version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 139 29.09 0 179861..180331 + 156 18309121 - CPE0139 - transposase 140 26.61 0 180609..182378 + 589 18309122 - CPE0140 - hypothetical protein 141 27.78 0 182398..182559 - 53 18309123 - CPE0141 - hypothetical protein 142 26.85 0 182670..182885 + 71 18309124 - CPE0142 - hypothetical protein 143 23.61 -1 182876..183235 + 119 18309125 - CPE0143 - hypothetical protein 144 28.26 0 183767..184318 + 183 18309126 - CPE0144 - hypothetical protein 145 27.66 0 184608..185453 + 281 18309127 - CPE0145 - hypothetical protein 146 27.29 0 185482..186507 + 341 18309128 - CPE0146 - 2-keto-3-deoxygluconate kinase 147 30.44 0 186571..188370 + 599 18309129 bglR CPE0147 - beta-D-glucuronidase 148 24.78 -1 188513..189202 + 229 18309130 - CPE0148 - transcriptional regulator 149 32.75 +1 189392..190243 + 283 18309131 - CPE0149 - D-mannonate oxidoreductase 150 33.83 +1 190258..190866 + 202 18309132 - CPE0150 - 2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-ox oglutarate aldolase 151 31.43 0 190957..192009 + 350 18309133 uxuA CPE0151 - mannonate dehydratase 152 28.69 0 192029..193429 + 466 18309134 uxaC CPE0152 - glucuronate isomerase 153 30.75 0 193550..194941 + 463 18309135 uidB CPE0153 - glucuronide permease 154 32.71 +1 195005..196774 + 589 18309136 - CPE0154 - beta-hexosamidase A 155 28.36 0 197405..199576 + 723 18309137 - CPE0155 - hypothetical protein 156 29.89 0 199580..201148 + 522 18309138 - CPE0156 - putative surface protein 157 26.59 0 201393..202148 + 251 18309139 - CPE0157 - sortase 158 28.62 0 202217..203128 + 303 18309140 - CPE0158 - hypothetical protein 159 31.82 0 203688..204281 + 197 18309141 - CPE0159 - hypothetical protein 160 32.25 0 204516..205067 + 183 18309142 - CPE0160 - hypothetical protein 161 22.22 -1 205272..206738 - 488 18309143 - CPE0161 - hypothetical protein 162 34.98 +1 207408..208439 + 343 18309144 pfoR CPE0162 - regulatory protein 163 30.74 0 209028..210530 + 500 18309145 pfoA CPE0163 - perfringolysin O 164 27.45 0 210726..211184 + 152 18309146 - CPE0164 - hypothetical protein 165 29.17 0 211256..211423 + 55 18309147 - CPE0165 - hypothetical protein 166 32.06 0 212226..213713 + 495 18309148 - CPE0166 - membrane-spanning transporter protein 167 34.73 +1 213872..215941 + 689 18309149 pbg CPE0167 - beta-galactosidase 168 31.08 0 216493..217734 + 413 18309150 arcA CPE0168 - arginine deiminase 169 32.33 0 217842..218837 + 331 18309151 arcB CPE0169 - ornithine carbamoyltransferase 170 33.33 +1 218982..220418 + 478 18309152 arcD CPE0170 - arginine/ornithine antiporter 171 33.86 +1 220479..221423 + 314 18309153 arcC CPE0171 - carbamate kinase 172 28.73 0 221496..221951 + 151 18309154 argR CPE0172 - arginine repressor 173 29.38 0 222495..225809 + 1104 18309155 colA CPE0173 - collagenase 174 29.41 0 225957..226415 - 152 18309156 mscL CPE0174 - large-conductance mechanosensitive channel 175 31.94 0 227207..227782 + 191 18309157 ycgJ CPE0175 - methyltransferase, UbiE/COQ5 family 176 30.74 0 227846..229000 + 384 18309158 metB CPE0176 - cystathionine beta-lyase 177 30.47 0 228987..229895 + 302 18309159 cysK CPE0177 - cysteine synthase family protein 178 30.48 0 229993..230448 + 151 18309160 luxS CPE0178 - S-ribosylhomocysteinase 179 28.88 0 231156..232166 + 336 18309161 lipA CPE0179 - lipase 180 31.82 0 232388..233179 - 263 18309162 - CPE0180 - hypothetical protein 181 27.59 0 233184..234002 - 272 18309163 - CPE0181 - hypothetical protein 182 29.53 0 234005..235030 - 341 18309164 - CPE0182 - ABC transporter ATP-binding protein 183 29.60 0 235341..236009 + 222 18309165 - CPE0183 - nitroreductase family protein 184 33.03 +1 236295..236960 + 221 18309166 nanP CPE0184 - N-acetylmannosamine-6-phosphate 2-epimerase 185 30.33 0 236997..237863 + 288 18309167 nanA CPE0185 - N-acetylneuraminate lyase 186 32.02 0 237966..239483 + 505 18309168 - CPE0186 - hypothetical protein 187 28.48 0 239593..240045 + 150 18309169 - CPE0187 - hypothetical protein 188 32.21 0 240201..241088 + 295 18309170 - CPE0188 - ROK family protein 189 28.10 0 241279..242118 + 279 18309171 - CPE0189 - RpiR family transcriptional regulator 190 26.67 0 242319..242708 - 129 18309172 - CPE0190 - hypothetical protein 191 31.18 0 242971..247857 + 1628 18309173 nagH CPE0191 - hyaluronidase 192 34.67 +1 248808..249479 + 223 161485644 cbiM CPE0192 - cobalt transport protein CbiM 193 31.73 0 249479..249790 + 103 18309175 cbiN CPE0193 - cobalt transport protein CbiN 194 25.28 -1 249837..250544 + 235 18309176 cbiQ CPE0194 - cobalt ABC transporter permease 195 29.84 0 250559..251416 + 285 18309177 cbiO CPE0195 - cobalt transporter ATP-binding subunit 196 33.46 +1 251886..253466 + 526 18309178 ptiB CPE0196 - PTS arbutin-like enzyme IIBC component 197 25.55 -1 253730..254500 + 256 18309179 - CPE0197 - hypothetical protein 198 24.55 -1 254724..255224 + 166 18309180 - CPE0198 - hypothetical protein 199 30.84 0 255480..256805 + 441 18309181 malH CPE0199 - maltose-6'-phosphate glucosidase 200 22.84 -1 257386..257547 + 53 18309182 - CPE0200 - hypothetical protein 201 29.98 0 257764..258627 - 287 18309183 - CPE0201 - 5'-nucleotidase, lipoprotein e(P4) family 202 30.33 0 258849..260048 - 399 18309184 spoIIQ CPE0202 - cell wall-binding protein 203 24.51 -1 260735..261391 + 218 18309185 - CPE0203 - hypothetical protein 204 23.49 -1 267399..268028 + 209 18309186 - CPE0204 - acetyltransferase 205 27.90 0 268495..268770 + 91 18309187 - CPE0205 - hypothetical protein 206 28.69 0 270353..270934 + 193 18309188 - CPE0206 - hypothetical protein 207 24.03 -1 271073..273448 - 791 18309189 - CPE0207 - two-component sensor histidine kinase 208 24.55 -1 273815..274873 + 352 18309190 - CPE0208 - hypothetical protein 209 27.19 0 274974..275201 + 75 18309191 - CPE0209 - hypothetical protein 210 20.98 -2 275341..276222 + 293 18309192 - CPE0210 - hypothetical protein 211 26.83 0 276250..278448 + 732 18309193 - CPE0211 - hypothetical protein 212 23.99 -1 278930..279700 + 256 18309194 - CPE0212 - hypothetical protein 213 30.15 0 279879..280694 - 271 18309195 - CPE0213 - hypothetical protein 214 26.67 0 281268..281912 - 214 18309196 - CPE0214 - heme oxygenase 215 31.05 0 282313..283536 + 407 18309197 sbcD CPE0215 - exonuclease 216 27.55 0 283514..287041 + 1175 18309198 sbcC CPE0216 - exonuclease SbcC 217 30.33 0 287446..288642 + 398 18309199 ackA CPE0217 - acetate kinase 218 25.30 -1 289079..289900 + 273 18309200 - CPE0218 - DnaJ-related protein 219 24.64 -1 290151..290909 - 252 18309201 - CPE0219 - AraC family transcriptional regulator 220 29.88 0 291056..293287 + 743 18309202 - CPE0220 - hypothetical protein 221 29.78 0 293350..293997 + 215 18309203 - CPE0221 - putative iron transporter 222 28.01 0 293999..294562 + 187 18309204 - CPE0222 - sortase family protein 223 30.86 0 294576..295463 + 295 18309205 - CPE0223 - ferrichrome ABC transporter 224 31.71 0 295450..296436 + 328 18309206 - CPE0224 - ferrichrome ABC transporter 225 27.44 0 296437..297216 + 259 18309207 fhuC CPE0225 - ferrichrome ABC transporter 226 28.71 0 297255..298985 + 576 18309208 - CPE0226 - ABC transporter 227 29.48 0 298986..300674 + 562 18309209 - CPE0227 - ABC transporter 228 25.76 0 300661..301056 + 131 18309210 - CPE0228 - hypothetical protein 229 26.33 0 301037..301336 + 99 18309211 - CPE0229 - hypothetical protein 230 29.03 0 301463..301648 + 61 18309212 - CPE0230 - iron-sulfur cluster-binding protein 231 31.74 0 301943..303388 + 481 18309213 - CPE0231 - arylsulfatase 232 33.11 +1 303546..304883 - 445 18309214 glpT CPE0232 - glycerol-3-phosphate transporter 233 30.10 0 305084..306103 - 339 18309215 - CPE0233 - iron(III) ABC transporter 234 24.33 -1 306084..306872 - 262 18309216 - CPE0234 - hypothetical protein 235 26.00 0 306865..308295 - 476 18309217 - CPE0235 - sensor histidine kinase 236 26.34 0 308285..308956 - 223 18309218 - CPE0236 - DNA-binding response regulator 237 29.42 0 309248..310447 + 399 18309219 napA CPE0237 - Na+/H+ antiporter 238 25.19 -1 310700..311227 + 175 18309220 - CPE0238 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.