version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1919 33.64 +1 2198991..2201633 - 880 18310901 valS CPE1919 - valyl-tRNA synthetase 1920 25.93 0 2202293..2202643 + 116 18310902 - CPE1920 - tetratricopeptide repeat protein 1921 19.75 -2 2202701..2202862 - 53 18310903 - CPE1921 - hypothetical protein 1922 27.72 0 2202849..2204024 - 391 18310904 - CPE1922 - transglutaminase domain protein 1923 25.67 -1 2204030..2204668 - 212 18310905 recX CPE1923 - recombination regulator RecX 1924 28.35 0 2204674..2205918 - 414 18310906 - CPE1924 - peptidase, M16 family 1925 28.32 0 2205887..2206684 + 265 18310907 - CPE1925 - DNA-binding response regulator 1926 27.62 0 2206684..2208207 + 507 18310908 - CPE1926 - sensor histidine kinase 1927 32.53 0 2208522..2209268 - 248 18310909 fabG CPE1927 - 3-ketoacyl-(acyl-carrier-protein) reductase 1928 27.96 0 2209361..2210347 - 328 18310910 - CPE1928 - dipeptidase family protein 1929 31.47 0 2210573..2211805 - 410 18310911 glyA CPE1929 - serine hydroxymethyltransferase 1930 32.94 +1 2211985..2212755 + 256 18310912 - CPE1930 - hypothetical protein 1931 29.69 0 2212756..2213277 + 173 18310913 - CPE1931 - hypothetical protein 1932 30.04 0 2213295..2213567 - 90 18310914 - CPE1932 - hypothetical protein 1933 32.27 0 2213854..2215647 - 597 18310915 aspS CPE1933 - aspartyl-tRNA synthetase 1934 31.73 0 2215668..2216915 - 415 18310916 hisS CPE1934 - histidyl-tRNA synthetase 1935 28.48 0 2216947..2218389 - 480 18310917 hemZ CPE1935 - coproporphyrinogen III oxidase 1936 30.27 0 2218379..2218999 - 206 18310918 - CPE1936 - metallo-beta-lactamase family protein 1937 32.89 +1 2219159..2219608 - 149 18310919 - CPE1937 - D-tyrosyl-tRNA deacylase 1938 29.80 0 2219623..2221803 - 726 18310920 relA CPE1938 - GTP pyrophosphokinase 1939 34.10 +1 2221955..2222473 - 172 18310921 apt CPE1939 - adenine phosphoribosyltransferase 1940 26.55 0 2222518..2223372 - 284 18310922 - CPE1940 - DHH domain protein 1941 28.62 0 2223573..2224442 - 289 18310923 secF CPE1941 - preprotein translocase subunit SecF 1942 31.75 0 2224435..2225694 - 419 18310924 secD CPE1942 - preprotein translocase subunit SecD 1943 31.15 0 2225792..2227165 - 457 18310925 - CPE1943 - astB/chuR-related protein 1944 27.41 0 2227570..2227839 - 89 18310926 yajC CPE1944 - preprotein translocase subunit YajC 1945 32.72 +1 2227878..2229020 - 380 18310927 tgt CPE1945 - queuine tRNA-ribosyltransferase 1946 29.82 0 2229044..2230069 - 341 18310928 queA CPE1946 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1947 32.95 +1 2230091..2231131 - 346 18310929 ruvB CPE1947 - Holliday junction DNA helicase B 1948 29.70 0 2231145..2231750 - 201 18310930 ruvA CPE1948 - Holliday junction DNA helicase motor protein 1949 26.26 0 2231978..2232571 - 197 18310931 - CPE1949 - hypothetical protein 1950 32.43 0 2232719..2236264 - 1181 18310932 cpdB CPE1950 - 2', 3'-cyclic nucleotide 2'-phosphodiesterase 1951 31.47 0 2236515..2240162 - 1215 18310933 cpdA CPE1951 - 2', 3'-cyclic nucleotide 2'-phosphodiesterase 1952 26.23 0 2240411..2241409 - 332 18310934 ptp CPE1952 - hypothetical protein 1953 28.97 0 2241885..2242319 - 144 18310935 - CPE1953 - hemoglobin 1954 35.91 +1 2242745..2243482 - 245 18310936 - CPE1954 - hypothetical protein 1955 32.26 0 2243608..2244261 - 217 18310937 - CPE1955 - hypothetical protein 1956 26.51 0 2244267..2245673 - 468 18310938 - CPE1956 - GntR family transcriptional regulator/aminotransferase 1957 26.36 0 2245688..2246590 - 300 18310939 - CPE1957 - nucleotidyltransferase domain protein 1958 32.07 0 2246632..2247105 - 157 18310940 - CPE1958 - hypothetical protein 1959 30.38 0 2247237..2249030 - 597 18310941 hflX CPE1959 - GTP binding protein 1960 29.14 0 2249137..2249661 + 174 18310942 hprT CPE1960 - hypoxanthine phosphoribosyltransferase 1961 26.67 0 2249695..2250384 - 229 18310943 - CPE1961 - sporulation protein YunB 1962 32.21 0 2250521..2252560 + 679 18310944 pbpA CPE1962 - penicillin-binding proteins 1A/1B 1963 31.72 0 2252578..2253012 + 144 18310945 - CPE1963 - hypothetical protein 1964 32.19 0 2253306..2254706 + 466 18310946 - CPE1964 - amino acid carrier protein 1965 24.94 -1 2254743..2255135 - 130 18310947 - CPE1965 - hypothetical protein 1966 28.21 0 2255183..2256157 - 324 18310948 - CPE1966 - GNAT family acetyltransferase 1967 32.96 +1 2256585..2257124 + 179 18310949 - CPE1967 - DNA-binding protein 1968 30.10 0 2257156..2258205 + 349 18310950 potA CPE1968 - spermidine/putrescine ABC transporter 1969 29.08 0 2258208..2259053 + 281 18310951 potB CPE1969 - spermidine/putrescine ABC transporter 1970 29.71 0 2259047..2259847 + 266 18310952 potC CPE1970 - spermidine/putrescine ABC transporter 1971 30.56 0 2259849..2260931 + 360 18310953 potD CPE1971 - spermidine/putrescine ABC transporter 1972 30.09 0 2260966..2261397 - 143 18310954 ndk CPE1972 - nucleoside diphosphate kinase 1973 30.37 0 2261582..2261851 + 89 18310955 - CPE1973 - acylphosphatase 1974 23.72 -1 2261991..2262146 - 51 18310956 - CPE1974 - hypothetical protein 1975 25.93 0 2262316..2262882 - 188 18310957 - CPE1975 - hypothetical protein 1976 30.97 0 2263061..2264332 + 423 18310958 dacF CPE1976 - D-alanyl-D-alanine carboxypeptidase 1977 29.92 0 2264387..2265031 - 214 18310959 - CPE1977 - pyrophosphatase PpaX 1978 30.76 0 2265621..2266631 + 336 18310960 asnA CPE1978 - asparagine synthetase AsnA 1979 24.30 -1 2266757..2267575 + 272 18310961 - CPE1979 - hypothetical protein 1980 28.57 0 2267687..2268064 + 125 18310962 - CPE1980 - lrgA family protein 1981 31.93 0 2268057..2268767 + 236 18310963 - CPE1981 - lrgB-like family protein 1982 24.78 -1 2268864..2269319 + 151 18310964 - CPE1982 - hypothetical protein 1983 30.61 0 2269532..2271694 - 720 18310965 topB CPE1983 - DNA topoisomerase 1984 32.73 +1 2271934..2273091 - 385 18310966 - CPE1984 - hypothetical protein 1985 27.42 0 2273254..2273760 - 168 18310967 - CPE1985 - TspO/MBR family protein 1986 22.24 -1 2273797..2275833 - 678 18310968 - CPE1986 - sensor histidine kinase 1987 22.10 -2 2275823..2277709 - 628 18310969 - CPE1987 - sensor histidine kinase 1988 27.67 0 2277830..2278765 - 311 18310970 - CPE1988 - tetratricopeptide repeat protein 1989 29.64 0 2278886..2279806 - 306 18310971 - CPE1989 - hydrolase, alpha/beta fold family 1990 25.96 0 2279929..2280525 - 198 18310972 - CPE1990 - hypothetical protein 1991 27.14 0 2280811..2281941 - 376 18310973 - CPE1991 - hypothetical protein 1992 29.12 0 2281978..2282523 - 181 18310974 - CPE1992 - hypothetical protein 1993 29.50 0 2282533..2283132 - 199 18310975 coaE CPE1993 - dephospho-CoA kinase 1994 27.87 0 2283149..2285749 - 866 18310976 polA CPE1994 - DNA polymerase I 1995 30.50 0 2286083..2287000 - 305 18310977 - CPE1995 - glutaminase 1996 26.16 0 2287239..2287754 + 171 18310978 - CPE1996 - hypothetical protein 1997 31.07 0 2287837..2289072 + 411 18310979 - CPE1997 - aminopeptidase 1998 25.24 -1 2289285..2290334 - 349 18310980 - CPE1998 - hypothetical protein 1999 32.34 0 2290351..2291361 - 336 18310981 - CPE1999 - hypothetical protein 2000 30.62 0 2292272..2292529 - 85 18310982 - CPE2000 - hypothetical protein 2001 26.23 0 2292691..2293380 - 229 18310983 - CPE2001 - radical SAM domain protein 2002 27.06 0 2293398..2293955 - 185 18310984 - CPE2002 - hypothetical protein 2003 32.01 0 2293974..2294954 - 326 18310985 - CPE2003 - nucleoside hydrolase, IUNH family 2004 29.28 0 2295468..2296256 - 262 18310986 - CPE2004 - hypothetical protein 2005 27.83 0 2296256..2296945 - 229 18310987 - CPE2005 - hypothetical protein 2006 26.13 0 2296959..2297846 - 295 18310988 - CPE2006 - hypothetical protein 2007 32.26 0 2298082..2299203 - 373 18310989 sigA CPE2007 - RNA polymerase sigma factor RpoD 2008 28.75 0 2299209..2300996 - 595 18310990 dnaG CPE2008 - DNA primase 2009 30.90 0 2301165..2302193 - 342 18310991 dgtP CPE2009 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 2010 25.74 0 2302395..2303474 + 359 18310992 cotS CPE2010 - spore coat protein 2011 33.75 +1 2303526..2306156 - 876 18310993 podK CPE2011 - pyruvate phosphate dikinase 2012 33.65 +1 2306257..2306889 - 210 18310994 - CPE2012 - CBS domain protein 2013 30.78 0 2307094..2307720 - 208 18310995 - CPE2013 - hypothetical protein 2014 28.02 0 2307726..2308403 - 225 18310996 recO CPE2014 - DNA repair protein RecO 2015 28.62 0 2308479..2309369 - 296 18310997 era CPE2015 - GTP-binding protein Era 2016 31.08 0 2309378..2309776 - 132 18310998 - CPE2016 - cytidine deaminase 2017 31.04 0 2309820..2310518 - 232 18310999 dgkA CPE2017 - diacylglycerol kinase/PAP2 family protein 2018 29.98 0 2310546..2311052 - 168 18311000 - CPE2018 - putative metalloprotease 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.