version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1992 29.12 0 2281978..2282523 - 181 18310974 - CPE1992 - hypothetical protein 1993 29.50 0 2282533..2283132 - 199 18310975 coaE CPE1993 - dephospho-CoA kinase 1994 27.87 0 2283149..2285749 - 866 18310976 polA CPE1994 - DNA polymerase I 1995 30.50 0 2286083..2287000 - 305 18310977 - CPE1995 - glutaminase 1996 26.16 0 2287239..2287754 + 171 18310978 - CPE1996 - hypothetical protein 1997 31.07 0 2287837..2289072 + 411 18310979 - CPE1997 - aminopeptidase 1998 25.24 -1 2289285..2290334 - 349 18310980 - CPE1998 - hypothetical protein 1999 32.34 0 2290351..2291361 - 336 18310981 - CPE1999 - hypothetical protein 2000 30.62 0 2292272..2292529 - 85 18310982 - CPE2000 - hypothetical protein 2001 26.23 0 2292691..2293380 - 229 18310983 - CPE2001 - radical SAM domain protein 2002 27.06 0 2293398..2293955 - 185 18310984 - CPE2002 - hypothetical protein 2003 32.01 0 2293974..2294954 - 326 18310985 - CPE2003 - nucleoside hydrolase, IUNH family 2004 29.28 0 2295468..2296256 - 262 18310986 - CPE2004 - hypothetical protein 2005 27.83 0 2296256..2296945 - 229 18310987 - CPE2005 - hypothetical protein 2006 26.13 0 2296959..2297846 - 295 18310988 - CPE2006 - hypothetical protein 2007 32.26 0 2298082..2299203 - 373 18310989 sigA CPE2007 - RNA polymerase sigma factor RpoD 2008 28.75 0 2299209..2300996 - 595 18310990 dnaG CPE2008 - DNA primase 2009 30.90 0 2301165..2302193 - 342 18310991 dgtP CPE2009 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 2010 25.74 0 2302395..2303474 + 359 18310992 cotS CPE2010 - spore coat protein 2011 33.75 +1 2303526..2306156 - 876 18310993 podK CPE2011 - pyruvate phosphate dikinase 2012 33.65 +1 2306257..2306889 - 210 18310994 - CPE2012 - CBS domain protein 2013 30.78 0 2307094..2307720 - 208 18310995 - CPE2013 - hypothetical protein 2014 28.02 0 2307726..2308403 - 225 18310996 recO CPE2014 - DNA repair protein RecO 2015 28.62 0 2308479..2309369 - 296 18310997 era CPE2015 - GTP-binding protein Era 2016 31.08 0 2309378..2309776 - 132 18310998 - CPE2016 - cytidine deaminase 2017 31.04 0 2309820..2310518 - 232 18310999 dgkA CPE2017 - diacylglycerol kinase/PAP2 family protein 2018 29.98 0 2310546..2311052 - 168 18311000 - CPE2018 - putative metalloprotease 2019 29.83 0 2311054..2313108 - 684 18311001 - CPE2019 - hypothetical protein 2020 28.23 0 2313145..2314281 - 378 18311002 spoIV CPE2020 - stage IV sporulation protein 2021 28.72 0 2314283..2314564 - 93 18311003 - CPE2021 - sporulation protein YqfC 2022 36.22 +2 2314789..2315238 - 149 18311004 - CPE2022 - GatB/Yqey domain protein 2023 34.46 +1 2315288..2315464 - 58 18311005 rpsU CPE2023 - 30S ribosomal protein S21 2024 34.20 +1 2315584..2315928 - 114 18311006 - CPE2024 - HIT family protein 2025 30.80 0 2315997..2317301 - 434 18311007 - CPE2025 - MiaB-like tRNA modifying protein 2026 31.47 0 2317301..2318053 - 250 18311008 - CPE2026 - hypothetical protein 2027 33.23 +1 2318076..2319017 - 313 18311009 prmA CPE2027 - ribosomal protein L11 methyltransferase 2028 28.57 0 2319244..2319600 - 118 18311010 - CPE2028 - GntR family transcriptional regulator 2029 25.19 -1 2319602..2320780 - 392 18311011 - CPE2029 - hypothetical protein 2030 25.12 -1 2320796..2321623 - 275 18311012 - CPE2030 - hypothetical protein 2031 28.72 0 2321610..2322302 - 230 18311013 - CPE2031 - ABC transporter 2032 36.43 +2 2322479..2323642 - 387 18311014 dnaJ CPE2032 - chaperone protein DnaJ 2033 34.68 +1 2323756..2325615 - 619 18311015 dnaK CPE2033 - chaperone protein DnaK 2034 30.30 0 2325672..2326298 - 208 18311016 grpE CPE2034 - co-chaperone GrpE 2035 29.90 0 2326329..2327348 - 339 18311017 hrcA CPE2035 - heat-inducible transcription repressor 2036 28.31 0 2327545..2328678 - 377 18311018 hemN CPE2036 - coproporphyrinogen III oxidase 2037 24.44 -1 2328948..2329217 - 89 18311019 - CPE2037 - hypothetical protein 2038 33.22 +1 2329405..2331207 - 600 18311020 lepA CPE2038 - GTP-binding protein LepA 2039 23.97 -1 2331328..2331690 - 120 18311021 - CPE2039 - hypothetical protein 2040 29.37 0 2331745..2332830 - 361 18311022 spoIIP CPE2040 - stage II sporulation protein P 2041 34.36 +1 2332979..2333956 - 325 18311023 gpr CPE2041 - germination protease 2042 32.20 0 2334152..2334415 + 87 18311024 rpsT CPE2042 - 30S ribosomal protein S20 2043 25.69 0 2334511..2335557 - 348 18311025 holA CPE2043 - DNA polymerase III subunit delta 2044 25.33 -1 2335601..2337211 - 536 18311026 - CPE2044 - hypothetical protein 2045 33.88 +1 2337263..2337628 - 121 18311027 spoVAE CPE2045 - stage V sporulation protein AE 2046 33.14 +1 2337684..2338703 - 339 18311028 spoVAD CPE2046 - stage V sporulation protein AD 2047 33.33 +1 2338709..2339176 - 155 18311029 spoVAC CPE2047 - stage V sporulation protein AC 2048 30.29 0 2339314..2340069 - 251 18311030 sigF CPE2048 - sporulation sigma factor SigF 2049 30.73 0 2340087..2340509 - 140 18311031 spoIIAB CPE2049 - anti-sigma F factor 2050 27.68 0 2340523..2340858 - 111 18311032 spoIIAA CPE2050 - anti-sigma F factor antagonist 2051 28.22 0 2340992..2343277 - 761 18311033 - CPE2051 - ATP-dependent protease 2052 33.33 +1 2343478..2344152 - 224 18311034 deoC CPE2052 - deoxyribose-phosphate aldolase 2053 27.21 0 2344409..2344816 + 135 18311035 - CPE2053 - hypothetical protein 2054 30.12 0 2345077..2347626 - 849 18311036 - CPE2054 - cation-transporting ATPase 2055 32.55 0 2347871..2349520 + 549 18311037 - CPE2055 - putative manganese-dependent inorganic pyrophosphatase 2056 24.26 -1 2349564..2350070 - 168 18311038 - CPE2056 - hypothetical protein 2057 37.33 +2 2350288..2350662 - 124 18311039 - CPE2057 - hypothetical protein 2058 31.47 0 2350872..2352266 - 464 18311040 - CPE2058 - glutamate decarboxylase 2059 29.55 0 2352852..2353907 - 351 18311041 - CPE2059 - hypothetical protein 2060 32.28 0 2354027..2355445 - 472 18311042 - CPE2060 - glutamate gamma-aminobutyrate antiporter 2061 37.88 +2 2356148..2359663 - 1171 18311043 - CPE2061 - pyruvate-flavodoxin oxidoreductase 2062 31.22 0 2359768..2360193 - 141 18311044 - CPE2062 - flavodoxin 2063 27.75 0 2360400..2361473 - 357 18311045 murG CPE2063 - N-acetylglucosaminyl transferase 2064 33.89 +1 2361658..2361837 + 59 18311046 - CPE2064 - small acid-soluble spore protein C1 2065 30.30 0 2361959..2363737 - 592 18311047 recJ CPE2065 - single-stranded-DNA-specific exonuclease RecJ 2066 26.07 0 2363749..2364960 - 403 18311048 - CPE2066 - peptidase, M16 family 2067 32.82 +1 2365174..2365755 - 193 18311049 - CPE2067 - DJ-1 family protein 2068 30.68 0 2365761..2368700 - 979 18311050 parC CPE2068 - DNA topoisomerase IV subunit A 2069 31.49 0 2368714..2370666 - 650 18311051 parE CPE2069 - DNA topoisomerase IV subunit B 2070 29.88 0 2370650..2371720 - 356 18311052 - CPE2070 - tRNA 2-selenouridine synthase 2071 29.62 0 2371965..2373365 - 466 18311053 - CPE2071 - glycosyl transferase, group 2 family protein 2072 24.94 -1 2374217..2375455 + 412 18311054 - CPE2072 - putative UV damage endonuclease 2073 27.75 0 2375540..2376148 + 202 18311055 - CPE2073 - putative sporulation protein YtaF 2074 32.05 0 2376317..2377486 - 389 18311056 - CPE2074 - trans-2-enoyl-CoA reductase 2075 32.25 0 2377731..2379209 - 492 18311057 - CPE2075 - amino acid permease family protein 2076 30.03 0 2379557..2381797 - 746 18311058 - CPE2076 - alpha-glucosidase 2077 31.54 0 2381846..2382739 - 297 18311059 - CPE2077 - ROK family protein 2078 31.68 0 2382880..2384328 - 482 18311060 - CPE2078 - hypothetical protein 2079 26.26 0 2384713..2385207 + 164 18311061 - CPE2079 - hypothetical protein 2080 30.21 0 2385275..2388409 - 1044 18311062 - CPE2080 - alpha-mannosidase 2081 30.62 0 2388727..2389683 - 318 18311063 - CPE2081 - ABC transporter 2082 29.82 0 2389701..2390669 - 322 18311064 - CPE2082 - ABC transporter 2083 31.03 0 2390899..2391375 - 158 18311065 moaC CPE2083 - molybdenum cofactor biosynthesis protein C 2084 27.25 0 2391414..2392070 - 218 18311066 modB CPE2084 - molybdate ABC transporter permease 2085 28.19 0 2392067..2392843 - 258 18311067 modA CPE2085 - molybdenum ABC transporter 2086 32.32 0 2392828..2393319 - 163 18311068 moaB CPE2086 - molybdenum cofactor synthesis protein 2087 25.26 -1 2393660..2395183 - 507 18311069 - CPE2087 - DNA-binding response regulator, AraC family 2088 26.42 0 2395188..2396924 - 578 18311070 - CPE2088 - sensor histidine kinase 2089 23.45 -1 2397146..2397823 + 225 18311071 - CPE2089 - hypothetical protein 2090 28.03 0 2398089..2399426 + 445 18311072 fmhB CPE2090 - FemAB family protein 2091 26.80 0 2399789..2400094 + 101 18311073 - CPE2091 - PadR family transcriptional regulator 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.