version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1636 32.40 0 1908420..1909064 - 214 18310618 ntpD CPE1636 - V-type ATP synthase subunit D 1637 35.79 +1 1909067..1910449 - 460 18310619 ntpB CPE1637 - V-type ATP synthase subunit B 1638 37.73 +2 1910442..1912217 - 591 18310620 ntpA CPE1638 - V-type ATP synthase subunit A 1639 32.70 +1 1912234..1912551 - 105 18310621 ntpF CPE1639 - V-type ATP synthase subunit F 1640 27.88 0 1912538..1913545 - 335 18310622 ntpC CPE1640 - V-type ATP synthase subunit C 1641 26.13 0 1913558..1914154 - 198 18310623 ntpE CPE1641 - V-type ATPase, E subunit 1642 35.35 +1 1914185..1914679 - 164 18310624 ntpK CPE1642 - V-type ATP synthase subunit K 1643 32.20 0 1914734..1916680 - 648 18310625 ntpI CPE1643 - V-type ATP synthase subunit I 1644 32.72 +1 1916667..1916993 - 108 18310626 - CPE1644 - hypothetical protein 1645 28.04 0 1917270..1918949 - 559 18310627 - CPE1645 - radical SAM domain protein 1646 26.53 0 1918849..1919451 - 200 18310628 - CPE1646 - hypothetical protein 1647 25.80 0 1919598..1920884 - 428 18310629 - CPE1647 - hypothetical protein 1648 27.25 0 1921032..1922561 + 509 18310630 spoVB CPE1648 - stage V sporulation protein B 1649 26.34 0 1922655..1923455 - 266 18310631 - CPE1649 - hypothetical protein 1650 28.35 0 1923565..1924407 - 280 18310632 - CPE1650 - hypothetical protein 1651 32.34 0 1924419..1924922 - 167 18310633 - CPE1651 - hypothetical protein 1652 26.75 0 1925171..1926172 + 333 18310634 - CPE1652 - hypothetical protein 1653 27.07 0 1926200..1926550 - 116 18310635 - CPE1653 - hypothetical protein 1654 28.66 0 1926770..1927240 + 156 18310636 - CPE1654 - AsnC family transcriptional regulator 1655 27.94 0 1927347..1927550 + 67 18310637 - CPE1655 - hypothetical protein 1656 29.61 0 1927598..1929343 - 581 18310638 - CPE1656 - hypothetical protein 1657 28.65 0 1929544..1930398 + 284 18310639 comEC CPE1657 - late competence protein 1658 26.17 0 1930455..1931138 - 227 18310640 - CPE1658 - hypothetical protein 1659 30.59 0 1931324..1931542 + 72 18310641 feoA CPE1659 - ferrous iron transport protein A 1660 30.95 0 1931580..1933343 + 587 18310642 feoB CPE1660 - ferrous iron transport protein B 1661 30.80 0 1933553..1935250 - 565 18310643 argS CPE1661 - arginyl-tRNA synthetase 1662 27.97 0 1935732..1937240 + 502 18310644 - CPE1662 - Ppx/GppA phosphatase family protein 1663 29.71 0 1937338..1938552 - 404 18310645 - CPE1663 - hypothetical protein 1664 28.02 0 1938718..1939338 - 206 18310646 - CPE1664 - peptidase, M50 family 1665 30.43 0 1939543..1940922 - 459 18310647 - CPE1665 - PhoH family protein 1666 27.64 0 1941144..1941758 + 204 18310648 - CPE1666 - hypothetical protein 1667 26.97 0 1941795..1942124 - 109 18310649 - CPE1667 - single-strand binding protein 1668 30.82 0 1942405..1943835 - 476 18310650 purB CPE1668 - adenylosuccinate lyase 1669 31.80 0 1944078..1944338 - 86 18310651 hpr CPE1669 - phosphocarrier protein 1670 30.07 0 1944433..1945626 - 397 18310652 aspC CPE1670 - aspartate aminotransferase 1671 36.78 +2 1945779..1946039 - 86 18310653 spoVS CPE1671 - stage V sporulation protein S 1672 34.34 +1 1946257..1947849 - 530 18310654 - CPE1672 - phosphodiesterase 1673 34.56 +1 1948140..1949198 - 352 18310655 recA CPE1673 - recombinase A 1674 29.95 0 1949334..1949924 - 196 18310656 - CPE1674 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1675 29.30 0 1949908..1951245 - 445 18310657 - CPE1675 - hypothetical protein 1676 31.03 0 1951314..1953704 - 796 18310658 spoIIIE CPE1676 - DNA translocase FtsK 1677 30.78 0 1953836..1954579 - 247 18310659 - CPE1677 - Clp protease 1678 30.91 0 1954579..1955775 - 398 18310660 dapG CPE1678 - aspartate kinase I 1679 26.09 0 1955789..1956064 - 91 18310661 - CPE1679 - PRC-barrel domain protein 1680 33.52 +1 1956198..1958306 - 702 18310662 pnpA CPE1680 - polynucleotide phosphorylase/polyadenylase 1681 32.20 0 1958398..1958661 - 87 18310663 rpsO CPE1681 - 30S ribosomal protein S15 1682 26.77 0 1958777..1959706 - 309 18310664 ribC CPE1682 - bifunctional riboflavin kinase/FMN adenylyltransferase 1683 28.93 0 1959710..1960594 - 294 18310665 truB CPE1683 - tRNA pseudouridine synthase B 1684 29.87 0 1960598..1961551 - 317 18310666 - CPE1684 - DHH subfamily 1 protein 1685 29.91 0 1961555..1961905 - 116 18310667 rbfA CPE1685 - ribosome-binding factor A 1686 34.12 +1 1961927..1963966 - 679 18310668 infB CPE1686 - translation initiation factor IF-2 1687 26.40 0 1963997..1964299 - 100 18310669 - CPE1687 - hypothetical protein 1688 29.96 0 1964292..1964558 - 88 18310670 - CPE1688 - hypothetical protein 1689 29.97 0 1964586..1965686 - 366 18310671 nusA CPE1689 - transcription elongation factor NusA 1690 28.17 0 1965706..1966170 - 154 18310672 - CPE1690 - hypothetical protein 1691 31.45 0 1966403..1970752 - 1449 18310673 polC CPE1691 - DNA polymerase III PolC 1692 31.71 0 1970830..1971879 - 349 18310674 ispG CPE1692 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1693 32.54 0 1971899..1972906 - 335 18310675 - CPE1693 - hypothetical protein 1694 29.18 0 1972918..1974072 - 384 18310676 - CPE1694 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1695 27.30 0 1974432..1975226 - 264 18310677 cdsA CPE1695 - phosphatidate cytidylyltransferase 1696 30.05 0 1975244..1976005 - 253 18310678 uppS CPE1696 - undecaprenyl diphosphate synthase 1697 28.32 0 1976070..1976627 - 185 18310679 frr CPE1697 - ribosome recycling factor 1698 34.73 +1 1976641..1977354 - 237 18310680 pyrH CPE1698 - uridylate kinase 1699 35.64 +1 1977447..1978358 - 303 18310681 tsf CPE1699 - elongation factor Ts 1700 33.76 +1 1978438..1979139 - 233 18310682 rpsB CPE1700 - 30S ribosomal protein S2 1701 29.34 0 1979521..1980297 - 258 18310683 - CPE1701 - transcriptional repressor CodY 1702 30.58 0 1980439..1982541 - 700 18310684 topA CPE1702 - DNA topoisomerase I 1703 27.61 0 1982586..1983668 - 360 18310685 smf CPE1703 - DNA protecting protein DprA 1704 29.92 0 1983669..1985192 - 507 18310686 comM CPE1704 - Mg chelatase-like protein 1705 24.93 -1 1985322..1985690 + 122 18310687 - CPE1705 - hypothetical protein 1706 27.23 0 1985691..1986509 - 272 18310688 rnhB CPE1706 - ribonuclease HII 1707 30.26 0 1986525..1987370 - 281 18310689 rbgA CPE1707 - ribosomal biogenesis GTPase 1708 33.05 +1 1987517..1987864 - 115 18310690 rplS CPE1708 - 50S ribosomal protein L19 1709 31.08 0 1987985..1988695 - 236 18310691 trmD CPE1709 - tRNA (guanine-N(1)-)-methyltransferase 1710 28.92 0 1988685..1989182 - 165 18310692 rimM CPE1710 - 16S rRNA-processing protein 1711 32.46 0 1989238..1989465 - 75 18310693 - CPE1711 - hypothetical protein 1712 38.21 +2 1989509..1989754 - 81 18310694 rpsP CPE1712 - 30S ribosomal protein S16 1713 32.52 0 1989788..1991146 - 452 18310695 ffh CPE1713 - signal recognition particle protein 1714 25.96 0 1991158..1991496 - 112 18310696 - CPE1714 - hypothetical protein 1715 31.04 0 1991673..1992587 - 304 18310697 ftsY CPE1715 - signal recognition particle-docking protein FtsY 1716 26.81 0 1992601..1996158 - 1185 18310698 smc CPE1716 - chromosome segregation protein SMC 1717 29.24 0 1996363..1997436 - 357 18310699 - CPE1717 - radical SAM domain protein 1718 27.45 0 1997415..1998128 - 237 18310700 rnc CPE1718 - ribonuclease III 1719 32.47 0 1998227..1998457 - 76 18310701 acpA CPE1719 - acyl carrier protein 1720 31.60 0 1998534..1999166 - 210 18310702 plsX CPE1720 - putative glycerol-3-phosphate acyltransferase PlsX 1721 33.61 +1 1999139..1999504 - 121 18310703 plsX CPE1721 - fatty acid/phospholipid synthesis protein 1722 37.70 +2 1999613..1999795 - 60 18310704 rpmF CPE1722 - 50S ribosomal protein L32 1723 32.07 0 1999811..2000206 - 131 18310705 - CPE1723 - hypothetical protein 1724 31.91 0 2000425..2001621 - 398 18310706 ackB CPE1724 - acetate kinase 1725 35.22 +1 2001712..2002719 - 335 18310707 eutD CPE1725 - phosphotransacetylase 1726 26.98 0 2003056..2004156 + 366 18310708 - CPE1726 - hypothetical protein 1727 26.01 0 2004221..2005381 + 386 18310709 - CPE1727 - hypothetical protein 1728 30.32 0 2005364..2005894 - 176 18310710 - CPE1728 - hypothetical protein 1729 31.11 0 2005903..2006397 - 164 18310711 coaD CPE1729 - pantetheine-phosphate adenylyltransferase 1730 31.00 0 2006399..2006956 - 185 18310712 - CPE1730 - hypothetical protein 1731 28.32 0 2007021..2009093 - 690 18310713 recG CPE1731 - ATP-dependent DNA helicase RecG 1732 33.27 +1 2009246..2010892 - 548 18310714 - CPE1732 - DAK2 domain protein 1733 30.17 0 2010906..2011253 - 115 18310715 - CPE1733 - hypothetical protein 1734 34.12 +1 2011513..2011767 + 84 18310716 rpmB CPE1734 - 50S ribosomal protein L28 1735 28.10 0 2011946..2012575 - 209 18310717 - CPE1735 - thiamine pyrophosphokinase 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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