version 1.0
Clostridium perfringens str. 13, complete genome - 1..3031430 2660 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1503 31.25 0 1755260..1755547 - 95 18310485 - CPE1503 - hypothetical protein 1504 32.45 0 1755771..1756784 - 337 18310486 - CPE1504 - hypothetical protein 1505 31.79 0 1757210..1758508 - 432 18310487 uraA CPE1505 - uracil transporter 1506 32.26 0 1758696..1760279 + 527 18310488 - CPE1506 - ABC transporter 1507 29.39 0 1760330..1761292 - 320 18310489 - CPE1507 - endo-1,4-beta-xylanase 1508 30.18 0 1761676..1763862 - 728 18310490 topB CPE1508 - DNA topoisomerase III 1509 24.95 -1 1763959..1765377 - 472 18310491 - CPE1509 - hypothetical protein 1510 21.37 -2 1765387..1765854 - 155 18310492 - CPE1510 - hypothetical protein 1511 22.56 -1 1766269..1766667 - 132 18310493 - CPE1511 - hypothetical protein 1512 28.43 0 1766875..1770156 - 1093 18310494 - CPE1512 - sensor histidine kinase/response regulator 1513 24.07 -1 1770238..1771338 - 366 18310495 - CPE1513 - hypothetical protein 1514 25.00 -1 1771353..1772720 - 455 18310496 argI CPE1514 - AlgI-related protein 1515 31.93 0 1772948..1773445 - 165 18310497 - CPE1515 - putative lipoprotein 1516 28.02 0 1773697..1774920 - 407 18310498 - CPE1516 - ATP-dependent RNA helicase, DEAD/DEAH box family 1517 24.04 -1 1774938..1775249 - 103 18310499 - CPE1517 - hypothetical protein 1518 32.74 +1 1775558..1776904 - 448 18310500 gdhA CPE1518 - glutamate dehydrogenase 1519 26.87 0 1777386..1777880 - 164 18310501 - CPE1519 - hypothetical protein 1520 33.82 +1 1778114..1779139 + 341 18310502 ilvE CPE1520 - branched-chain amino acid aminotransferase 1521 21.01 -2 1779183..1779596 - 137 18310503 - CPE1521 - hypothetical protein 1522 23.63 -1 1779619..1780164 - 181 18310504 - CPE1522 - hypothetical protein 1523 30.76 0 1780361..1783744 - 1127 18310505 nagL CPE1523 - hyaluronidase 1524 26.86 0 1784103..1785029 + 308 18310506 - CPE1524 - hypothetical protein 1525 29.32 0 1785150..1786919 - 589 18310507 - CPE1525 - ABC transporter 1526 28.34 0 1786954..1788675 - 573 18310508 - CPE1526 - ABC transporter 1527 25.16 -1 1789308..1790102 - 264 18310509 - CPE1527 - hypothetical protein 1528 22.78 -1 1790285..1790644 - 119 18310510 - CPE1528 - hypothetical protein 1529 27.20 0 1790912..1792249 + 445 18310511 - CPE1529 - hypothetical protein 1530 19.42 -2 1792316..1792732 - 138 18310512 - CPE1530 - hypothetical protein 1531 30.38 0 1792953..1793900 - 315 18310513 - CPE1531 - fructokinase 1532 27.87 0 1793893..1795356 - 487 18310514 sacA CPE1532 - sucrose-6-P hydrolase 1533 27.73 0 1795396..1796376 - 326 18310515 - CPE1533 - sucrose operon repressor 1534 31.71 0 1796505..1797857 - 450 18310516 - CPE1534 - PTS system, sucrose-specific IIBC component 1535 25.84 0 1798180..1798806 - 208 18310517 - CPE1535 - hypothetical protein 1536 32.38 0 1799318..1800364 - 348 18310518 asrC CPE1536 - anaerobic sulfite reductase subunit C 1537 30.68 0 1800377..1801168 - 263 18310519 asrB CPE1537 - anaerobic sulfite reductase subunit B 1538 28.49 0 1801169..1802200 - 343 18310520 asrA CPE1538 - anaerobic sulfite reductase subunit A 1539 23.84 -1 1802460..1802870 + 136 18310521 - CPE1539 - hypothetical protein 1540 30.04 0 1802968..1804152 - 394 18310522 - CPE1540 - ABC transporter 1541 29.34 0 1804139..1804840 - 233 18310523 - CPE1541 - ABC transporter 1542 31.21 0 1804830..1805960 - 376 18310524 - CPE1542 - hypothetical protein 1543 27.37 0 1806187..1806873 - 228 18310525 bioD CPE1543 - dithiobiotin synthetase 1544 29.06 0 1806876..1807835 - 319 18310526 bioB CPE1544 - biotin synthase 1545 29.73 0 1807854..1808408 - 184 18310527 bioY CPE1545 - biotin synthase 1546 30.40 0 1808794..1809885 - 363 18310528 - CPE1546 - hypothetical protein 1547 27.46 0 1810241..1813678 - 1145 18310529 spoVK CPE1547 - stage V sporulation protein K 1548 29.31 0 1813734..1815722 - 662 18310530 fdh CPE1548 - molybdopterin oxidoreductase 1549 31.32 0 1816133..1817227 + 364 18310531 prs CPE1549 - phosphoribosylpyrophosphate synthetase 1550 29.57 0 1817277..1818338 - 353 18310532 - CPE1550 - hypothetical protein 1551 29.19 0 1818549..1819538 - 329 18310533 - CPE1551 - endo-1,4-beta-xylanase 1552 29.07 0 1819759..1821726 - 655 18310534 pulA CPE1552 - pullulanase 1553 23.46 -1 1821902..1822438 + 178 18310535 sipS CPE1553 - signal peptidase I 1554 26.24 0 1822494..1823339 - 281 18310536 - CPE1554 - putative lipoprotein 1555 22.59 -1 1823448..1823717 - 89 18310537 - CPE1555 - hypothetical protein 1556 27.53 0 1823828..1825843 - 671 18310538 - CPE1556 - hypothetical protein 1557 26.92 0 1826145..1827095 - 316 18310539 - CPE1557 - hypothetical protein 1558 31.93 0 1827243..1827884 + 213 18310540 - CPE1558 - di-trans, poly-cis-decaprenylcistransferase 1559 25.87 0 1827889..1829388 + 499 18310541 - CPE1559 - diapophytoene dehydrogenase 1560 26.06 0 1829419..1831110 - 563 18310542 - CPE1560 - GGDEF/HD domain protein 1561 24.03 -1 1831325..1831969 - 214 18310543 - CPE1561 - hypothetical protein 1562 21.96 -2 1831971..1832480 - 169 18310544 - CPE1562 - hypothetical protein 1563 26.28 0 1832449..1833015 - 188 18310545 - CPE1563 - hypothetical protein 1564 25.31 -1 1833167..1833727 - 186 18310546 - CPE1564 - hypothetical protein 1565 29.42 0 1833988..1834983 - 331 18310547 - CPE1565 - hypothetical protein 1566 30.09 0 1835113..1836192 - 359 18310548 dinP CPE1566 - DNA polymerase IV 1567 34.76 +1 1836335..1836967 - 210 18310549 ppiB CPE1567 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 1568 27.16 0 1837145..1837549 - 134 18310550 - CPE1568 - hypothetical protein 1569 31.89 0 1837666..1838496 - 276 18310551 - CPE1569 - HAD hydrolase, IIB family 1570 27.59 0 1838800..1839513 - 237 18310552 - CPE1570 - phage shock protein A 1571 28.92 0 1839598..1840299 - 233 18310553 - CPE1571 - putative lipoprotein 1572 23.42 -1 1840447..1841112 + 221 18310554 - CPE1572 - hypothetical protein 1573 27.98 0 1841356..1843692 - 778 18310555 - CPE1573 - bifunctional glutamate--cysteine ligase/glutathione synthetase 1574 31.37 0 1844089..1845006 - 305 18310556 - CPE1574 - hypothetical protein 1575 30.93 0 1845153..1846442 - 429 18310557 - CPE1575 - hypothetical protein 1576 28.73 0 1846695..1847063 - 122 18310558 - CPE1576 - hypothetical protein 1577 34.59 +1 1847265..1848218 - 317 18310559 - CPE1577 - ABC transporter 1578 32.79 +1 1848218..1849315 - 365 18310560 - CPE1578 - ABC transporter 1579 30.66 0 1849305..1850840 - 511 18310561 - CPE1579 - ABC transporter 1580 35.67 +1 1850981..1852093 - 370 18310562 - CPE1580 - membrane lipoprotein TmpC precursor 1581 27.13 0 1852647..1853468 - 273 18310563 - CPE1581 - lipase 1582 25.55 -1 1853950..1854771 - 273 18310564 - CPE1582 - hypothetical protein 1583 28.94 0 1854780..1856486 - 568 18310565 - CPE1583 - ABC transporter 1584 29.57 0 1856632..1857189 - 185 18310566 - CPE1584 - hypothetical protein 1585 30.46 0 1857409..1857861 + 150 18310567 - CPE1585 - rhodanese domain protein 1586 21.60 -2 1857907..1858230 - 107 18310568 - CPE1586 - hypothetical protein 1587 28.76 0 1858372..1861566 - 1064 18310569 pulB CPE1587 - pullulanase 1588 31.13 0 1861666..1863660 - 664 18310570 glgB CPE1588 - glycogen branching enzyme 1589 25.71 0 1863740..1864447 - 235 18310571 - CPE1589 - hypothetical protein 1590 28.79 0 1864689..1865459 + 256 18310572 - CPE1590 - hypothetical protein 1591 28.05 0 1865456..1865947 + 163 18310573 - CPE1591 - hypothetical protein 1592 26.82 0 1866140..1866907 - 255 18310574 - CPE1592 - hypothetical protein 1593 28.43 0 1867256..1868683 - 475 18310575 - CPE1593 - hypothetical protein 1594 19.25 -2 1868755..1868967 - 70 18310576 - CPE1594 - hypothetical protein 1595 25.31 -1 1869140..1869463 - 107 18310577 - CPE1595 - putative thioredoxin 1596 31.25 0 1869559..1870518 - 319 18310578 - CPE1596 - acetylxylan esterase 1597 29.05 0 1870960..1871823 + 287 18310579 - CPE1597 - hypothetical protein 1598 26.81 0 1871906..1872334 - 142 18310580 - CPE1598 - hypothetical protein 1599 28.69 0 1872446..1873027 - 193 18310581 thiE CPE1599 - thiamine monophosphate synthase family protein 1600 31.16 0 1873057..1874160 - 367 18310582 thiH CPE1600 - thiamine biosynthesis protein ThiH 1601 35.69 +1 1874173..1874937 - 254 18310583 thiG CPE1601 - thiazole synthase 1602 28.89 0 1875061..1875870 - 269 18310584 - CPE1602 - thiamine biosynthesis protein ThiF 29.13 MEAN 3.46 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.