version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1875 31.13 0 2145801..2150240 - 1479 18310857 - CPE1875 - hypothetical protein 1876 32.22 0 2150418..2152670 - 750 18310858 - CPE1876 - hypothetical protein 1877 24.41 -1 2152894..2153610 - 238 18310859 glpQ CPE1877 - glycerophosphodiester phosphodiesterase 1878 34.02 +1 2153614..2154636 - 340 18310860 - CPE1878 - glycolate oxidase 1879 32.21 0 2154650..2155093 - 147 18310861 - CPE1879 - hypothetical protein 1880 31.41 0 2155331..2157514 - 727 18310862 spoVD CPE1880 - stage V sporulation protein D 1881 32.06 0 2157777..2160137 - 786 18310863 mutS2 CPE1881 - recombination and DNA strand exchange inhibitor protein 1882 28.93 0 2160151..2162511 - 786 18310864 - CPE1882 - peptidase, U32 family 1883 27.00 0 2162901..2163689 + 262 18310865 - CPE1883 - hypothetical protein 1884 25.52 -1 2163776..2165131 - 451 18310866 - CPE1884 - hypothetical protein 1885 31.15 0 2165212..2167593 - 793 18310867 pheT CPE1885 - phenylalanyl-tRNA synthetase subunit beta 1886 32.16 0 2167617..2168642 - 341 18310868 pheS CPE1886 - phenylalanyl-tRNA synthetase subunit alpha 1887 30.04 0 2169225..2170379 - 384 18310869 - CPE1887 - transposase 1888 28.49 0 2170390..2170761 - 123 18310870 - CPE1888 - transposase 1889 28.29 0 2171082..2171855 - 257 18310871 - CPE1889 - RNA methyltransferase, TrmH family 1890 30.18 0 2171881..2172546 - 221 18310872 trkA CPE1890 - potassium uptake system protein 1891 29.98 0 2172569..2173909 - 446 18310873 trkB CPE1891 - potassium uptake protein, TrkH family 1892 32.50 0 2174138..2174497 - 119 18310874 rplT CPE1892 - 50S ribosomal protein L20 1893 31.31 0 2174527..2174724 - 65 18310875 rpmI CPE1893 - 50S ribosomal protein L35 1894 32.59 0 2174746..2175150 - 134 18310876 infC CPE1894 - translation initiation factor IF-3 1895 22.64 -1 2175549..2176427 - 292 18310877 - CPE1895 - putative sporulation protein YtxC 1896 25.43 -1 2176562..2177257 + 231 18310878 - CPE1896 - hypothetical protein 1897 30.28 0 2177512..2178492 + 326 18310879 - CPE1897 - BadF/BadG/BcrA/BcrD ATPase family protein 1898 28.65 0 2178625..2179179 - 184 18310880 - CPE1898 - hypothetical protein 1899 21.62 -2 2179345..2179899 - 184 18310881 - CPE1899 - hypothetical protein 1900 24.34 -1 2180198..2180575 + 125 18310882 - CPE1900 - hypothetical protein 1901 30.42 0 2181056..2182015 - 319 18310883 hslO CPE1901 - Hsp33-like chaperonin 1902 26.69 0 2182031..2182768 - 245 18310884 - CPE1902 - hypothetical protein 1903 30.77 0 2182820..2183092 - 90 18310885 - CPE1903 - small acid-soluble spore protein beta 1904 31.49 0 2183294..2184271 + 325 18310886 asd CPE1904 - aspartate-semialdehyde dehydrogenase 1905 28.88 0 2184296..2185171 + 291 18310887 dapA CPE1905 - dihydrodipicolinate synthase 1906 29.93 0 2185244..2186008 + 254 18310888 dapB CPE1906 - dihydrodipicolinate reductase 1907 29.13 0 2186304..2187446 - 380 18310889 patA CPE1907 - asparate aminotransferase 1908 32.77 +1 2187446..2187982 - 178 18310890 - CPE1908 - cob(I)alamin adenosyltransferase 1909 33.90 +1 2188176..2188886 + 236 18310891 dapD CPE1909 - tetrahydrodipicolinate succinylase 1910 27.85 0 2188936..2189592 - 218 18310892 - CPE1910 - single-strand DNA-binding protein 1911 26.13 0 2189708..2190484 - 258 18310893 - CPE1911 - polysaccharide deacetylase family protein 1912 25.05 -1 2190592..2191122 + 176 18310894 - CPE1912 - hypothetical protein 1913 27.10 0 2191188..2192294 + 368 18310895 - CPE1913 - hypothetical protein 1914 28.20 0 2192466..2193887 + 473 18310896 - CPE1914 - PBP 5 synthesis repressor 1915 28.19 0 2193942..2194583 - 213 18310897 hlyE CPE1915 - hemolysin III 1916 29.90 0 2194709..2195203 + 164 18310898 - CPE1916 - hypothetical protein 1917 29.74 0 2195318..2196877 - 519 18310899 - CPE1917 - hypothetical protein 1918 29.33 0 2196988..2198310 - 440 18310900 folC CPE1918 - FolC bifunctional protein 1919 33.64 +1 2198991..2201633 - 880 18310901 valS CPE1919 - valyl-tRNA synthetase 1920 25.93 0 2202293..2202643 + 116 18310902 - CPE1920 - tetratricopeptide repeat protein 1921 19.75 -2 2202701..2202862 - 53 18310903 - CPE1921 - hypothetical protein 1922 27.72 0 2202849..2204024 - 391 18310904 - CPE1922 - transglutaminase domain protein 1923 25.67 -1 2204030..2204668 - 212 18310905 recX CPE1923 - recombination regulator RecX 1924 28.35 0 2204674..2205918 - 414 18310906 - CPE1924 - peptidase, M16 family 1925 28.32 0 2205887..2206684 + 265 18310907 - CPE1925 - DNA-binding response regulator 1926 27.62 0 2206684..2208207 + 507 18310908 - CPE1926 - sensor histidine kinase 1927 32.53 0 2208522..2209268 - 248 18310909 fabG CPE1927 - 3-ketoacyl-(acyl-carrier-protein) reductase 1928 27.96 0 2209361..2210347 - 328 18310910 - CPE1928 - dipeptidase family protein 1929 31.47 0 2210573..2211805 - 410 18310911 glyA CPE1929 - serine hydroxymethyltransferase 1930 32.94 +1 2211985..2212755 + 256 18310912 - CPE1930 - hypothetical protein 1931 29.69 0 2212756..2213277 + 173 18310913 - CPE1931 - hypothetical protein 1932 30.04 0 2213295..2213567 - 90 18310914 - CPE1932 - hypothetical protein 1933 32.27 0 2213854..2215647 - 597 18310915 aspS CPE1933 - aspartyl-tRNA synthetase 1934 31.73 0 2215668..2216915 - 415 18310916 hisS CPE1934 - histidyl-tRNA synthetase 1935 28.48 0 2216947..2218389 - 480 18310917 hemZ CPE1935 - coproporphyrinogen III oxidase 1936 30.27 0 2218379..2218999 - 206 18310918 - CPE1936 - metallo-beta-lactamase family protein 1937 32.89 +1 2219159..2219608 - 149 18310919 - CPE1937 - D-tyrosyl-tRNA deacylase 1938 29.80 0 2219623..2221803 - 726 18310920 relA CPE1938 - GTP pyrophosphokinase 1939 34.10 +1 2221955..2222473 - 172 18310921 apt CPE1939 - adenine phosphoribosyltransferase 1940 26.55 0 2222518..2223372 - 284 18310922 - CPE1940 - DHH domain protein 1941 28.62 0 2223573..2224442 - 289 18310923 secF CPE1941 - preprotein translocase subunit SecF 1942 31.75 0 2224435..2225694 - 419 18310924 secD CPE1942 - preprotein translocase subunit SecD 1943 31.15 0 2225792..2227165 - 457 18310925 - CPE1943 - astB/chuR-related protein 1944 27.41 0 2227570..2227839 - 89 18310926 yajC CPE1944 - preprotein translocase subunit YajC 1945 32.72 +1 2227878..2229020 - 380 18310927 tgt CPE1945 - queuine tRNA-ribosyltransferase 1946 29.82 0 2229044..2230069 - 341 18310928 queA CPE1946 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1947 32.95 +1 2230091..2231131 - 346 18310929 ruvB CPE1947 - Holliday junction DNA helicase B 1948 29.70 0 2231145..2231750 - 201 18310930 ruvA CPE1948 - Holliday junction DNA helicase motor protein 1949 26.26 0 2231978..2232571 - 197 18310931 - CPE1949 - hypothetical protein 1950 32.43 0 2232719..2236264 - 1181 18310932 cpdB CPE1950 - 2', 3'-cyclic nucleotide 2'-phosphodiesterase 1951 31.47 0 2236515..2240162 - 1215 18310933 cpdA CPE1951 - 2', 3'-cyclic nucleotide 2'-phosphodiesterase 1952 26.23 0 2240411..2241409 - 332 18310934 ptp CPE1952 - hypothetical protein 1953 28.97 0 2241885..2242319 - 144 18310935 - CPE1953 - hemoglobin 1954 35.91 +1 2242745..2243482 - 245 18310936 - CPE1954 - hypothetical protein 1955 32.26 0 2243608..2244261 - 217 18310937 - CPE1955 - hypothetical protein 1956 26.51 0 2244267..2245673 - 468 18310938 - CPE1956 - GntR family transcriptional regulator/aminotransferase 1957 26.36 0 2245688..2246590 - 300 18310939 - CPE1957 - nucleotidyltransferase domain protein 1958 32.07 0 2246632..2247105 - 157 18310940 - CPE1958 - hypothetical protein 1959 30.38 0 2247237..2249030 - 597 18310941 hflX CPE1959 - GTP binding protein 1960 29.14 0 2249137..2249661 + 174 18310942 hprT CPE1960 - hypoxanthine phosphoribosyltransferase 1961 26.67 0 2249695..2250384 - 229 18310943 - CPE1961 - sporulation protein YunB 1962 32.21 0 2250521..2252560 + 679 18310944 pbpA CPE1962 - penicillin-binding proteins 1A/1B 1963 31.72 0 2252578..2253012 + 144 18310945 - CPE1963 - hypothetical protein 1964 32.19 0 2253306..2254706 + 466 18310946 - CPE1964 - amino acid carrier protein 1965 24.94 -1 2254743..2255135 - 130 18310947 - CPE1965 - hypothetical protein 1966 28.21 0 2255183..2256157 - 324 18310948 - CPE1966 - GNAT family acetyltransferase 1967 32.96 +1 2256585..2257124 + 179 18310949 - CPE1967 - DNA-binding protein 1968 30.10 0 2257156..2258205 + 349 18310950 potA CPE1968 - spermidine/putrescine ABC transporter 1969 29.08 0 2258208..2259053 + 281 18310951 potB CPE1969 - spermidine/putrescine ABC transporter 1970 29.71 0 2259047..2259847 + 266 18310952 potC CPE1970 - spermidine/putrescine ABC transporter 1971 30.56 0 2259849..2260931 + 360 18310953 potD CPE1971 - spermidine/putrescine ABC transporter 1972 30.09 0 2260966..2261397 - 143 18310954 ndk CPE1972 - nucleoside diphosphate kinase 1973 30.37 0 2261582..2261851 + 89 18310955 - CPE1973 - acylphosphatase 1974 23.72 -1 2261991..2262146 - 51 18310956 - CPE1974 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0