2115 - hypothetical protein 2116 29.66 0 2427810..2429717 - 635 18311098 selB CPE2116 - selenocysteine-specific translation elongation factor 2117 30.53 0 2429718..2431106 - 462 18311099 selA CPE2117 - selenocysteine synthase 2118 31.04 0 2431123..2431863 - 246 18311100 selD CPE2118 - selenophosphate synthetase 2119 33.33 +1 2431965..2432156 + 63 18311101 - CPE2119 - hypothetical protein 2120 26.95 0 2432199..2432981 - 260 18311102 comEA CPE2120 - ComE operon protein 2121 27.72 0 2433177..2434511 + 444 18311103 dacF CPE2121 - D-alanyl-D-alanine carboxypeptidase 2122 29.88 0 2434543..2435439 - 298 18311104 - CPE2122 - hypothetical protein 2123 28.61 0 2435436..2436749 - 437 18311105 - CPE2123 - membrane-bound protein 2124 28.77 0 2436772..2437341 - 189 18311106 - CPE2124 - HD domain protein 2125 27.09 0 2437344..2437952 - 202 18311107 nadD CPE2125 - nicotinic acid mononucleotide adenylyltransferase 2126 29.04 0 2437954..2438256 - 100 18311108 - CPE2126 - putative RNA-binding protein 2127 35.04 +1 2438274..2439560 - 428 18311109 obgE CPE2127 - GTPase ObgE 2128 36.63 +2 2439728..2440030 - 100 18311110 rpmA CPE2128 - 50S ribosomal protein L27 2129 33.99 +1 2440034..2440339 - 101 18311111 - CPE2129 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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