version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1680 33.52 +1 1956198..1958306 - 702 18310662 pnpA CPE1680 - polynucleotide phosphorylase/polyadenylase 1681 32.20 0 1958398..1958661 - 87 18310663 rpsO CPE1681 - 30S ribosomal protein S15 1682 26.77 0 1958777..1959706 - 309 18310664 ribC CPE1682 - bifunctional riboflavin kinase/FMN adenylyltransferase 1683 28.93 0 1959710..1960594 - 294 18310665 truB CPE1683 - tRNA pseudouridine synthase B 1684 29.87 0 1960598..1961551 - 317 18310666 - CPE1684 - DHH subfamily 1 protein 1685 29.91 0 1961555..1961905 - 116 18310667 rbfA CPE1685 - ribosome-binding factor A 1686 34.12 +1 1961927..1963966 - 679 18310668 infB CPE1686 - translation initiation factor IF-2 1687 26.40 0 1963997..1964299 - 100 18310669 - CPE1687 - hypothetical protein 1688 29.96 0 1964292..1964558 - 88 18310670 - CPE1688 - hypothetical protein 1689 29.97 0 1964586..1965686 - 366 18310671 nusA CPE1689 - transcription elongation factor NusA 1690 28.17 0 1965706..1966170 - 154 18310672 - CPE1690 - hypothetical protein 1691 31.45 0 1966403..1970752 - 1449 18310673 polC CPE1691 - DNA polymerase III PolC 1692 31.71 0 1970830..1971879 - 349 18310674 ispG CPE1692 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1693 32.54 0 1971899..1972906 - 335 18310675 - CPE1693 - hypothetical protein 1694 29.18 0 1972918..1974072 - 384 18310676 - CPE1694 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1695 27.30 0 1974432..1975226 - 264 18310677 cdsA CPE1695 - phosphatidate cytidylyltransferase 1696 30.05 0 1975244..1976005 - 253 18310678 uppS CPE1696 - undecaprenyl diphosphate synthase 1697 28.32 0 1976070..1976627 - 185 18310679 frr CPE1697 - ribosome recycling factor 1698 34.73 +1 1976641..1977354 - 237 18310680 pyrH CPE1698 - uridylate kinase 1699 35.64 +1 1977447..1978358 - 303 18310681 tsf CPE1699 - elongation factor Ts 1700 33.76 +1 1978438..1979139 - 233 18310682 rpsB CPE1700 - 30S ribosomal protein S2 1701 29.34 0 1979521..1980297 - 258 18310683 - CPE1701 - transcriptional repressor CodY 1702 30.58 0 1980439..1982541 - 700 18310684 topA CPE1702 - DNA topoisomerase I 1703 27.61 0 1982586..1983668 - 360 18310685 smf CPE1703 - DNA protecting protein DprA 1704 29.92 0 1983669..1985192 - 507 18310686 comM CPE1704 - Mg chelatase-like protein 1705 24.93 -1 1985322..1985690 + 122 18310687 - CPE1705 - hypothetical protein 1706 27.23 0 1985691..1986509 - 272 18310688 rnhB CPE1706 - ribonuclease HII 1707 30.26 0 1986525..1987370 - 281 18310689 rbgA CPE1707 - ribosomal biogenesis GTPase 1708 33.05 +1 1987517..1987864 - 115 18310690 rplS CPE1708 - 50S ribosomal protein L19 1709 31.08 0 1987985..1988695 - 236 18310691 trmD CPE1709 - tRNA (guanine-N(1)-)-methyltransferase 1710 28.92 0 1988685..1989182 - 165 18310692 rimM CPE1710 - 16S rRNA-processing protein 1711 32.46 0 1989238..1989465 - 75 18310693 - CPE1711 - hypothetical protein 1712 38.21 +2 1989509..1989754 - 81 18310694 rpsP CPE1712 - 30S ribosomal protein S16 1713 32.52 0 1989788..1991146 - 452 18310695 ffh CPE1713 - signal recognition particle protein 1714 25.96 0 1991158..1991496 - 112 18310696 - CPE1714 - hypothetical protein 1715 31.04 0 1991673..1992587 - 304 18310697 ftsY CPE1715 - signal recognition particle-docking protein FtsY 1716 26.81 0 1992601..1996158 - 1185 18310698 smc CPE1716 - chromosome segregation protein SMC 1717 29.24 0 1996363..1997436 - 357 18310699 - CPE1717 - radical SAM domain protein 1718 27.45 0 1997415..1998128 - 237 18310700 rnc CPE1718 - ribonuclease III 1719 32.47 0 1998227..1998457 - 76 18310701 acpA CPE1719 - acyl carrier protein 1720 31.60 0 1998534..1999166 - 210 18310702 plsX CPE1720 - putative glycerol-3-phosphate acyltransferase PlsX 1721 33.61 +1 1999139..1999504 - 121 18310703 plsX CPE1721 - fatty acid/phospholipid synthesis protein 1722 37.70 +2 1999613..1999795 - 60 18310704 rpmF CPE1722 - 50S ribosomal protein L32 1723 32.07 0 1999811..2000206 - 131 18310705 - CPE1723 - hypothetical protein 1724 31.91 0 2000425..2001621 - 398 18310706 ackB CPE1724 - acetate kinase 1725 35.22 +1 2001712..2002719 - 335 18310707 eutD CPE1725 - phosphotransacetylase 1726 26.98 0 2003056..2004156 + 366 18310708 - CPE1726 - hypothetical protein 1727 26.01 0 2004221..2005381 + 386 18310709 - CPE1727 - hypothetical protein 1728 30.32 0 2005364..2005894 - 176 18310710 - CPE1728 - hypothetical protein 1729 31.11 0 2005903..2006397 - 164 18310711 coaD CPE1729 - pantetheine-phosphate adenylyltransferase 1730 31.00 0 2006399..2006956 - 185 18310712 - CPE1730 - hypothetical protein 1731 28.32 0 2007021..2009093 - 690 18310713 recG CPE1731 - ATP-dependent DNA helicase RecG 1732 33.27 +1 2009246..2010892 - 548 18310714 - CPE1732 - DAK2 domain protein 1733 30.17 0 2010906..2011253 - 115 18310715 - CPE1733 - hypothetical protein 1734 34.12 +1 2011513..2011767 + 84 18310716 rpmB CPE1734 - 50S ribosomal protein L28 1735 28.10 0 2011946..2012575 - 209 18310717 - CPE1735 - thiamine pyrophosphokinase 1736 31.50 0 2012577..2013230 - 217 18310718 - CPE1736 - ribulose-phosphate 3-epimerase 1737 29.40 0 2013230..2014093 - 287 18310719 - CPE1737 - ribosome-associated GTPase 1738 32.51 0 2014330..2016387 - 685 18310720 - CPE1738 - pobable serine/threonine protein kinase 1739 30.28 0 2016389..2017108 - 239 18310721 - CPE1739 - protein phosphatase 2C family protein 1740 30.08 0 2017121..2018164 - 347 18310722 - CPE1740 - radical SAM enzyme, Cfr family 1741 27.69 0 2018196..2019524 - 442 18310723 - CPE1741 - RNA-binding Sun protein 1742 31.47 0 2019535..2020230 - 231 18310724 - CPE1742 - hypothetical protein 1743 31.18 0 2020248..2021177 - 309 18310725 fmt CPE1743 - methionyl-tRNA formyltransferase 1744 31.08 0 2021197..2021640 - 147 18310726 def CPE1744 - polypeptide deformylase 1745 27.64 0 2021654..2023849 - 731 18310727 - CPE1745 - primosome assembly protein PriA 1746 32.74 +1 2023888..2025075 - 395 18310728 - CPE1746 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1747 29.11 0 2025081..2025293 - 70 18310729 rpoZ CPE1747 - DNA-directed RNA polymerase subunit omega 1748 29.85 0 2025274..2025933 - 219 18310730 gmk CPE1748 - guanylate kinase 1749 33.33 +1 2025914..2026183 - 89 18310731 - CPE1749 - hypothetical protein 1750 28.81 0 2026197..2027081 - 294 18310732 - CPE1750 - hypothetical protein 1751 31.40 0 2027301..2028698 - 465 18310733 - CPE1751 - hypothetical protein 1752 32.52 0 2028956..2029939 - 327 18310734 ansA CPE1752 - L-asparaginase 1753 31.03 0 2030290..2031765 - 491 18310735 spoIVA CPE1753 - stage IV sporulation protein A 1754 33.13 +1 2032094..2033089 - 331 18310736 gpsA CPE1754 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1755 30.98 0 2033094..2034410 - 438 18310737 engA CPE1755 - GTP-binding protein EngA 1756 30.57 0 2034413..2035750 - 445 18310738 - CPE1756 - hypothetical protein 1757 27.21 0 2036077..2037792 - 571 18310739 - CPE1757 - sensory box histidine kinase 1758 28.51 0 2037806..2038510 - 234 18310740 - CPE1758 - hypothetical protein 1759 28.89 0 2038676..2039125 - 149 18310741 - CPE1759 - transcriptional regulator NrdR 1760 27.11 0 2039187..2039459 - 90 18310742 - CPE1760 - hypothetical protein 1761 30.14 0 2039600..2040412 - 270 18310743 sigG CPE1761 - sporulation sigma factor SigG 1762 28.53 0 2040448..2041155 - 235 18310744 sigE CPE1762 - sporulation sigma factor SigE 1763 25.53 -1 2041169..2041975 - 268 18310745 spoIIGA CPE1763 - sporulation factor SpoIIGA 1764 15.90 -2 2042013..2042207 - 64 18310746 - CPE1764 - hypothetical protein 1765 34.12 +1 2042380..2043525 - 381 18310747 ftsZ CPE1765 - cell division protein FtsZ 1766 26.80 0 2043539..2044777 - 412 18310748 ftsA CPE1766 - cell division protein FtsA 1767 31.34 0 2044855..2045907 - 350 18310749 pilT CPE1767 - twitching motility protein PilT 1768 29.49 0 2046088..2046789 - 233 18310750 sigK CPE1768 - sporulation sigma factor SigK 1769 28.90 0 2046852..2048519 - 555 18310751 spoVD CPE1769 - stage V sporulation protein D 1770 29.82 0 2048632..2049258 - 208 18310752 - CPE1770 - uridine kinase 1771 32.03 0 2049258..2050487 - 409 18310753 - CPE1771 - peptidase, U32 family 1772 29.61 0 2050493..2051137 - 214 18310754 - CPE1772 - O-methyltransferase family protein 1773 30.42 0 2051153..2052181 - 342 18310755 - CPE1773 - hypothetical protein 1774 32.19 0 2052324..2054156 - 610 18310756 typA CPE1774 - GTP-binding protein TypA 1775 32.93 +1 2054313..2056058 - 581 18310757 - CPE1775 - hypothetical protein 1776 32.45 0 2056051..2056503 - 150 18310758 - CPE1776 - FUR family transcriptional regulator 1777 31.76 0 2056524..2056778 - 84 18310759 - CPE1777 - hypothetical protein 1778 33.57 +1 2056794..2057207 - 137 18310760 - CPE1778 - Holliday junction resolvase-like protein 1779 31.01 0 2057255..2057512 - 85 18310761 - CPE1779 - hypothetical protein 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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