version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1536 32.38 0 1799318..1800364 - 348 18310518 asrC CPE1536 - anaerobic sulfite reductase subunit C 1537 30.68 0 1800377..1801168 - 263 18310519 asrB CPE1537 - anaerobic sulfite reductase subunit B 1538 28.49 0 1801169..1802200 - 343 18310520 asrA CPE1538 - anaerobic sulfite reductase subunit A 1539 23.84 -1 1802460..1802870 + 136 18310521 - CPE1539 - hypothetical protein 1540 30.04 0 1802968..1804152 - 394 18310522 - CPE1540 - ABC transporter 1541 29.34 0 1804139..1804840 - 233 18310523 - CPE1541 - ABC transporter 1542 31.21 0 1804830..1805960 - 376 18310524 - CPE1542 - hypothetical protein 1543 27.37 0 1806187..1806873 - 228 18310525 bioD CPE1543 - dithiobiotin synthetase 1544 29.06 0 1806876..1807835 - 319 18310526 bioB CPE1544 - biotin synthase 1545 29.73 0 1807854..1808408 - 184 18310527 bioY CPE1545 - biotin synthase 1546 30.40 0 1808794..1809885 - 363 18310528 - CPE1546 - hypothetical protein 1547 27.46 0 1810241..1813678 - 1145 18310529 spoVK CPE1547 - stage V sporulation protein K 1548 29.31 0 1813734..1815722 - 662 18310530 fdh CPE1548 - molybdopterin oxidoreductase 1549 31.32 0 1816133..1817227 + 364 18310531 prs CPE1549 - phosphoribosylpyrophosphate synthetase 1550 29.57 0 1817277..1818338 - 353 18310532 - CPE1550 - hypothetical protein 1551 29.19 0 1818549..1819538 - 329 18310533 - CPE1551 - endo-1,4-beta-xylanase 1552 29.07 0 1819759..1821726 - 655 18310534 pulA CPE1552 - pullulanase 1553 23.46 -1 1821902..1822438 + 178 18310535 sipS CPE1553 - signal peptidase I 1554 26.24 0 1822494..1823339 - 281 18310536 - CPE1554 - putative lipoprotein 1555 22.59 -1 1823448..1823717 - 89 18310537 - CPE1555 - hypothetical protein 1556 27.53 0 1823828..1825843 - 671 18310538 - CPE1556 - hypothetical protein 1557 26.92 0 1826145..1827095 - 316 18310539 - CPE1557 - hypothetical protein 1558 31.93 0 1827243..1827884 + 213 18310540 - CPE1558 - di-trans, poly-cis-decaprenylcistransferase 1559 25.87 0 1827889..1829388 + 499 18310541 - CPE1559 - diapophytoene dehydrogenase 1560 26.06 0 1829419..1831110 - 563 18310542 - CPE1560 - GGDEF/HD domain protein 1561 24.03 -1 1831325..1831969 - 214 18310543 - CPE1561 - hypothetical protein 1562 21.96 -2 1831971..1832480 - 169 18310544 - CPE1562 - hypothetical protein 1563 26.28 0 1832449..1833015 - 188 18310545 - CPE1563 - hypothetical protein 1564 25.31 -1 1833167..1833727 - 186 18310546 - CPE1564 - hypothetical protein 1565 29.42 0 1833988..1834983 - 331 18310547 - CPE1565 - hypothetical protein 1566 30.09 0 1835113..1836192 - 359 18310548 dinP CPE1566 - DNA polymerase IV 1567 34.76 +1 1836335..1836967 - 210 18310549 ppiB CPE1567 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 1568 27.16 0 1837145..1837549 - 134 18310550 - CPE1568 - hypothetical protein 1569 31.89 0 1837666..1838496 - 276 18310551 - CPE1569 - HAD hydrolase, IIB family 1570 27.59 0 1838800..1839513 - 237 18310552 - CPE1570 - phage shock protein A 1571 28.92 0 1839598..1840299 - 233 18310553 - CPE1571 - putative lipoprotein 1572 23.42 -1 1840447..1841112 + 221 18310554 - CPE1572 - hypothetical protein 1573 27.98 0 1841356..1843692 - 778 18310555 - CPE1573 - bifunctional glutamate--cysteine ligase/glutathione synthetase 1574 31.37 0 1844089..1845006 - 305 18310556 - CPE1574 - hypothetical protein 1575 30.93 0 1845153..1846442 - 429 18310557 - CPE1575 - hypothetical protein 1576 28.73 0 1846695..1847063 - 122 18310558 - CPE1576 - hypothetical protein 1577 34.59 +1 1847265..1848218 - 317 18310559 - CPE1577 - ABC transporter 1578 32.79 +1 1848218..1849315 - 365 18310560 - CPE1578 - ABC transporter 1579 30.66 0 1849305..1850840 - 511 18310561 - CPE1579 - ABC transporter 1580 35.67 +1 1850981..1852093 - 370 18310562 - CPE1580 - membrane lipoprotein TmpC precursor 1581 27.13 0 1852647..1853468 - 273 18310563 - CPE1581 - lipase 1582 25.55 -1 1853950..1854771 - 273 18310564 - CPE1582 - hypothetical protein 1583 28.94 0 1854780..1856486 - 568 18310565 - CPE1583 - ABC transporter 1584 29.57 0 1856632..1857189 - 185 18310566 - CPE1584 - hypothetical protein 1585 30.46 0 1857409..1857861 + 150 18310567 - CPE1585 - rhodanese domain protein 1586 21.60 -2 1857907..1858230 - 107 18310568 - CPE1586 - hypothetical protein 1587 28.76 0 1858372..1861566 - 1064 18310569 pulB CPE1587 - pullulanase 1588 31.13 0 1861666..1863660 - 664 18310570 glgB CPE1588 - glycogen branching enzyme 1589 25.71 0 1863740..1864447 - 235 18310571 - CPE1589 - hypothetical protein 1590 28.79 0 1864689..1865459 + 256 18310572 - CPE1590 - hypothetical protein 1591 28.05 0 1865456..1865947 + 163 18310573 - CPE1591 - hypothetical protein 1592 26.82 0 1866140..1866907 - 255 18310574 - CPE1592 - hypothetical protein 1593 28.43 0 1867256..1868683 - 475 18310575 - CPE1593 - hypothetical protein 1594 19.25 -2 1868755..1868967 - 70 18310576 - CPE1594 - hypothetical protein 1595 25.31 -1 1869140..1869463 - 107 18310577 - CPE1595 - putative thioredoxin 1596 31.25 0 1869559..1870518 - 319 18310578 - CPE1596 - acetylxylan esterase 1597 29.05 0 1870960..1871823 + 287 18310579 - CPE1597 - hypothetical protein 1598 26.81 0 1871906..1872334 - 142 18310580 - CPE1598 - hypothetical protein 1599 28.69 0 1872446..1873027 - 193 18310581 thiE CPE1599 - thiamine monophosphate synthase family protein 1600 31.16 0 1873057..1874160 - 367 18310582 thiH CPE1600 - thiamine biosynthesis protein ThiH 1601 35.69 +1 1874173..1874937 - 254 18310583 thiG CPE1601 - thiazole synthase 1602 28.89 0 1875061..1875870 - 269 18310584 - CPE1602 - thiamine biosynthesis protein ThiF 1603 26.67 0 1875946..1876140 - 64 18310585 - CPE1603 - thiamine biosynthesis protein ThiS 1604 30.51 0 1876416..1878116 - 566 18310586 - CPE1604 - transporter, major facilitator family 1605 25.31 -1 1878452..1879261 - 269 18310587 - CPE1605 - GTP pyrophosphokinase-like protein 1606 26.67 0 1879313..1879612 - 99 18310588 - CPE1606 - hypothetical protein 1607 30.63 0 1879670..1880113 - 147 18310589 - CPE1607 - methionine sulfoxide reductase B 1608 24.69 -1 1880189..1880836 - 215 18310590 - CPE1608 - hypothetical protein 1609 21.33 -2 1880986..1881285 + 99 18310591 - CPE1609 - hypothetical protein 1610 28.25 0 1881329..1882312 - 327 18310592 - CPE1610 - endo-1,4-beta-xylanase 1611 21.85 -2 1882553..1882822 - 89 18310593 - CPE1611 - hypothetical protein 1612 26.45 0 1882925..1883578 + 217 18310594 - CPE1612 - hypothetical protein 1613 23.50 -1 1883647..1884012 - 121 18310595 - CPE1613 - hypothetical protein 1614 29.26 0 1884141..1885466 - 441 18310596 - CPE1614 - cell wall-binding protein 1615 21.92 -2 1885709..1885927 - 72 18310597 - CPE1615 - hypothetical protein 1616 28.57 0 1886074..1886262 + 62 18310598 - CPE1616 - hypothetical protein 1617 30.05 0 1886615..1887010 - 131 18310599 - CPE1617 - hypothetical protein 1618 27.13 0 1887026..1887283 - 85 18310600 - CPE1618 - hypothetical protein 1619 27.62 0 1887300..1889591 - 763 18310601 - CPE1619 - ATP-dependent DNA helicase, UvrD/REP family 1620 29.30 0 1890116..1890586 + 156 18310602 - CPE1620 - hypothetical protein 1621 26.15 0 1890669..1891475 - 268 18310603 - CPE1621 - hypothetical protein 1622 25.30 -1 1891744..1892739 - 331 18310604 - CPE1622 - hypothetical protein 1623 24.62 -1 1892881..1893546 + 221 18310605 - CPE1623 - putative lipoprotein 1624 24.77 -1 1893868..1895793 + 641 18310606 - CPE1624 - hypothetical protein 1625 27.50 0 1896218..1899472 - 1084 18310607 - CPE1625 - helicase, SNF2/RAD54 family 1626 28.47 0 1899839..1900825 - 328 18310608 - CPE1626 - transcriptional regulator 1627 31.97 0 1900964..1901404 - 146 18310609 rbsB CPE1627 - ribose ABC transporter 1628 32.78 +1 1901337..1901876 - 179 18310610 - CPE1628 - ribose ABC transporter 1629 31.09 0 1901898..1902833 - 311 18310611 rbsC CPE1629 - ribose ABC transporter 1630 30.35 0 1902847..1904352 - 501 18310612 rbsA CPE1630 - ribose ABC transporter 1631 29.04 0 1904439..1904834 - 131 18310613 rbsD CPE1631 - D-ribose pyranase 1632 29.47 0 1904837..1905769 - 310 18310614 rbsK CPE1632 - ribokinase 1633 30.56 0 1905910..1906377 - 155 18310615 def CPE1633 - polypeptide deformylase 1634 30.73 0 1906533..1907492 - 319 18310616 tagO CPE1634 - undecaprenyl-phosphate N-acetylglucosaminyltransferase 1635 27.87 0 1907638..1908204 - 188 18310617 - CPE1635 - transcriptional regulator 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.